SNP Profiles of SCAVINA_6   View Data

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 1234567891011121314
_Input profile
CCCCGGCCAAAGGGCCATAAGGAGGGAA
1._RUQ_234
CCCCGGCCAAAGGGCCATAAGGAGGGAA
2._MITC-000343
CCCCGGCCAAAGGGCCATAAGGAGGGAA
3._MITC-000344
CCCCGGCCAAAGGGCCATAAGGAGGGAA
4._MITC-000347
CCCCGGCCAAAGGGCCATAAGGAGGGAA
5._MITC-000348
CCCCGGCCAAAGGGCCATAAGGAGGGAA
6._MITC-000349
CCCCGGCCAAAGGGCCATAAGGAGGGAA
7._MITC-000376
CCCCGGCCAAAGGGCCATAAGGAGGGAA
8._MITC-000452
CCCCGGCCAAAGGGCCATAAGGAGGGAA
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
CCACAGACAAGGAGCCATAGAGAAGGAC
10._SCA_6_Fld#_16_Plt#_1
CCACAGACAAGGAGCCATAGAGAAGGAC
11._RUQ_234B
______GG_______
12._SCA6
_____CT____GG___
13._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
14._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
15._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
16._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
17._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
18._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
19._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
20._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
21._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
22._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
23._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
24._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
25._GC-01-26-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
26._GC-01-026-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
27._GC-01-26-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
28._GC-01-26-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
29._SCA_6
_____CTGG_AT_____
30._GC-01-26-2-03
CCCCGGCCTTCTGGGGATTTGGCTCCTT
31._SCA_6
_____CTGG_AT_____
32._SCA_6
_____CTGG_AT_____
33._SCA_6
_____CTGG_AT_____
34._SCA_6
_____CTGG_AT_____
35._SCA_6
_____CTGG_AT_____
36._SCA_6
_____CTGG_AT_____
37._SCA_6
_____CTGG_AT_____
38._SCA_6
_____CTGG_AT_____
39._SCA_6
_____CTGG_AT_____
40._SCA_6
_____CTGG_AT_____
41._SCA_6
_____CTGG_AT_____
42._SCA_6
_____CTGG_AT_____
43._SCA_6
_____CTGG_AT_____
44._SCA_6
_____CTGG_AT_____
45._SCA_6
_____CTGG_AT_____
46._SCA_6
_____CTGG_AT_____
47._RUQ_234
_____CTGG_AT_____
48._SCA_6
_____CTGG_AT_____
49._SCA_6
_____CTGG_AT_____
50._SCA_6
_____CCGG_AT_____
51._SCA_6
_____CTGG_AT_____
52._SCA_6
_____CTGG_AT_____
53._SCA_6
_____CTGG_AT_____
54._RUQ_234
_____CT_GG__GG___
 1516171819202122232425262728
_Input profile
AACCAGGGCCAAGGGGACAGGGAGCCAA
1._RUQ_234
AACCAGGGCCAAGGGGACAGGGAGCCAA
2._MITC-000343
AACCAGGGCCAAGGGGACAGGGAGCCAA
3._MITC-000344
AACCAGGGCCAAGGGGACAGGGAGCCAA
4._MITC-000347
AACCAGGGCCAAGGGGACAGGGAGCCAA
5._MITC-000348
AACCAGGGCCAAGGGGACAGGGAGCCAA
6._MITC-000349
AACCAGGGCCAAGGGGACAGGGAGCCAA
7._MITC-000376
AACCAGGGCCAAGGGGACAGGGAGCCAA
8._MITC-000452
AACCAGGGCCAAGGGGACAGGGAGCCAA
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
AGACGGAGACAGAGAGAAGGCGAGACAG
10._SCA_6_Fld#_16_Plt#_1
AGACGGAGACAGAGAGAAGGCGAGACAG
11._RUQ_234B
_GG______AC_CC___
12._SCA6
_______CCCC_GG__TT
13._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
14._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
15._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
16._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
17._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
18._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
19._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
20._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
21._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
22._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
23._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
24._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
25._GC-01-26-2-03
TTGGCT_CCAA_CCACCTCCAGGGTT
26._GC-01-026-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
27._GC-01-26-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
28._GC-01-26-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
29._SCA_6
_GGCT_CC___ACCTCCAGGGTT
30._GC-01-26-2-03
TTGGCT_CCAACCCCACCTCCAGGGTT
31._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
32._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
33._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
34._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
35._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
36._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
37._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
38._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
39._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
40._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
41._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
42._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
43._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
44._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
45._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
46._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
47._RUQ_234
_GGCT_CC_CC_ACCTCCAGGGTT
48._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
49._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
50._SCA_6
_GGTT_CC_CC_ACTTCCAGGGTT
51._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
52._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
53._SCA_6
_GGCT_CC_CC_ACCTCCAGGGTT
54._RUQ_234
_GG_CC___CCCCCTCCAGGGTT
 2930313233343536373839404142
_Input profile
GGAAGGCCGGAAAGAGCCAAATAAAAGG
1._RUQ_234
GGAAGGCCGGAAAGAGCCAAATAAAAGG
2._MITC-000343
GGAAGGCCGGAAAGAGCCAAATAAAAGG
3._MITC-000344
GGAAGGCCGGAAAGAGCCAAATAAAAGG
4._MITC-000347
GGAAGGCCGGAAAGAGCCAAATAAAAGG
5._MITC-000348
GGAAGGCCGGAAAGAGCCAAATAAAAGG
6._MITC-000349
GGAAGGCCGGAAAGAGCCAAATAAAAGG
7._MITC-000376
GGAAGGCCGGAAAGAGCCAAATAAAAGG
8._MITC-000452
GGAAGGCCGGAAAGAGCCAAATAAAAGG
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
AGATGGACGGAAAGGGCGACATATAGGG
10._SCA_6_Fld#_16_Plt#_1
AGATGGACGGAAAGGGCGACATATAGGG
11._RUQ_234B
_____AA______AA_
12._SCA6
__GGCCGGAA_______GG
13._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
14._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
15._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
16._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
17._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
18._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
19._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
20._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
21._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
22._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
23._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAAAGG
24._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTAT_AAGG
25._GC-01-26-2-03
CCCCGGCCCCAACCCTCCTTATAAAAGG
26._GC-01-026-2-03
CCTTGGCCCCAAAGCTCCTTATAAGGGG
27._GC-01-26-2-03
CCCCGGCCCCAACCCTCCTTATAAAAGG
28._GC-01-26-2-03
CCCCGGCCCCAACCCTCCTTATAAAAGG
29._SCA_6
CC__CCCCAA_CTCC__AA__
30._GC-01-26-2-03
CCCCGGCCCCAACCCTCCTTATAA_GG
31._SCA_6
CC__CCCCAA_CTCC__AA__
32._SCA_6
CC__CCCCAA_CTCC__AA__
33._SCA_6
CC__CCCCAA_CTCC__AA__
34._SCA_6
CC__CCCCAA_CTCC__AA__
35._SCA_6
CC__CCCCAA_CTCC__AA__
36._SCA_6
CC__CCCCAA_CTCC__AA__
37._SCA_6
CC__CCCCAA_CTCC__AA__
38._SCA_6
CC__CCCCAA_CTCC__AA__
39._SCA_6
CC__CCCCAA_CTCC__AA__
40._SCA_6
CC__CCCCAA_CTCC__AA__
41._SCA_6
CC__CCCCAA_CTCC__AA__
42._SCA_6
CC__CCCCAA_CTCC__AA__
43._SCA_6
CC__CCCCAA_CTCC__AA__
44._SCA_6
CC__CCCCAA_CTCC__AA__
45._SCA_6
CC__CCCCAA_CTCC__AA__
46._SCA_6
CC__CCCCAA_TTCC__AA__
47._RUQ_234
CC__CCCCAA_CTCC__AA__
48._SCA_6
CC__CCCCAA_CTCC__AA__
49._SCA_6
CC__CCCCAA_CTCC__AA__
50._SCA_6
CC__CCCCAA_TTCC__AA__
51._SCA_6
CC__CCCCAA_CTCC__AA__
52._SCA_6
CC__CCCCAA_CTCC__AA__
53._SCA_6
CC__CCCCAA_CTCC_____
54._RUQ_234
__GGCCCCAA_CT____AAGG
 4344454647484950515253545556
_Input profile
AAGGAAAGAGAACCGGAAAAAACCGGCG
1._RUQ_234
AAGGAAAGAGAACCGGAAAAAACCGGCG
2._MITC-000343
AAGGAAAGAGAACCGGAAAAAACCGGCG
3._MITC-000344
AAGGAAAGAGAACCGGAAAAAACCGGCG
4._MITC-000347
AAGGAAAGAGAACCGGAAAAAACCGGCG
5._MITC-000348
AAGGAAAGAGAACCGGAAAAAACCGGCG
6._MITC-000349
AAGGAAAGAGAACCGGAAAAAACCGGCG
7._MITC-000376
AAGGAAAGAGAACCGGAAAAAACCGGCG
8._MITC-000452
AAGGAAAGAGAACCGGAAAAAACCGGCG
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
AAAGAGAGAGATCGAGACACAGACAGCG
10._SCA_6_Fld#_16_Plt#_1
AAAGAGAGAGATCGAGACACAGACAGCG
11._RUQ_234B
_________AA___CG
12._SCA6
AACC____GG______CG
13._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
14._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
15._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
16._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
17._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
18._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
19._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
20._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
21._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
22._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
23._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
24._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
25._GC-01-26-2-03
AACCAAAGAGAAGGCCAAAAAAGGGGCG
26._GC-01-026-2-03
AACCAAAGAGAAGG_AAAAAAGGGGCG
27._GC-01-26-2-03
AACCAAAGAGAAGGCCAAAAAAGGGGCG
28._GC-01-26-2-03
AACCAAAGAGAAGGCCAAAAAAGGGGCG
29._SCA_6
AA___AG____AA_GG_CG
30._GC-01-26-2-03
AACCAAAGAGAAGGCCAAAAAAGGGGCG
31._SCA_6
AA___AG____AA_GG_CG
32._SCA_6
AA___AG____AA_GG_CG
33._SCA_6
AA___AG____AA_GG_CG
34._SCA_6
AA___AG____AA_GG_CG
35._SCA_6
AA___AG____AA_GG_CG
36._SCA_6
AA___AG____AA_GG_CG
37._SCA_6
AA___AG____AA_GG_CG
38._SCA_6
AA___AG____AA_GG_CG
39._SCA_6
AA___AG____AA_GG_CG
40._SCA_6
AA___AG____AA_GG_CG
41._SCA_6
AA___AG____AA_GG_CG
42._SCA_6
AA___AG____AA_GG_CG
43._SCA_6
AA___AG____AA_GG_CG
44._SCA_6
AA___AG____AA_GG_CG
45._SCA_6
AA___AG____AA_GG_CG
46._SCA_6
AA___AG____AA_GG_CG
47._RUQ_234
AA___AG____AA_GG_CG
48._SCA_6
AA___AG____AA_GG_CG
49._SCA_6
AA___AG____AA_GG_CG
50._SCA_6
AA___AG____AA_GG_CG
51._SCA_6
AA___AG____AA_GG_CG
52._SCA_6
AA___AG____AA_GG_CG
53._SCA_6
AA___AG____AA_GG_CG
54._RUQ_234
AA_____GG__AA_GG_CG
 5758596061626364656667686970
_Input profile
CCGGGGAAAAAACCAAAAAACCAACCGG
1._RUQ_234
CCGGGGAAAAAACCAAAAAACCAACCGG
2._MITC-000343
CCGGGGAAAAAACCAAAAAACCAACCGG
3._MITC-000344
CCGGGGAAAAAACCAAAAAACCAACCGG
4._MITC-000347
CCGGGGAAAAAACCAAAAAACCAACCGG
5._MITC-000348
CCGGGGAAAAAACCAAAAAACCAACCGG
6._MITC-000349
CCGGGGAAAAAACCAAAAAACCAACCGG
7._MITC-000376
CCGGGGAAAAAACCAAAAAACCAACCGG
8._MITC-000452
CCGGGGAAAAAACCAAAAAACCAACCGG
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
ACGGAGAAAGAACCAGAAAAACAAACCG
10._SCA_6_Fld#_16_Plt#_1
ACGGAGAAAGAACCAGAAAAACAAACCG
11._RUQ_234B
CC_CC___GGAA____CCCC
12._SCA6
CC_CC______TT____
13._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
14._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
15._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
16._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
17._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
18._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
19._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
20._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
21._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
22._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
23._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
24._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
25._GC-01-26-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
26._GC-01-026-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
27._GC-01-26-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
28._GC-01-26-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
29._SCA_6
CC__TT__GG_______
30._GC-01-26-2-03
CCCCCCTTAAAAGGAATTTTGGTTCCCC
31._SCA_6
CC__TT__GG_______
32._SCA_6
CC__TT__GG_______
33._SCA_6
CC__TT__GG_______
34._SCA_6
CC__TT__GG_______
35._SCA_6
CC__TT__GG_______
36._SCA_6
CC__TT__GG_______
37._SCA_6
CC__TT__GG_______
38._SCA_6
CC__TT__GG_______
39._SCA_6
CC__TT__GG_______
40._SCA_6
CC__TT__GG_______
41._SCA_6
CC__TT__GG_______
42._SCA_6
CC__TT__GG_______
43._SCA_6
CC__TT__GG_______
44._SCA_6
CC__TT__GG_______
45._SCA_6
CC__TT__GG_______
46._SCA_6
CC__TT__GG_______
47._RUQ_234
CC__TT__GG_______
48._SCA_6
CC__TT__GG_______
49._SCA_6
CC__TT__GG_______
50._SCA_6
CC__TT__GG_______
51._SCA_6
CC__TT__GG_______
52._SCA_6
CC__TT__GG_______
53._SCA_6
CC__TT__GG_______
54._RUQ_234
CC_CCTT__GGAATT__TTCC_
 717273747576777879808182  
_Input profile
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
1._RUQ_234
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
2._MITC-000343
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
3._MITC-000344
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
4._MITC-000347
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
5._MITC-000348
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
6._MITC-000349
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
7._MITC-000376
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
8._MITC-000452
AAGGAACGGGCCGGCCGGTTGGAAX_XX_X
9._SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6
AGCGAGGGAGCCAGCCGGATAGAGX_XX_X
10._SCA_6_Fld#_16_Plt#_1
AGCGAGGGAGCCAGCCGGATAGAGX_XX_X
11._RUQ_234B
_CC__GG______AAX_XX_X
12._SCA6
AAGGTT_______CC_X_XX_X
13._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
14._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
15._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
16._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
17._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
18._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
19._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
20._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
21._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
22._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
23._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
24._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
25._GC-01-26-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
26._GC-01-026-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
27._GC-01-26-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
28._GC-01-26-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
29._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
30._GC-01-26-2-03
AACCTTCGGGCCCCCCCCTTCCAAX_XX_X
31._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
32._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
33._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
34._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
35._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
36._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
37._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
38._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
39._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
40._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
41._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
42._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
43._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
44._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
45._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
46._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
47._RUQ_234
_CCTT___CCCC_TTCCAAX_XX_X
48._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
49._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
50._SCA_6
_CCTT___CTCC_TTCCAAX_XX_X
51._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
52._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
53._SCA_6
_CCTT___CCCC_TTCCAAX_XX_X
54._RUQ_234
_CCTT_-CC_____AAX_XX_X

Input profile: SCA_6 MITC-000345

 
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USDA-SHRS, United States of America
 Mars, 2018

1._SCA_6 RUQ_234

identical
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._SCA_6 MITC-000343

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

3._SCA_6 MITC-000344

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

4._SCA_6 MITC-000347

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

5._SCA_6 MITC-000348

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

6._SCA_6 MITC-000349

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

7._SCA_6 MITC-000376

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

8._SCA_6 MITC-000452

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

9._SCA_6 SCA_6_TC_(Penn_State)_Fld#_197_Plt#_6

65.9 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 197, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

10._SCA_6 SCA_6_Fld#_16_Plt#_1

65.9 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 16, Tree: 1
 Mars, 2018

11._SCA_6 RUQ_234B

64.7 %
17 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

12._SCA_6 SCA6

56.8 %
22 shared markers

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Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

13._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

16._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

17._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

19._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

20._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

21._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

22._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

23._SCA_6 GC-01-026-2-03

52.5 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: Dead
 Mars, 2018

24._SCA_6 GC-01-026-2-03

51.9 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

25._SCA_6 GC-01-26-2-03

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

26._SCA_6 GC-01-026-2-03

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

27._SCA_6 GC-01-26-2-03

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL16
Notes: PL16 FP4
 Mars, 2018

28._SCA_6 GC-01-26-2-03

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL7
Notes: PL7 FP3
 Mars, 2018

29._SCA_6

50 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 1 > FP
 Dapeng Zhang, 2016

30._SCA_6 GC-01-26-2-03

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 3, Tree: PL11
Notes: PL11 FP2
 Mars, 2018

31._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 9
 Dapeng Zhang, 2016

32._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 16 > F
 Dapeng Zhang, 2016

33._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 11 > F
 Dapeng Zhang, 2016

34._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 14
 Dapeng Zhang, 2016

35._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 13
 Dapeng Zhang, 2016

36._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 10
 Dapeng Zhang, 2016

37._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 7 > FP
 Dapeng Zhang, 2016

38._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 8
 Dapeng Zhang, 2016

39._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 6
 Dapeng Zhang, 2016

40._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 5
 Dapeng Zhang, 2016

41._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 4
 Dapeng Zhang, 2016

42._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 3
 Dapeng Zhang, 2016

43._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 2
 Dapeng Zhang, 2016

44._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

45._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 2
 Dapeng Zhang, 2016

46._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

47._SCA_6 RUQ_234

48.6 %
35 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

48._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P75 279
 Dapeng Zhang, 2016

49._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P76 278
 Dapeng Zhang, 2016

50._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Indonesian Coffee and Cocoa Research Institute (ICCRI), Indonesia
Location: KW 268 I-022
 Dapeng Zhang, 2016

51._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
Malaysian Cocoa Board (MCB), Malaysia
Location: C0267
 Dapeng Zhang, 2016

52._SCA_6

48.6 %
35 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 644
 Dapeng Zhang, 2016

53._SCA_6

47.1 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1203 15
 Dapeng Zhang, 2016

54._SCA_6 RUQ_234

43.1 %
36 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998