SNP Profiles of GU261/P   View Data

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 Key

 1234567891011121314
_Input profile
CCGGCCCCTTCCTTTTCCCCAAGGCCGG
1._RUQ_1370
_GGCCCC___TT____CCGG
2._RUQ_1370
__CC____TT_CC_GG_GG
3._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
4._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
5._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
6._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
7._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
8._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
9._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
10._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
11._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
12._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
13._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
14._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
15._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
16._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
17._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
18._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
19._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
20._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
21._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
22._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
23._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
24._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
25._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
26._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
27._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
28._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
29._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
30._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
31._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
32._GU_261_/P
CC_CCCCTT_TTTTCCCCAAGGCCGG
33._GU_261_/P
CCGGCCCCTT_TTTTCCCCAAGGCCGG
34._GU_261_/P
CCGGCCCCTT_TTTTCCCC_GGCCGG
35._GU_261_/P
CCGGCCCCTTCCTTTTCCCCAAGGCCAG
36._GU_261_/P
CC_CCCCTT_TTGTCCCC_GGCCGG
37._RUQ_1370
__GG_________CC_
38._RUQ_1370
GGGGGGGGAACCAAAA__AAGGGGGG
 1516171819202122232425262728
_Input profile
CCAAGGCCCCGGGGAACCACCCGGCCAA
1._RUQ_1370
____CCGGGG_CCACCCGGCCAA
2._RUQ_1370
_____GGGGAA_ACCC__AA
3._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
4._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
5._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
6._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
7._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
8._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
9._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
10._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
11._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
12._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
13._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
14._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
15._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
16._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
17._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
18._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
19._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
20._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
21._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
22._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
23._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
24._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
25._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
26._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
27._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
28._GU_261_/P
_AAGGCCCCGGGGAGCCACCCGGCCAA
29._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
30._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
31._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCC_
32._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
33._GU_261_/P
CCAAGG_CCGGGGAGCCACCCGGCCAA
34._GU_261_/P
CCAAGGCC_GGGGAGCCACCCGGCCAA
35._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
36._GU_261_/P
CCAAGGCCCCGGGGAGCCACCCGGCCAA
37._RUQ_1370
CC___CCCC___ACCC___
38._RUQ_1370
GGAAGGGGGGCCCC_GGACCCCC_AA
 293031323334353637383940  
_Input profile
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
1._RUQ_1370
GG_AACCGGCCAATTTTAA__X_XX_X
2._RUQ_1370
____GG____AA__X_XX_X
3._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
4._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
5._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
6._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
7._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
8._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
9._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
10._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
11._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
12._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
13._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
14._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
15._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
16._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
17._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
18._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
19._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
20._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
21._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
22._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
23._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
24._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
25._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
26._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
27._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
28._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
29._GU_261_/P
GGGGAACCGGCCAA_TTAAAAGGX_XX_X
30._GU_261_/P
GGGGAACCGGCCAA_TTAAAAGGX_XX_X
31._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
32._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
33._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
34._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
35._GU_261_/P
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
36._GU_261_/P
GGGGAACCGGCCAC_TTAAAAGGX_XX_X
37._RUQ_1370
__AA_GGGGAATT_AA__X_XX_X
38._RUQ_1370
_GGAAGGGGGGAAAAAAAAAAGGX_XX_X

Input profile: GU_261_/P RUQ_1370

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

1._GU_261_/P RUQ_1370

identical
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._GU_261_/P RUQ_1370

identical
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 5
 Dapeng Zhang, 2016

4._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 4
 Dapeng Zhang, 2016

5._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 3
 Dapeng Zhang, 2016

6._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 2 > FP
 Dapeng Zhang, 2016

7._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 14 > F
 Dapeng Zhang, 2016

8._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 9
 Dapeng Zhang, 2016

9._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 1 > FP
 Dapeng Zhang, 2016

10._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 16
 Dapeng Zhang, 2016

11._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 12
 Dapeng Zhang, 2016

12._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 10
 Dapeng Zhang, 2016

13._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 9
 Dapeng Zhang, 2016

14._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 10
 Dapeng Zhang, 2016

15._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 3
 Dapeng Zhang, 2016

16._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 5
 Dapeng Zhang, 2016

17._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 6
 Dapeng Zhang, 2016

18._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 20
 Dapeng Zhang, 2016

19._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 19
 Dapeng Zhang, 2016

20._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 18
 Dapeng Zhang, 2016

21._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 17
 Dapeng Zhang, 2016

22._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 16
 Dapeng Zhang, 2016

23._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 15
 Dapeng Zhang, 2016

24._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 14
 Dapeng Zhang, 2016

25._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 13
 Dapeng Zhang, 2016

26._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 12
 Dapeng Zhang, 2016

27._GU_261_/P

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 11
 Dapeng Zhang, 2016

28._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 11 > F
 Dapeng Zhang, 2016

29._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 8
 Dapeng Zhang, 2016

30._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 6
 Dapeng Zhang, 2016

31._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 15
 Dapeng Zhang, 2016

32._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 8
 Dapeng Zhang, 2016

33._GU_261_/P

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 21
 Dapeng Zhang, 2016

34._GU_261_/P

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 7
 Dapeng Zhang, 2016

35._GU_261_/P

97.5 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y16
 Dapeng Zhang, 2016

36._GU_261_/P

95.8 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 2
 Dapeng Zhang, 2016

37._GU_261_/P RUQ_1370

76.9 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

38._GU_261_/P RUQ_1370

48.6 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25