SNP Profiles of EET19[ECU]   View Data

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_Input profile
CGCTATGGCCCCTTCTCGCCAAGTAACT
1._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
2._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
3._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
4._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
5._GC-05-184-4-37
CGCTATGGCCCCTTCTCGGGAAGTAACT
6._GC-05-184-4-37
CGCTATGGCCCCTTCTCGGGAAGTAACT
7._GC-05-184-4-37
CGCTATGGCCCCTTCTCGGGAAGTAACT
8._GC-05-184-4-37
CGCTATGGCCCCTTCTCGGGAAGTAACT
9._GC-05-184-4-37
CGCTATGGCCCCTTCTCGGGAAGTAACT
10._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
11._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
12._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
13._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
14._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
15._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
16._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
17._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGTAACT
18._GC-08-085-2-08
CGCTATGGCCCCTTCTCGGGAAGT_CT
19._RUQ_1630
CGCTATGGCC__TTCGGG___CT
20._RUQ_1630
CG________GG___CT
21._EET_19_[ECU]
CG___CC_TTCT_GG____
22._EET_19_[ECU]
CG___CC_TTCT_GG____
23._EET_19_[ECU]
CG___CC_TTCT_GG____
24._EET_19_[ECU]
CG___CC_TTCT_GG____
25._EET_19_[ECU]
CG___CC_TTCT_GG____
26._EET_19_[ECU]
CG___CC_TTCT_GG____
27._EET_19_[ECU]
CG___CC_TTCT_GG____
28._EET_19_[ECU]
CG___CC_TTCT_GG____
29._EET_19_[ECU]
CG___CC_TTCT_GG____
30._EET_19_[ECU]
CG___CC_TTCT_GG____
31._EET_19_[ECU]
CG___CC_TTCT_GG____
32._EET_19_[ECU]
CG___CC_TTCT_GG____
33._EET_19_[ECU]
CG___CC_TTCT_GG____
34._EET_19_[ECU]
CG___CC_TTCT_GG____
35._EET_19_[ECU]
CG___CC_TTCT_GG____
36._EET_19_[ECU]
CG___CC_TTCT_GG____
37._EET_19_[ECU]
CG___CC_TTCT_GG____
38._EET_19_[ECU]
CG___CC_TTCT_GG____
39._EET_19_[ECU]
CG___CC_TTCT_GG____
40._RUQ_1630
CG___CC_TTCT_GG____
41._EET_19_[ECU]
CG___CC_TTCT_GG____
42._MITC-000062
CGGG_GGGG_AGAG_CGAGAC_GG
 151617181920212223242526  
_Input profile
CCCGCCCCATGGAGGGCCGGCTCCX_XX_X
1._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
2._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
3._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
4._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
5._GC-05-184-4-37
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
6._GC-05-184-4-37
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
7._GC-05-184-4-37
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
8._GC-05-184-4-37
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
9._GC-05-184-4-37
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
10._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
11._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
12._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
13._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
14._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
15._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
16._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
17._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
18._GC-08-085-2-08
CCCGCCCCATGGAGCCCCGGCTCCX_XX_X
19._RUQ_1630
CCCGCC_ATGGAGCCCCGGCTCCX_XX_X
20._RUQ_1630
CCCG____AG____CCX_XX_X
21._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
22._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
23._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
24._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
25._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
26._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
27._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
28._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
29._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
30._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
31._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
32._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
33._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
34._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
35._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
36._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
37._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
38._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
39._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
40._RUQ_1630
CCCG__AT_AGCCCC_CTCCX_XX_X
41._EET_19_[ECU]
CCCG__AT_AGCCCC_CTCCX_XX_X
42._MITC-000062
CCCGGGGGATAGAACGCCAGAACCX_XX_X

Input profile: EET_19_[ECU] RUQ_1630

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

1._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

4._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

5._EET_19_[ECU] GC-05-184-4-37

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._EET_19_[ECU] GC-05-184-4-37

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

7._EET_19_[ECU] GC-05-184-4-37

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._EET_19_[ECU] GC-05-184-4-37

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

9._EET_19_[ECU] GC-05-184-4-37

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

11._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

13._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

15._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

16._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

17._EET_19_[ECU] GC-08-085-2-08

92.3 %
26 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._EET_19_[ECU] GC-08-085-2-08

92 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

19._EET_19_[ECU] RUQ_1630

87.5 %
20 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

20._EET_19_[ECU] RUQ_1630

85.7 %
7 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

21._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5437 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

22._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5437 3
 Dapeng Zhang, 2016

23._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 13
 Dapeng Zhang, 2016

24._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 12
 Dapeng Zhang, 2016

25._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 11
 Dapeng Zhang, 2016

26._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 10
 Dapeng Zhang, 2016

27._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 9
 Dapeng Zhang, 2016

28._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 8
 Dapeng Zhang, 2016

29._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 7
 Dapeng Zhang, 2016

30._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 6
 Dapeng Zhang, 2016

31._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 5
 Dapeng Zhang, 2016

32._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 4
 Dapeng Zhang, 2016

33._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 3
 Dapeng Zhang, 2016

34._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 2
 Dapeng Zhang, 2016

35._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8208 1
 Dapeng Zhang, 2016

36._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5437 4 > FP
 Dapeng Zhang, 2016

37._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5437 2 > FP
 Dapeng Zhang, 2016

38._EET_19_[ECU]

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5437 5
 Dapeng Zhang, 2016

39._EET_19_[ECU]

84.6 %
13 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

40._EET_19_[ECU] RUQ_1630

84.6 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

41._EET_19_[ECU]

84.6 %
13 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F462 T9
 Dapeng Zhang, 2016

42._EET_19_[ECU] MITC-000062

45.5 %
22 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144