SNP Profiles of "EQX 69 [EQX]"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
2. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
3. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
4. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
5. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
6. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
7. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
8. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
9. _GC-01-008-1-08
______GGGTAT___GG______CCTTCCCT___
10. _GC-01-8-1-8
______GGACAT___GG______GGAACCAG___
11. _1106_1
______GG___AT___________________________
12. _1106_2
______GG___AT___________________________
13. _1106_3
______GG___AT___________________________
14. _1106_12
______GG___AT___________________________
15. _1106_16
______GG___AT___________________________
16. _1106_10_>_F
______GG___AT___________________________
17. _1106_14_>_F
______GG___AT___________________________
18. _1106_7_>_FP
______GG___AT___________________________
19. _1106_9_>_FP
______GG___AT___________________________
20. _RUQ_100
TTCC_________TT___CCGG____________GG
21. _RUQ_100
______GGACAT___GG______GGAACCAG___
22. _RUQ_100
______________________________TTCC______
23. _RUQ_100
______GG___AT___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
2. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
3. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
4. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
5. _GC-01-008-1-08
______GGCTAAAG____________CCAAGGCT
6. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
7. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
8. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
9. _GC-01-008-1-08
___CCGGCTAAAG______AA___CCAAGGCT
10. _GC-01-8-1-8
___CCCCAGTTAG______AA___GGAAGGAG
11. _1106_1
___CCGGCT____________AA___CCAA___CT
12. _1106_2
___CCGGCT____________AA___CCAA___CT
13. _1106_3
___CCGGCT____________AA___CCAA___CT
14. _1106_12
___CCGGCT____________AA___CCAA___CT
15. _1106_16
___CCGGCT____________AA___CCAA___CT
16. _1106_10_>_F
___CCGGCT____________AA___CCAA___CT
17. _1106_14_>_F
___CCGGCT____________AA___CCAA___CT
18. _1106_7_>_FP
___CCGGCT____________AA___CCAA___CT
19. _1106_9_>_FP
______GGCT__________________CCAA___CT
20. _RUQ_100
AACC____________CTAG___GT___AA______
21. _RUQ_100
___CCCCAGTTAG______AA___GGAAGGAG
22. _RUQ_100
___CCGGCT___AG______AA___CCAA___CT
23. _RUQ_100
___CCGGCT____________AA___CCAA___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
2. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
3. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
4. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
5. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
6. _GC-01-008-1-08
______ATAA___GGAACCAA___GG___CGAG
7. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
8. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACGAG
9. _GC-01-008-1-08
______ATAA___GGAACCAA___GGAACG___
10. _GC-01-8-1-8
______ATAA___GGAAGGAA___GGAACG___
11. _1106_1
__________________AA_________GG______AG
12. _1106_2
__________________AA_________GG______AG
13. _1106_3
__________________AA_________GG______AG
14. _1106_12
__________________AA_________GG______AG
15. _1106_16
__________________AA_________GG_________
16. _1106_10_>_F
__________________AA_________GG______AG
17. _1106_14_>_F
__________________AA_________GG______AG
18. _1106_7_>_FP
__________________AA_________GG______AG
19. _1106_9_>_FP
__________________AA_________GG______AG
20. _RUQ_100
TTAA___AAAC____________CC____________
21. _RUQ_100
______ATAA___GGAAGGAA___GGAACG___
22. _RUQ_100
_________AA___GGAA_______________CCAG
23. _RUQ_100
__________________AA_________AG______AG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
2. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
3. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
4. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
5. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
6. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
7. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
8. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
9. _GC-01-008-1-08
______AC___CCTT___AAGTAGCG___CCCT
10. _GC-01-8-1-8
AA___AC___CC______AAACAGCG___CCAG
11. _1106_1
____________CCTT______GT___CG___CC___
12. _1106_2
____________CCTT______GT___CG___CC___
13. _1106_3
____________CCTT______GT___CG___CC___
14. _1106_12
____________CCTT______GT___CG___CC___
15. _1106_16
____________CCTT______GT___CG___CC___
16. _1106_10_>_F
____________CCTT______GT___CG___CC___
17. _1106_14_>_F
____________CCTT______GT___CG___CC___
18. _1106_7_>_FP
____________CCTT______GT___CG___CC___
19. _1106_9_>_FP
____________CCTT______GT___CG___CC___
20. _RUQ_100
___AC___CCCC___AG_________CGATCCCT
21. _RUQ_100
AA___AC___CC______AAACAGCG___CCAG
22. _RUQ_100
____________CC-______GT___CG___CCCT
23. _RUQ_100
____________CCCT______GT___CG___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
2. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
3. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
4. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
5. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
6. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
7. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
8. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
9. _GC-01-008-1-08
GGCT_________AAAA___AATTCTGGAG___
10. _GC-01-8-1-8
___AG____________AA___AA______CCAG___
11. _1106_1
___CT_________AA_______________GG______
12. _1106_2
___CT_________AA_______________GG______
13. _1106_3
___CT_________AA_______________GG______
14. _1106_12
___CT_________AA_______________GG______
15. _1106_16
___CT_________AA_______________GG______
16. _1106_10_>_F
___CT_________AA_______________GG______
17. _1106_14_>_F
___CT_________AA_______________GG______
18. _1106_7_>_FP
___CT_________AA_______________GG______
19. _1106_9_>_FP
___CT_________AA_______________GG______
20. _RUQ_100
______TTAGCCAA___CC______TTGGAGCC
21. _RUQ_100
___AG____________AA___AA______CCAG___
22. _RUQ_100
___CT________________________TTGGAG___
23. _RUQ_100
___CT_________AA_______________GG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
2. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
3. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
4. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
5. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
6. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
7. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
8. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
9. _GC-01-008-1-08
GTGTGT___AC___CC___CGCCCCCCAGCT
10. _GC-01-8-1-8
ACACAC___AC___GGGGCG___GGGGAGAG
11. _1106_1
________________________CG___CC______CT
12. _1106_2
________________________CG___CC______CT
13. _1106_3
________________________CG___CC______CT
14. _1106_12
________________________CG___CC______CT
15. _1106_16
________________________CG___CC______CT
16. _1106_10_>_F
________________________CG___CC______CT
17. _1106_14_>_F
________________________CG___CC______CT
18. _1106_7_>_FP
________________________CG___CC______CT
19. _1106_9_>_FP
________________________CG___CC______CT
20. _RUQ_100
_________TTACAACT___CG_________AG___
21. _RUQ_100
ACACAC___AC___GGGGCG___GGGGAGAG
22. _RUQ_100
______GT___AC_________CGCCCC___-___
23. _RUQ_100
________________________CG___CC______CT
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
2. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
3. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
4. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
5. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
6. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
7. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
8. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
9. _GC-01-008-1-08
GGCC___ATTTAGCC______TTCG___CTGG
10. _GC-01-8-1-8
GGGG___ATAAAG_________AA______AGGG
11. _1106_1
GG______ATTTAG__________________CTGG
12. _1106_2
GG______ATTTAG__________________CTGG
13. _1106_3
GG______ATTTAG__________________CTGG
14. _1106_12
GG______ATTTAG__________________CTGG
15. _1106_16
GG______ATTTAG__________________CTGG
16. _1106_10_>_F
GG______ATTTAG__________________CTGG
17. _1106_14_>_F
GG______ATTTAG__________________CTGG
18. _1106_7_>_FP
GG______ATTTAG__________________CTGG
19. _1106_9_>_FP
GG______ATTTAG__________________CTGG
20. _RUQ_100
______CG______AGCCTTAA______CC___GG
21. _RUQ_100
GGGG___ATAAAG_________AA______AGGG
22. _RUQ_100
_______________AGCC_______________CT___
23. _RUQ_100
GG______ATTTAG__________________CTGG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-01-008-1-08
GGAACT______TTCTTTCTCTGT______AC
2. _GC-01-008-1-08
GGAACTGG___TTCTTT___CTGT______AC
3. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
4. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
5. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
6. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
7. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
8. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
9. _GC-01-008-1-08
GGAACTGG___TTCTTTCTCTGT______AC
10. _GC-01-8-1-8
CCAAAGGG_________AAAG___AC_________
11. _1106_1
___AA____________CT______CT____________
12. _1106_2
___AA____________CT______CT____________
13. _1106_3
___AA____________CT______CT____________
14. _1106_12
___AA____________CT______CT____________
15. _1106_16
___AA____________CT______CT____________
16. _1106_10_>_F
___AA____________CT______CT____________
17. _1106_14_>_F
___AA____________CT______CT____________
18. _1106_7_>_FP
___AA____________CT______CT____________
19. _1106_9_>_FP
___AA____________CT______CT____________
20. _RUQ_100
____________TT___CT____________GTAA___
21. _RUQ_100
CCAAAGGG_________AAAG___AC_________
22. _RUQ_100
GG______GG___TT________________________
23. _RUQ_100
___AA____________CT______CT____________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
2. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
3. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
4. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
5. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
6. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
7. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
8. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
9. _GC-01-008-1-08
TTTT______TTCCAG______TTTTTTCGAA
10. _GC-01-8-1-8
AAAA______AACCAG______AAAAAACGAA
11. _1106_1
TTTT_________CC_________TT___TTCGAA
12. _1106_2
TTTT_________CC_________TT___TTCGAA
13. _1106_3
TTTT_________CC_________TT___TTCGAA
14. _1106_12
TTTT_________CC_________TT___TTCGAA
15. _1106_16
TTTT_________CC_________TT___TTCGAA
16. _1106_10_>_F
TTTT_________CC_________TT___TTCGAA
17. _1106_14_>_F
TTTT_________CC_________TT___TTCGAA
18. _1106_7_>_FP
TTTT_________CC_________TT___TTCGAA
19. _1106_9_>_FP
TTTT_________CC_________TT___TTCGAA
20. _RUQ_100
TT___GTTT_________AGGG_________CG___
21. _RUQ_100
AAAA______AACCAG______AAAAAACGAA
22. _RUQ_100
TT_________TT_______________TTTTCGAA
23. _RUQ_100
TTTT_________CC_________TT___TTCGAG
 127 128 129 130 131 132 133 134       
1. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
2. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
3. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
4. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
5. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
6. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
7. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
8. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
9. _GC-01-008-1-08
CT______ACGGAAAAACX_XX_XX_XX_XX_XX_X
10. _GC-01-8-1-8
AG______AC___AAAAACX_XX_XX_XX_XX_XX_X
11. _1106_1
CT_____________________X_XX_XX_XX_XX_XX_X
12. _1106_2
CT_____________________X_XX_XX_XX_XX_XX_X
13. _1106_3
CT_____________________X_XX_XX_XX_XX_XX_X
14. _1106_12
CT_____________________X_XX_XX_XX_XX_XX_X
15. _1106_16
CT_____________________X_XX_XX_XX_XX_XX_X
16. _1106_10_>_F
CT_____________________X_XX_XX_XX_XX_XX_X
17. _1106_14_>_F
CT_____________________X_XX_XX_XX_XX_XX_X
18. _1106_7_>_FP
CT_____________________X_XX_XX_XX_XX_XX_X
19. _1106_9_>_FP
CT_____________________X_XX_XX_XX_XX_XX_X
20. _RUQ_100
___TTAT_______________X_XX_XX_XX_XX_XX_X
21. _RUQ_100
AG______AC___AAAAACX_XX_XX_XX_XX_XX_X
22. _RUQ_100
________________________X_XX_XX_XX_XX_XX_X
23. _RUQ_100
CT_____________________X_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 1
Notes: 1
 Mars, 2018
2._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 2
Notes: 2
 Mars, 2018
3._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 3
Notes: 3
 Mars, 2018
4._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018
5._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018
6._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018
7._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 12
Notes: 12
 Mars, 2018
8._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018
9._EQX_69_[EQX] GC-01-008-1-08
Location: Tree: 16
Notes: 16
 Mars, 2018
10._EQX_69_[EQX] GC-01-8-1-8
Location: Field: 1, Block: 1, Rep: 6, Tree: 10 > FP2
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018
11._EQX_69_[EQX]
Location: 1106 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
12._EQX_69_[EQX]
Location: 1106 2
 Dapeng Zhang, 2016
13._EQX_69_[EQX]
Location: 1106 3
 Dapeng Zhang, 2016
14._EQX_69_[EQX]
Location: 1106 12
 Dapeng Zhang, 2016
15._EQX_69_[EQX]
Location: 1106 16
 Dapeng Zhang, 2016
16._EQX_69_[EQX]
Location: 1106 10 > F
 Dapeng Zhang, 2016
17._EQX_69_[EQX]
Location: 1106 14 > F
 Dapeng Zhang, 2016
18._EQX_69_[EQX]
Location: 1106 7 > FP
 Dapeng Zhang, 2016
19._EQX_69_[EQX]
Location: 1106 9 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

20._EQX_69_[EQX] RUQ 100
 Lambert Motilal, 2023
21._EQX_69_[EQX] RUQ 100
Notes: Reading_Collection
 Mars, 2018
22._EQX_69_[EQX] RUQ 100
 Dapeng Zhang, 2014
23._EQX_69_[EQX] RUQ 100
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129TcSNP1527 130Tcm001s00947643
131Tcm002s20575712 132Tcm003s01336581 133Tcm003s07402719 134Tcm006s26664133