SNP Profiles of SCA-11   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
1._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
2._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
3._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
4._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
5._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
6._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
7._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
8._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
9._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
10._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
11._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
12._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
13._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
14._GC-08-157-3-56
AT_CCCCAGAGTTTTCCTTAGTTTTTT
15._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTT_TT
16._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
17._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
18._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTT_TTTTTT
19._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
20._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
21._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
22._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
23._GC-08-157-3-56
ATCCCCCCAG_TTTTCCTTAGTTTTTT
24._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
25._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
26._SCA_11
ATCCCCCC____CCTTAG_TT_
27._SCA_11
ATCCCCCC____CCTTAG_TT_
28._SCA_11
ATCCCCCC____CCTTAG_TT_
29._SCA_11
ATCCCCCC____CCTTAG_TT_
30._SCA_11
ATCCCCCC____CCTTAG_TT_
31._SCA_11
ATCCCCCC____CCTTAG_TT_
32._SCA_11
ATCCCCCC____CCTTAG_TT_
33._SCA_11
ATCCCCCC____CCTTAG_TT_
34._SCA_11
ATCCCCCC____CCTTAG_TT_
35._SCA_11
ATCCCCCC____CCTTAG_TT_
36._SCA_11
ATCCCCCC____CCTTAG_TT_
37._SCA_11
ATCCCCCC____CCTTAG_TT_
38._SCA_11
ATCCCCCC____CCTTAG_TT_
39._SCA_11
ATCCCCCC____CCTTAG_TT_
40._SCA_11
ATCCCCCC____CCTTAG_TT_
41._SCA_11
ATCCCCCC____CCTTAG_TT_
42._SCA_11
ATCCCCCC____CCTTAG_TT_
43._SCA_11
ATCCCCCC____CCTTAG_TT_
44._SCA_11
ATCCCCCC____CCTTAG_TT_
45._SCA_11
ATCCCCCC____CCTTAG_TT_
46._SCA_11
ATCCCCCC____CCTTAG_TT_
47._SCA_11
ATCCCCCC____CCTTAG_TT_
48._SCA_11
ATCCCCCC____CCTT__TT_
49._SCA_11
ATCCCCCC____CCTTAG___
50._SCA_11
AT_CCCC____CCTTAG_TT_
51._SCA_11
ATCCCCCC____CCTTAG_TT_
52._RUQ_374
AACCCCCC____CCCTAA_TT_
53._SCA_11
AACCCCCC____CCTTAA_TT_
54._RUQ_374
__CCCC__CC_CC__TTTT_
55._RUQ_1686
ATCC_CCAGAG_AAGG_AGAAAAAA
56._RUQ_1686
___AA____CC___CT_
57._MITC-000057
AACC_CCGGAA_AAGG_AAAAAAAA
58._SCA_11
AAAATTCC____CTTTGG_CC_
 1516171819202122232425262728
_Input profile
ATAAAAGGCCCGCCCCAACTGGAAAAGG
1._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
2._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
3._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
4._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
5._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
6._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
7._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
8._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
9._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
10._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
11._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
12._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
13._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
14._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
15._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
16._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
17._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
18._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
19._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
20._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
21._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
22._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
23._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
24._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
25._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
26._SCA_11
___GG__CC____AAAA_
27._SCA_11
___GG__CC____AAAA_
28._SCA_11
___GG__CC____AAAA_
29._SCA_11
___GG__CC____AAAA_
30._SCA_11
___GG__CC____AAAA_
31._SCA_11
___GG__CC____AAAA_
32._SCA_11
___GG__CC____AAAA_
33._SCA_11
___GG__CC____AAAA_
34._SCA_11
___GG__CC____AAAA_
35._SCA_11
___GG__CC____AAAA_
36._SCA_11
___GG__CC____AAAA_
37._SCA_11
___GG__CC____AAAA_
38._SCA_11
___GG__CC____AAAA_
39._SCA_11
___GG__CC____AAAA_
40._SCA_11
___GG__CC____AAAA_
41._SCA_11
___GG__CC____AAAA_
42._SCA_11
___GG__CC____AAAA_
43._SCA_11
___GG__CC____AAAA_
44._SCA_11
___GG__CC____AAAA_
45._SCA_11
___GG__CC____AAAA_
46._SCA_11
___GG__CC____AAAA_
47._SCA_11
___GG__CC____AAAA_
48._SCA_11
___GG__CC____AAAA_
49._SCA_11
___GG__CC____AAAA_
50._SCA_11
___GG__CC____AAAA_
51._SCA_11
___GG__CC____AAAA_
52._RUQ_374
___GG__CC____AAAA_
53._SCA_11
___GG__CC____AAAA_
54._RUQ_374
_____GG____GG_AAGG
55._RUQ_1686
ATAAAAGGGG_CCGGAAAGGGAAAACC
56._RUQ_1686
__GG__GG_CT__GG_ATCC
57._MITC-000057
AAACAAGGGG_CCGGAGGGGGAAAA_
58._SCA_11
___AA__GG____TTAT_
 2930313233343536373839404142
_Input profile
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
1._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
2._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
3._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
4._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
5._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
6._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
7._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
8._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
9._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
10._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
11._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
12._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
13._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
14._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
15._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
16._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTT_AGCCGG
17._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
18._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
19._GC-08-157-3-56
_TTTTTTGGCGCCAAGGTTTTAGCCGG
20._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
21._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCC_
22._GC-08-157-3-56
CCTTTTTTGGCG_AAGGTTTTAGCCGG
23._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
24._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
25._GC-08-157-3-56
_TTTTTTGGCGCCAAGGTTTTAGCCGG
26._SCA_11
CCTT___CG_AAGG__AG__
27._SCA_11
CCTT___CG_AAGG__AG__
28._SCA_11
CCTT___CG_AAGG__AG__
29._SCA_11
CCTT___CG_AAGG__AG__
30._SCA_11
CCTT___CG_AAGG__AG__
31._SCA_11
CCTT___CG_AAGG__AG__
32._SCA_11
CCTT___CG_AAGG__AG__
33._SCA_11
CCTT___CG_AAGG__AG__
34._SCA_11
CCTT___CG_AAGG__AG__
35._SCA_11
CCTT___CG_AAGG__AG__
36._SCA_11
CCTT___CG_AAGG__AG__
37._SCA_11
CCTT___CG_AAGG__AG__
38._SCA_11
CCTT___CG_AAGG__AG__
39._SCA_11
CCTT___CG_AAGG__AG__
40._SCA_11
CCTT___CG_AAGG__AG__
41._SCA_11
CCTT___CG_AAGG__AG__
42._SCA_11
CCTT___CG_AAGG__AG__
43._SCA_11
CCTT___CG_AAGG__AG__
44._SCA_11
CCTT___CG_AAGG__AG__
45._SCA_11
CCTT___CG_AAGG__AG__
46._SCA_11
CCTT___CG_AAGG__AG__
47._SCA_11
_TT___CG_AAGG__AG__
48._SCA_11
CCTT___CG_AAGG__AG__
49._SCA_11
CCTT___CG_AAGG__AG__
50._SCA_11
CCTT___CG_AAGG__AG__
51._SCA_11
_TT___CG_AAGG__AG__
52._RUQ_374
CCTT___CC_AAGG__AG__
53._SCA_11
CCTT___CC_AAGG__AA__
54._RUQ_374
CC___AGCCCCAAGG__AACC_
55._RUQ_1686
GGTTAAAAGGCGCCAACCAAAAAGGGGG
56._RUQ_1686
GG___GGGG____TT_CC_
57._MITC-000057
GGTTAAAAAGCCCCAACCAAAAAAGGGG
58._SCA_11
CGAA___CC_AATT__AA__
 4344454647484950515253545556
_Input profile
CCGGTTTTGGAGAACCCCAAAAGGTTTT
1._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTTT
2._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
3._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
4._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTTT
5._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTTT
6._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTTT
7._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
8._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
9._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
10._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
11._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
12._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
13._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
14._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
15._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTTT
16._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
17._GC-08-157-3-56
CCGGTTTTGGAG_CCCCAAAAGGTTTT
18._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
19._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
20._GC-08-157-3-56
CCGGTTTTGGAG_CCCCAAAAGGTTTT
21._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
22._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
23._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
24._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGG_TT
25._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTTT
26._SCA_11
___TT_________TT
27._SCA_11
___TT_________TT
28._SCA_11
___TT_________TT
29._SCA_11
___TT_________TT
30._SCA_11
___TT_________TT
31._SCA_11
___TT_________TT
32._SCA_11
___TT_________TT
33._SCA_11
___TT_________TT
34._SCA_11
___TT_________TT
35._SCA_11
___TT_________TT
36._SCA_11
___TT_________TT
37._SCA_11
___TT_________TT
38._SCA_11
___TT_________TT
39._SCA_11
___TT_________TT
40._SCA_11
___TT_________TT
41._SCA_11
___TT_________TT
42._SCA_11
___TT_________TT
43._SCA_11
___TT_________TT
44._SCA_11
___TT_________TT
45._SCA_11
___TT_________TT
46._SCA_11
___TT_________TT
47._SCA_11
___TT_________TT
48._SCA_11
___TT_________TT
49._SCA_11
___TT_________TT
50._SCA_11
___TT_________TT
51._SCA_11
___TT_________TT
52._RUQ_374
___TT_________TT
53._SCA_11
___TT_________TT
54._RUQ_374
_GGTT__AA______CCTT
55._RUQ_1686
GGCC_AA_AGAAGG_AAAACCAGAA
56._RUQ_1686
__TT_AA________CC
57._MITC-000057
GGCC_AA_AAAAGG_AAAACCGGAA
58._SCA_11
___CC_________CT
 5758596061626364656667686970
_Input profile
CCTTAGCCCCTTCCCGGGAAAAGGAACT
1._GC-01-117-6-14
CCTTAGCCCCTTCCCGGGAAAAGGAACT
2._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
3._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
4._GC-01-117-6-14
CCTTAGCCCCTTCCCGGGAAAAGGAACT
5._GC-01-117-6-14
CCTTAGCCCCTTCCCGGGAAAAGGAACT
6._GC-01-117-6-14
CCTTAGCCCCTTCCCGGGAAAAGGAACT
7._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
8._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
9._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
10._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
11._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
12._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
13._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
14._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
15._GC-01-117-6-14
CCTTAGCCCCTTCCCGGGAAAAGGAACT
16._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
17._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
18._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
19._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
20._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
21._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
22._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
23._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
24._GC-01-117-6-14
CCTT_CCCCTTCCCGGGAAAAGGAACT
25._GC-08-157-3-56
CCTTAGCCCCTTCCCGGGAAAAGGAACT
26._SCA_11
CC__CC_TTCCCG_AAAAGG__
27._SCA_11
CC__CC_TTCCCG_AAAAGG__
28._SCA_11
CC__CC_TTCCCG_AAAAGG__
29._SCA_11
CC__CC_TTCCCG_AAAAGG__
30._SCA_11
CC__CC_TTCCCG_AAAAGG__
31._SCA_11
CC__CC_TTCCCG_AAAAGG__
32._SCA_11
CC__CC_TTCCCG_AAAAGG__
33._SCA_11
CC__CC_TTCCCG_AAAAGG__
34._SCA_11
CC__CC_TTCCCG_AAAAGG__
35._SCA_11
CC__CC_TTCCCG_AAAAGG__
36._SCA_11
CC__CC_TTCCCG_AAAAGG__
37._SCA_11
CC__CC_TTCCCG_AAAAGG__
38._SCA_11
CC__CC_TTCCCG_AAAAGG__
39._SCA_11
CC__CC_TTCCCG_AAAAGG__
40._SCA_11
CC__CC_TTCCCG_AAAAGG__
41._SCA_11
CC__CC_TTCCCG_AAAAGG__
42._SCA_11
CC__CC_TTCCCG_AAAAGG__
43._SCA_11
CC__CC_TTCCCG_AAAAGG__
44._SCA_11
CC__CC_TTCCCG_AAAAGG__
45._SCA_11
CC__CC_TTCCCG_AAAAGG__
46._SCA_11
CC__CC_TTCCCG_AAAAGG__
47._SCA_11
CC__CC_TTCCCG_AAAAGG__
48._SCA_11
CC__CC_TTCCCG_AAAAGG__
49._SCA_11
CC__CC_TTCCCG_AAAAGG__
50._SCA_11
CC__CC_TTCCCG_AAAAGG__
51._SCA_11
CC__CC_TTCCCG_AAAAGG__
52._RUQ_374
CC__CG_TTCCCG_ACAGGG__
53._SCA_11
CC__CG_TTCCCG_ACAGGG__
54._RUQ_374
_TT-CGCCTTCC_GGCCAGGGAA_
55._RUQ_1686
GGAAAGGGGGAACCCGGGAAAACCAA_
56._RUQ_1686
___CGCC_AA_GGACAG___
57._MITC-000057
GGAAAGCGGGAACCCGGGACAGCCAA_
58._SCA_11
CT__CC_CTACGG_CCAAGG__
 7172737475767778798081828384
_Input profile
CCAACTCCGGCCCCAAAACCCCAACCTT
1._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
2._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
3._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
4._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
5._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
6._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
7._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
8._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
9._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
10._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
11._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
12._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
13._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
14._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
15._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
16._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
17._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
18._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
19._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
20._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
21._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
22._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
23._GC-08-157-3-56
CCAACTCCGGCCCCAAAACCCCAACCTT
24._GC-01-117-6-14
CCAACTCCGGCCCCAAAACCCCAACCTT
25._GC-08-157-3-56
CCAA_CCGGCCCCAAAACCCCAACCTT
26._SCA_11
_AACT_____AACC___TT
27._SCA_11
_AACT_____AACC___TT
28._SCA_11
_AACT_____AACC___TT
29._SCA_11
_AACT_____AACC___TT
30._SCA_11
_AACT_____AACC___TT
31._SCA_11
_AACT_____AACC___TT
32._SCA_11
_AACT_____AACC___TT
33._SCA_11
_AACT_____AACC___TT
34._SCA_11
_AACT_____AACC___TT
35._SCA_11
_AACT_____AACC___TT
36._SCA_11
_AACT_____AACC___TT
37._SCA_11
_AACT_____AACC___TT
38._SCA_11
_AACT_____AACC___TT
39._SCA_11
_AACT_____AACC___TT
40._SCA_11
_AACT_____AACC___TT
41._SCA_11
_AACT_____AACC___TT
42._SCA_11
_AACT_____AACC___TT
43._SCA_11
_AACT_____AACC___TT
44._SCA_11
_AACT_____AACC___TT
45._SCA_11
_AACT_____AACC___TT
46._SCA_11
_AACT_____AACC___TT
47._SCA_11
_AACT_____AACC___TT
48._SCA_11
_AACT_____AACC___TT
49._SCA_11
_AACT_____AACC___TT
50._SCA_11
_AACT_____AACC___TT
51._SCA_11
_AA______AACC___TT
52._RUQ_374
_GGCC_____AACC___TT
53._SCA_11
_GGCC_____AACC___TT
54._RUQ_374
________AACC__CCTT
55._RUQ_1686
__AGCCGGCCCC_AAGGGGAACCAA
56._RUQ_1686
CG________GG____
57._MITC-000057
__GGCCGGCCCC_AAGGGGAACCAA
58._SCA_11
_AATT_____CCGG___CC
 85868788899091929394    
_Input profile
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
1._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
2._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
3._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
4._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
5._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
6._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
7._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
8._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
9._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
10._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
11._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
12._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
13._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
14._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
15._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
16._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
17._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
18._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
19._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
20._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
21._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
22._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
23._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
24._GC-01-117-6-14
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
25._GC-08-157-3-56
CCCCCCGGCCTTGGCCTTGGX_XX_XX_XX_X
26._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
27._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
28._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
29._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
30._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
31._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
32._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
33._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
34._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
35._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
36._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
37._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
38._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
39._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
40._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
41._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
42._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
43._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
44._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
45._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
46._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
47._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
48._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
49._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
50._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
51._SCA_11
CCCC_GG_TTGGCC__X_XX_XX_XX_X
52._RUQ_374
CCCC_GG_CTGTCT__X_XX_XX_XX_X
53._SCA_11
CCCC_GG_CTGTCT__X_XX_XX_XX_X
54._RUQ_374
___GGCCCTGT___X_XX_XX_XX_X
55._RUQ_1686
GG_GG__AACCGGAAGGX_XX_XX_XX_X
56._RUQ_1686
CT_________X_XX_XX_XX_X
57._MITC-000057
GG_GG__AGACAGAAGGX_XX_XX_XX_X
58._SCA_11
CTTT_AG_CTGGTT__X_XX_XX_XX_X

Input profile: SCA_11 GC-08-157-3-56

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._SCA_11 GC-01-117-6-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

3._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._SCA_11 GC-01-117-6-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP4
 Mars, 2018

5._SCA_11 GC-01-117-6-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

6._SCA_11 GC-01-117-6-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

7._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

11._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

12._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 20
Notes: 20
 Mars, 2018

13._SCA_11 GC-08-157-3-56

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 23
Notes: 23
 Mars, 2018

14._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._SCA_11 GC-01-117-6-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

16._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

18._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

19._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

20._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 19
Notes: 19
 Mars, 2018

21._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 24
Notes: 24
 Mars, 2018

22._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 25
Notes: 25
 Mars, 2018

23._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 26
Notes: 26
 Mars, 2018

24._SCA_11 GC-01-117-6-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

25._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

26._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 26
 Dapeng Zhang, 2016

27._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 25
 Dapeng Zhang, 2016

28._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 24
 Dapeng Zhang, 2016

29._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 23
 Dapeng Zhang, 2016

30._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 20
 Dapeng Zhang, 2016

31._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 19
 Dapeng Zhang, 2016

32._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 13
 Dapeng Zhang, 2016

33._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 1 > FP
 Dapeng Zhang, 2016

34._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 10 > F
 Dapeng Zhang, 2016

35._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 2 > FP
 Dapeng Zhang, 2016

36._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 3 > FP
 Dapeng Zhang, 2016

37._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 2
 Dapeng Zhang, 2016

38._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 3
 Dapeng Zhang, 2016

39._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 5
 Dapeng Zhang, 2016

40._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 6
 Dapeng Zhang, 2016

41._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 8
 Dapeng Zhang, 2016

42._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 9
 Dapeng Zhang, 2016

43._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 10
 Dapeng Zhang, 2016

44._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 11
 Dapeng Zhang, 2016

45._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 14
 Dapeng Zhang, 2016

46._SCA_11

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 4
 Dapeng Zhang, 2016

47._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 18
 Dapeng Zhang, 2016

48._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 15
 Dapeng Zhang, 2016

49._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

50._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 1
 Dapeng Zhang, 2016

51._SCA_11

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 13
 Dapeng Zhang, 2016

52._SCA_11 RUQ_374

83.3 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

53._SCA_11

83.3 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 639
 Dapeng Zhang, 2016

54._SCA_11 RUQ_374

81.7 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

55._SCA_11 RUQ_1686

51.3 %
80 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

56._SCA_11 RUQ_1686

50 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

57._SCA_11 MITC-000057

44.3 %
79 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

58._SCA_11

41 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240