SNP Profiles of "GU 261 /P"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _8112_8
GG___AA_______________AATT_________AA
2. _8112_13
GG___AA_______________AATTTT______AA
3. _8112_18
GG___AA_______________AATTTT______AA
4. _1408_6
GG___AA_______________AATTTT______AA
5. _1408_12
GG___AA_______________AATTTT______AA
6. _1408_14_>_F
GG___AA_______________AATTTT______AA
7. _8112_5
GG___AA_______________AATTTT______AA
8. _8112_11
GG___AA_______________AATTTT______AA
9. _8112_16
GG___AA_______________AATTTT______AA
10. _1408_3
GG___AA_______________AATTTT______AA
11. _8112_21
GG___AA_______________AATTTT______AA
12. _1408_9
GG___AA_______________AATTTT______AA
13. _1408_1_>_FP
GG___AA_______________AATTTT______AA
14. _8112_3
GG___AA_______________AATTTT______AA
15. _8112_9
GG___AA_______________AATTTT______AA
16. _8112_14
GG___AA_______________AATTTT______AA
17. _8112_19
GG___AA_______________AATTTT______AA
18. _1408_7
GG___AA_______________AATTTT______AA
19. _1408_15
GG___AA_______________AATTTT______AA
20. _1408_2_>_FP
GG___AA_______________AATTTT______AA
21. _8112_6
GG___AA_______________AATT_________AA
22. _8112_12
GG___AA_______________AATTTT______AA
23. _8112_17
GG___AA_______________AATTTT______AA
24. _1408_5
GG___AA_______________AATTTT______AA
25. _1408_10
GG___AA_______________AATTTT______AA
26. _1408_11_>_F
GG___AA_______________AATTTT______AA
27. _8112_4
GG___AA_______________AATTTT______AA
28. _8112_10
GG___AA_______________AATTTT______AA
29. _8112_15
GG___AA_______________AATTTT______AA
30. _8112_20
GG___AA_______________AATTTT______AA
31. _1408_8
GG___AA_______________AATTTT______AA
32. _1408_16
GG___AA_______________AATTTT______AA
33. _8112_2
GG___AA_______________AATT_________AC
34. _RUQ_1370
_______________TTCC___AATTTT___GGAA
35. _RUQ_1370
GGCCAAGGGGAACCAAAAAAAATTGGAA
36. _RUQ_1370
________________________AA___TT___GGAA
37. _RUQ_1370
GG___AA_______________AATTTT______AA
38. _CAMPUS_1_A_X2_Y16
GG___AA_______________AATTTT______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _8112_8
CCGG___CC_________AA______GG______GG
2. _8112_13
CCGG___CC_________AA______GG______GG
3. _8112_18
CCGG___CC_________AA______GG______GG
4. _1408_6
CCGG___CC_________AA______GG______GG
5. _1408_12
CCGG___CC_________AA______GG______GG
6. _1408_14_>_F
CCGG___CC_________AA______GG______GG
7. _8112_5
CCGG___CC_________AA______GG______GG
8. _8112_11
CCGG___CC_________AA______GG______GG
9. _8112_16
CCGG___CC_________AA______GG______GG
10. _1408_3
CCGG___CC_________AA______GG______GG
11. _8112_21
CCGG___CC_________AA______GG______GG
12. _1408_9
CCGG___CC_________AA______GG______GG
13. _1408_1_>_FP
CCGG___CC_________AA______GG______GG
14. _8112_3
CCGG___CC_________AA______GG______GG
15. _8112_9
CCGG___CC_________AA______GG______GG
16. _8112_14
CCGG___CC_________AA______GG______GG
17. _8112_19
CCGG___CC_________AA______GG______GG
18. _1408_7
CCGG___CC_________AA______GG______GG
19. _1408_15
CCGG___CC_________AA______GG______GG
20. _1408_2_>_FP
CCGG___CC_________AA______GG______GG
21. _8112_6
CCGG___CC_________AA______GG______GG
22. _8112_12
CCGG___CC_________AA______GG______GG
23. _8112_17
CCGG___CC_________AA______GG______GG
24. _1408_5
CCGG___CC_________AA______GG______GG
25. _1408_10
CCGG___CC_________AA______GG______GG
26. _1408_11_>_F
CCGG___CC_________AA______GG______GG
27. _8112_4
CCGG___CC_________AA______GG______GG
28. _8112_10
CCGG___CC_________AA______GG______GG
29. _8112_15
CCGG___CC_________AA______GG______GG
30. _8112_20
CCGG___CC_________AA______GG______GG
31. _1408_8
CCGG___CC_________AA______GG______GG
32. _1408_16
CCGG___CC_________AA______GG______GG
33. _8112_2
CCGG___CC_________AA______GG______GG
34. _RUQ_1370
CCGG___CC___GGGGAA____________CCGG
35. _RUQ_1370
GGGGGGGGTTGGGGAAAAGGGGTTGG___
36. _RUQ_1370
GGGG____________GGAATT_________CC___
37. _RUQ_1370
CCGG___CC_________AA______GG______GG
38. _CAMPUS_1_A_X2_Y16
CCGG___CC_________AA______GG______GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _8112_8
______AACC___GG___CCAC______CCAG___
2. _8112_13
______AACC___GG___CCAC______CCAG___
3. _8112_18
______AACC___GG___CCAC______CCAG___
4. _1408_6
______AACC___GG___CCAC______CCAG___
5. _1408_12
______AACC___GG___CCAC______CCAG___
6. _1408_14_>_F
______AACC___GG___CCAC______CCAG___
7. _8112_5
______AACC___GG___CCAC______CCAG___
8. _8112_11
______AACC___GG___CCAC______CCAG___
9. _8112_16
______AACC___GG___CCAC______CCAG___
10. _1408_3
______AACC___GG___CCAC______CCAG___
11. _8112_21
______AACC___GG___CCAC______CCAG___
12. _1408_9
______AACC___GG___CCAC______CCAG___
13. _1408_1_>_FP
______AACC___GG___CCAC______CCAG___
14. _8112_3
______AACC___GG___CCAC______CCAG___
15. _8112_9
______AACC___GG___CCAC______CCAG___
16. _8112_14
______AACC___GG___CCAC______CCAG___
17. _8112_19
______AACC___GG___CCAC______CCAG___
18. _1408_7
______AACC___GG___CCAC______CCAG___
19. _1408_15
_________CC___GG___CCAC______CCAG___
20. _1408_2_>_FP
______AACC___GG___CCAC______CCAG___
21. _8112_6
______AACC___GG___CCAC______CCAG___
22. _8112_12
______AACC___GG___CCAC______CCAG___
23. _8112_17
______AACC___GG___CCAC______CCAG___
24. _1408_5
______AACC___GG___CCAC______CCAG___
25. _1408_10
______AACC___GG___CCAC______CCAG___
26. _1408_11_>_F
______AACC___GG___CCAC______CCAG___
27. _8112_4
______AACC___GG___CCAC______CCAG___
28. _8112_10
______AACC___GG___CCAC______CCAG___
29. _8112_15
______AACC___GG___CCAC______CCAG___
30. _8112_20
______AACC___GG___CCAC______CCAG___
31. _1408_8
______AACC___GG___CCAC______CCAG___
32. _1408_16
______AACC___GG___CCAC______CCAG___
33. _8112_2
______AACC___GG___CCAC______CCAG___
34. _RUQ_1370
______AACC___GG___CCACCC___CC______
35. _RUQ_1370
AACCAA___GGCCGGCCACGG___GG___AG
36. _RUQ_1370
_____________________CCACCCAA_________
37. _RUQ_1370
______AACC___GG___CCAC______CCAA___
38. _CAMPUS_1_A_X2_Y16
______AACC___GG___CCAC______CCAG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _8112_8
______GG_____________________GG___CC___
2. _8112_13
______GG_____________________GG___CC___
3. _8112_18
______GG_____________________GG___CC___
4. _1408_6
______GG_____________________GG___CC___
5. _1408_12
______GG_____________________GG___CC___
6. _1408_14_>_F
______GG_____________________GG___CC___
7. _8112_5
______GG_____________________GG___CC___
8. _8112_11
______GG_____________________GG___CC___
9. _8112_16
______GG_____________________GG___CC___
10. _1408_3
______GG_____________________GG___CC___
11. _8112_21
______GG_____________________GG___CC___
12. _1408_9
______GG_____________________GG___CC___
13. _1408_1_>_FP
______GG_____________________GG___CC___
14. _8112_3
______GG_____________________GG___CC___
15. _8112_9
______GG_____________________GG___CC___
16. _8112_14
______GG_____________________GG___CC___
17. _8112_19
______GG_____________________GG___CC___
18. _1408_7
______GG_____________________GG_________
19. _1408_15
______GG_____________________GG___CC___
20. _1408_2_>_FP
______GG_____________________GG___CC___
21. _8112_6
______GG_____________________GG___CC___
22. _8112_12
______GG_____________________GG___CC___
23. _8112_17
______GG_____________________GG___CC___
24. _1408_5
______GG_____________________GG___CC___
25. _1408_10
______GG_____________________GG___CC___
26. _1408_11_>_F
______GG_____________________GG___CC___
27. _8112_4
______GG_____________________GG___CC___
28. _8112_10
______GG_____________________GG___CC___
29. _8112_15
______GG_____________________GG___CC___
30. _8112_20
______GG_____________________GG___CC___
31. _1408_8
______GG_____________________GG___CC___
32. _1408_16
______GG_____________________GG___CC___
33. _8112_2
______GG_____________________GG___CC___
34. _RUQ_1370
___CCGGAA______TTAA______GGCCCC___
35. _RUQ_1370
AA___CCAACCAAAAAACCGGCC___GGGG
36. _RUQ_1370
____________GG____________GGCCGGCC___
37. _RUQ_1370
______GG_____________________GG___CC___
38. _CAMPUS_1_A_X2_Y16
______GG_____________________GG___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _8112_8
___CCGG___AACCGG_________CCGG___AA
2. _8112_13
___CCGG___AACCGG_________CCGG___AA
3. _8112_18
___CCGG___AACCGG_________CCGG___AA
4. _1408_6
___CCGG___AACCGG_________CCGG___AA
5. _1408_12
___CCGG___AACCGG_________CCGG___AA
6. _1408_14_>_F
___CCGG___AACCGG_________CCGG___AA
7. _8112_5
___CCGG___AACCGG_________CCGG___AA
8. _8112_11
___CCGG___AACCGG_________CCGG___AA
9. _8112_16
___CCGG___AACCGG_________CCGG___AA
10. _1408_3
___CCGG___AACCGG_________CCGG___AA
11. _8112_21
______GG___AACCGG_________CCGG___AA
12. _1408_9
___CCGG___AACCGG_________CCGG___AA
13. _1408_1_>_FP
___CCGG___AACCGG_________CCGG___AA
14. _8112_3
___CCGG___AACCGG_________CCGG___AA
15. _8112_9
___CCGG___AACCGG_________CCGG___AA
16. _8112_14
___CCGG___AACCGG_________CCGG___AA
17. _8112_19
___CCGG___AACCGG_________CCGG___AA
18. _1408_7
___CCGG___AACCGG_________CCGG______
19. _1408_15
___CCGG___AACCGG_________CCGG___AA
20. _1408_2_>_FP
___CCGG___AACCGG_________CCGG___AA
21. _8112_6
___CCGG___AACCGG_________CCGG___AA
22. _8112_12
___CCGG___AACCGG_________CCGG___AA
23. _8112_17
___CCGG___AACCGG_________CCGG___AA
24. _1408_5
___CCGG___AACCGG_________CCGG___AA
25. _1408_10
___CCGG___AACCGG_________CCGG___AA
26. _1408_11_>_F
___CCGG___AA___GG_________CCGG___AA
27. _8112_4
___CCGG___AACCGG_________CCGG___AA
28. _8112_10
___CCGG___AACCGG_________CCGG___AA
29. _8112_15
___CCGG___AACCGG_________CCGG___AA
30. _8112_20
___CCGG___AACCGG_________CCGG___AA
31. _1408_8
___CCGG___AACCGG_________CCGG___AA
32. _1408_16
___CCGG___AACCGG_________CCGG___AA
33. _8112_2
___CCGG___AACCGG_________CCGG______
34. _RUQ_1370
-_______________GGCC______CC___GG___
35. _RUQ_1370
GGGGGGGGAAGGGG___AA___GGGGCCAA
36. _RUQ_1370
_______________CC_________CCCC_________
37. _RUQ_1370
___CCGG___AACCGG_________CCGG___AA
38. _CAMPUS_1_A_X2_Y16
___CCGG___AACCAG_________CCGG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _8112_8
_________CC______CC___TTTT_________TT
2. _8112_13
_________CC______CC___TTTT_________TT
3. _8112_18
_________CC______CC___TTTT_________TT
4. _1408_6
_________CC______CC___TTTT_________TT
5. _1408_12
_________CC______CC___TTTT_________TT
6. _1408_14_>_F
_________CC______CC___TTTT_________TT
7. _8112_5
_________CC______CC___TTTT_________TT
8. _8112_11
_________CC______CC___TTTT_________TT
9. _8112_16
_________CC______CC___TTTT_________TT
10. _1408_3
_________CC______CC___TTTT_________TT
11. _8112_21
_________CC______CC___TTTT_________TT
12. _1408_9
_________CC______CC___TTTT_________TT
13. _1408_1_>_FP
_________CC______CC___TTTT_________TT
14. _8112_3
_________CC______CC___TTTT_________TT
15. _8112_9
_________CC______CC___TTTT_________TT
16. _8112_14
_________CC______CC___TTTT_________TT
17. _8112_19
_________CC______CC___TTTT_________TT
18. _1408_7
_________CC______CC___TTTT_________TT
19. _1408_15
_________CC______CC___TTTT_________TT
20. _1408_2_>_FP
_________CC______CC___TTTT_________TT
21. _8112_6
_________CC______CC___TTTT_________TT
22. _8112_12
_________CC______CC___TTTT_________TT
23. _8112_17
_________CC______CC___TTTT_________TT
24. _1408_5
_________CC______CC___TTTT_________TT
25. _1408_10
_________CC______CC___TTTT_________TT
26. _1408_11_>_F
_________CC______CC___TTTT_________TT
27. _8112_4
_________CC______CC___TTTT_________TT
28. _8112_10
_________CC______CC___TTTT_________TT
29. _8112_15
_________CC______CC___TTTT_________TT
30. _8112_20
_________CC______CC___TTTT_________TT
31. _1408_8
_________CC______CC___TTTT_________TT
32. _1408_16
_________CC______CC___TTTT_________TT
33. _8112_2
_________CC______CC___GTTT_________TT
34. _RUQ_1370
___GGTT_______________TT___TT_________
35. _RUQ_1370
GGGG______AAGG___AAAAAAAACCGGAA
36. _RUQ_1370
___GGTT_________________________________
37. _RUQ_1370
_________CC______CC___TTTT___CC___TT
38. _CAMPUS_1_A_X2_Y16
_________CC______CC___TTTT___CC___TT
 85 86 87 88 89 90 91 92 93      
1. _8112_8
___CCCCGGCC____________X_XX_XX_XX_XX_X
2. _8112_13
___CCCCGGCC____________X_XX_XX_XX_XX_X
3. _8112_18
___CCCCGGCC____________X_XX_XX_XX_XX_X
4. _1408_6
___CCCCGGCC____________X_XX_XX_XX_XX_X
5. _1408_12
___CCCCGGCC____________X_XX_XX_XX_XX_X
6. _1408_14_>_F
___CCCCGGCC____________X_XX_XX_XX_XX_X
7. _8112_5
___CCCCGGCC____________X_XX_XX_XX_XX_X
8. _8112_11
___CCCCGGCC____________X_XX_XX_XX_XX_X
9. _8112_16
___CCCCGGCC____________X_XX_XX_XX_XX_X
10. _1408_3
___CCCCGGCC____________X_XX_XX_XX_XX_X
11. _8112_21
___CCCCGGCC____________X_XX_XX_XX_XX_X
12. _1408_9
___CCCCGGCC____________X_XX_XX_XX_XX_X
13. _1408_1_>_FP
___CCCCGGCC____________X_XX_XX_XX_XX_X
14. _8112_3
___CCCCGGCC____________X_XX_XX_XX_XX_X
15. _8112_9
___CCCCGGCC____________X_XX_XX_XX_XX_X
16. _8112_14
___CCCCGGCC____________X_XX_XX_XX_XX_X
17. _8112_19
___CCCCGGCC____________X_XX_XX_XX_XX_X
18. _1408_7
___CCCCGGCC____________X_XX_XX_XX_XX_X
19. _1408_15
___CCCCGGCC____________X_XX_XX_XX_XX_X
20. _1408_2_>_FP
___CCCCGGCC____________X_XX_XX_XX_XX_X
21. _8112_6
___CCCCGGCC____________X_XX_XX_XX_XX_X
22. _8112_12
___CCCCGGCC____________X_XX_XX_XX_XX_X
23. _8112_17
___CCCCGGCC____________X_XX_XX_XX_XX_X
24. _1408_5
___CCCCGGCC____________X_XX_XX_XX_XX_X
25. _1408_10
___CCCCGGCC____________X_XX_XX_XX_XX_X
26. _1408_11_>_F
___CCCCGGCC____________X_XX_XX_XX_XX_X
27. _8112_4
___CCCCGGCC____________X_XX_XX_XX_XX_X
28. _8112_10
___CCCCGGCC____________X_XX_XX_XX_XX_X
29. _8112_15
___CCCCGGCC____________X_XX_XX_XX_XX_X
30. _8112_20
___CCCCGGCC____________X_XX_XX_XX_XX_X
31. _1408_8
___CCCC___CC____________X_XX_XX_XX_XX_X
32. _1408_16
___CCCCGGCC____________X_XX_XX_XX_XX_X
33. _8112_2
___CCCC___CC____________X_XX_XX_XX_XX_X
34. _RUQ_1370
CCCCCCGG_______________X_XX_XX_XX_XX_X
35. _RUQ_1370
GGGGGGGGGGCCAAGGCCX_XX_XX_XX_XX_X
36. _RUQ_1370
CC___GG__________________X_XX_XX_XX_XX_X
37. _RUQ_1370
___CCCCGGCC____________X_XX_XX_XX_XX_X
38. _CAMPUS_1_A_X2_Y16
___CCCCGGCC____________X_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._GU_261_/P
Location: 8112 8
 Dapeng Zhang, 2016
2._GU_261_/P
Location: 8112 13
 Dapeng Zhang, 2016
3._GU_261_/P
Location: 8112 18
 Dapeng Zhang, 2016
4._GU_261_/P
Location: 1408 6
 Dapeng Zhang, 2016
5._GU_261_/P
Location: 1408 12
 Dapeng Zhang, 2016
6._GU_261_/P
Location: 1408 14 > F
 Dapeng Zhang, 2016
7._GU_261_/P
Location: 8112 5
 Dapeng Zhang, 2016
8._GU_261_/P
Location: 8112 11
 Dapeng Zhang, 2016
9._GU_261_/P
Location: 8112 16
 Dapeng Zhang, 2016
10._GU_261_/P
Location: 1408 3
 Dapeng Zhang, 2016
11._GU_261_/P
Location: 8112 21
 Dapeng Zhang, 2016
12._GU_261_/P
Location: 1408 9
 Dapeng Zhang, 2016
13._GU_261_/P
Location: 1408 1 > FP
 Dapeng Zhang, 2016
14._GU_261_/P
Location: 8112 3
 Dapeng Zhang, 2016
15._GU_261_/P
Location: 8112 9
 Dapeng Zhang, 2016
16._GU_261_/P
Location: 8112 14
 Dapeng Zhang, 2016
17._GU_261_/P
Location: 8112 19
 Dapeng Zhang, 2016
18._GU_261_/P
Location: 1408 7
 Dapeng Zhang, 2016
19._GU_261_/P
Location: 1408 15
 Dapeng Zhang, 2016
20._GU_261_/P
Location: 1408 2 > FP
 Dapeng Zhang, 2016
21._GU_261_/P
Location: 8112 6
 Dapeng Zhang, 2016
22._GU_261_/P
Location: 8112 12
 Dapeng Zhang, 2016
23._GU_261_/P
Location: 8112 17
 Dapeng Zhang, 2016
24._GU_261_/P
Location: 1408 5
 Dapeng Zhang, 2016
25._GU_261_/P
Location: 1408 10
 Dapeng Zhang, 2016
26._GU_261_/P
Location: 1408 11 > F
 Dapeng Zhang, 2016
27._GU_261_/P
Location: 8112 4
 Dapeng Zhang, 2016
28._GU_261_/P
Location: 8112 10
 Dapeng Zhang, 2016
29._GU_261_/P
Location: 8112 15
 Dapeng Zhang, 2016
30._GU_261_/P
Location: 8112 20
 Dapeng Zhang, 2016
31._GU_261_/P
Location: 1408 8
 Dapeng Zhang, 2016
32._GU_261_/P
Location: 1408 16
 Dapeng Zhang, 2016
33._GU_261_/P
Location: 8112 2
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

34._GU_261_/P RUQ 1370
 Dapeng Zhang, 2014
35._GU_261_/P RUQ 1370
Notes: Reading_Collection
 Mars, 2018
36._GU_261_/P RUQ 1370
 Jocelyn De Wever et al., 2019
37._GU_261_/P RUQ 1370
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

38._GU_261_/P
Location: CAMPUS 1 A X2 Y16
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1253 80TcSNP1270
81TcSNP1309 82TcSNP1350 83TcSNP1383 84TcSNP1414 85TcSNP1439
86TcSNP1442 87TcSNP1458 88TcSNP1484 89TcSNP1520 90Tcm001s00947643
91Tcm003s01336581 92Tcm003s07402719 93Tcm006s26664133