SNP Profiles of "NA 33"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-6-1-06
______GGGTTT___AG______CCTTCCTT___
2. _GC-01-6-1-06
______GGGTTT___AG______CCTTCC______
3. _GC-01-6-1-06
______GGGTTT___AG______CC___CCTT___
4. _GC-01-6-1-06
______GGGTTT___AG______CCTTCCTT___
5. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
6. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
7. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
8. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
9. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
10. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
11. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
12. _GC-01-006-1-06
______GGGTTT___AG______CCTTCCTT___
13. _Tree:_FP_4
______GGACTT___AG______GGAACCAA___
14. _GC-01-6-1-6
______GGACTT___AG______GGAACCAA___
15. _1104_1_>_FP
______GG___TT___________________________
16. _1104_10_>_F
______GG___TT___________________________
17. _1104_11_>_F
______GG___TT___________________________
18. _1104_12_>_F
______GG___TT___________________________
19. _1104_14_>_F
______GG___TT___________________________
20. _1104_15_>_F
______GG___TT___________________________
21. _1104_16_>_F
______GG___TT___________________________
22. _1104_2_>_FP
______GG___TT___________________________
23. _1104_3_>_FP
______GG___TT___________________________
24. _1104_6_>_FP
______GG___TT___________________________
25. _1104_7_>_FP
______GG___TT___________________________
26. _1104_9_>_FP
______GG___TT___________________________
27. _NA33
__________________________________________
28. _RUQ_1577
CTCC_________TT___CCGG____________GT
29. _RUQ_1577
______GGACTT___GG______GGAACCAA___
30. _RUQ_1577
______________________________TTCC______
31. _RUQ_1577
______GG___TT___________________________
32. _M6_18,_19
______GG___AT___________________________
33. _KW_397_I-032
______GG___TT___________________________
34. _Row_24_C0211_44
______GG___TT___________________________
35. _4A_D371_T2
______GG___TT___________________________
36. _MITC-000715
______GGACTT___AG______GGAACCAA___
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-6-1-06
___ACGGCT___GG______AC___CCGG___CT
2. _GC-01-6-1-06
___ACGGCT___GG______AC___CCGG___CT
3. _GC-01-6-1-06
___ACGGCT___GG______AC___CCGG___CT
4. _GC-01-6-1-06
___ACGGCT___GG______AC___CCGG___CT
5. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
6. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
7. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
8. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
9. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
10. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
11. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
12. _GC-01-006-1-06
___ACGGCTTTGG______AC___CCGGGGCT
13. _Tree:_FP_4
___ACCCAGAAGG______AC___GGGGGGAG
14. _GC-01-6-1-6
___ACCCAGAAGG______AC___GGGGGGAG
15. _1104_1_>_FP
___ACGGCT____________AC___CCGG___CT
16. _1104_10_>_F
___ACGGCT____________AC___CCGG___CT
17. _1104_11_>_F
___ACGGCT____________AC___CCGG___CT
18. _1104_12_>_F
___ACGGCT____________AC___CCGG___CT
19. _1104_14_>_F
___ACGGCT____________AC___CCGG___CT
20. _1104_15_>_F
___ACGGCT____________AC___CCGG___CT
21. _1104_16_>_F
___ACGGCT____________AC___CCGG___CT
22. _1104_2_>_FP
___ACGGCT____________AC___CCGG___CT
23. _1104_3_>_FP
___ACGGCT____________AC___CCGG___CT
24. _1104_6_>_FP
___ACGGCT____________AC___CCGG___CT
25. _1104_7_>_FP
___ACGGCT____________AC___CCGG___CT
26. _1104_9_>_FP
___ACGGCT____________AC___CCGG___CT
27. _NA33
___AC___CT___GG______AC___GGGG______
28. _RUQ_1577
ATCC____________CCAG___GG___AG______
29. _RUQ_1577
___CCCCGGATGG______AC___CGAGGGAG
30. _RUQ_1577
___CCGGCC___GG______AC___CGAG___CT
31. _RUQ_1577
___CCGGCC____________AC___CGAG___CT
32. _M6_18,_19
___ACGGCT____________AA___CGAG___TT
33. _KW_397_I-032
___ACGGCT____________AC___CCGG___CT
34. _Row_24_C0211_44
___ACGGCT____________AC___CCGG___CT
35. _4A_D371_T2
___CCGGCC____________AC___GGAG___CT
36. _MITC-000715
___ACCCAGAAGG______AC___GGGGGGAG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-6-1-06
______AAGG___GGATCCAG___GGAACGAG
2. _GC-01-6-1-06
______AAGG___GGATCCAG___GGAACGAG
3. _GC-01-6-1-06
______AAGG___GGATCCAG___GGAACGAG
4. _GC-01-6-1-06
______AAGG___GGATCCAG___GGAACGAG
5. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
6. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
7. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
8. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
9. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
10. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
11. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
12. _GC-01-006-1-06
______AAGG___GGATCCAG___GGAACGAG
13. _Tree:_FP_4
______TTGG___GGATGGAG___GGAACG___
14. _GC-01-6-1-6
______TTGG___GGATGGAG___GGAACG___
15. _1104_1_>_FP
__________________AT_________GG______AG
16. _1104_10_>_F
__________________AT_________GG______AG
17. _1104_11_>_F
__________________AT_________GG______AG
18. _1104_12_>_F
__________________AT_________GG______AG
19. _1104_14_>_F
__________________AT_________GG______AG
20. _1104_15_>_F
__________________AT_________GG______AG
21. _1104_16_>_F
__________________AT_________GG______AG
22. _1104_2_>_FP
__________________AT_________GG______AG
23. _1104_3_>_FP
__________________AT_________GG______AG
24. _1104_6_>_FP
__________________AT_________GG______AG
25. _1104_7_>_FP
__________________AT_________GG______AG
26. _1104_9_>_FP
__________________AT_________GG______AG
27. _NA33
_______________GGATCC____________CG___
28. _RUQ_1577
CTAA___GGAC____________CC____________
29. _RUQ_1577
______TTGG___GGAAGGAG___GGAAGG___
30. _RUQ_1577
_________GG___GGAA_______________CCAA
31. _RUQ_1577
__________________AA_________GG______AA
32. _M6_18,_19
__________________AT_________GG______AA
33. _KW_397_I-032
__________________AT_________GG______AG
34. _Row_24_C0211_44
__________________AT_________GG______AG
35. _4A_D371_T2
__________________AA_________GG______AA
36. _MITC-000715
______TTGG___GGATGGAG___GGAACG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-6-1-06
CT___AA___CCCT___AGGGGGGG___ACCC
2. _GC-01-6-1-06
CT___AA___CCCT___AGGGGGGG___ACCC
3. _GC-01-6-1-06
CT___AA___CCCT___AGGGGGGG___ACCC
4. _GC-01-6-1-06
CT___AA___CCCT___AGGGGGGG___ACCC
5. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
6. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
7. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
8. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
9. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
10. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
11. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
12. _GC-01-006-1-06
______AA___CCCT___AGGGGGGG___ACCC
13. _Tree:_FP_4
AG___AA___CC______AGCCGGGG___ACGG
14. _GC-01-6-1-6
AG___AA___CC______AGCCGGGG___ACGG
15. _1104_1_>_FP
____________CCCT______GG___GG___AC___
16. _1104_10_>_F
____________CCCT______GG___GG___AC___
17. _1104_11_>_F
____________CCCT______GG___GG___AC___
18. _1104_12_>_F
____________CCCT______GG___GG___AC___
19. _1104_14_>_F
____________CCCT______GG___GG___AC___
20. _1104_15_>_F
____________CCCT______GG___GG___AC___
21. _1104_16_>_F
____________CCCT______GG___GG___AC___
22. _1104_2_>_FP
____________CCCT______GG___GG___AC___
23. _1104_3_>_FP
____________CCCT______GG___GG___AC___
24. _1104_6_>_FP
____________CCCT______GG___GG___AC___
25. _1104_7_>_FP
____________CCCT______GG___GG___AC___
26. _1104_9_>_FP
____________CCCT______GG___GG___AC___
27. _NA33
______________________________GG___ACCC
28. _RUQ_1577
___AC___CCCC___AA_________GGATAACC
29. _RUQ_1577
AG___AC___CC______AGCCGGGG___AAGG
30. _RUQ_1577
____________CCCT______GG___GG___AACC
31. _RUQ_1577
____________CCCT______GG___GG___AA___
32. _M6_18,_19
____________CCCT______GG___GG___AA___
33. _KW_397_I-032
____________CCCT______GG___GG___AC___
34. _Row_24_C0211_44
____________CCCT______GG___GG___AC___
35. _4A_D371_T2
____________CCCT______GG___GG___AA___
36. _MITC-000715
AG___AA___CC______AGCCGGGG___ACGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-6-1-06
AACT_________AAAA___AATTCTGGGG___
2. _GC-01-6-1-06
AACT_________AAAA___AATTCTGGGG___
3. _GC-01-6-1-06
AACT_________AAAA___AATTCTGGGG___
4. _GC-01-6-1-06
AACT_________AAAA___AATTCTGGGG___
5. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
6. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
7. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
8. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
9. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
10. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
11. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
12. _GC-01-006-1-06
AACT_________AAAA___AATTCTGGGG___
13. _Tree:_FP_4
___AG____________AA___AA______CCGG___
14. _GC-01-6-1-6
___AG____________AA___AA______CCGG___
15. _1104_1_>_FP
___CT_________AA_______________GG______
16. _1104_10_>_F
___CT_________AA_______________GG______
17. _1104_11_>_F
___CT_________AA_______________GG______
18. _1104_12_>_F
___CT_________AA_______________GG______
19. _1104_14_>_F
___CT_________AA_______________GG______
20. _1104_15_>_F
___CT_________AA_______________GG______
21. _1104_16_>_F
___CT_________AA_______________GG______
22. _1104_2_>_FP
___CT_________AA_______________GG______
23. _1104_3_>_FP
___CT_________AA_______________GG______
24. _1104_6_>_FP
___CT_________AA_______________GG______
25. _1104_7_>_FP
___CT_________AA_______________GG______
26. _1104_9_>_FP
___CT_________AA_______________GG______
27. _NA33
AA_______________________________________
28. _RUQ_1577
______CTAACCAG___CC______TTGGAGCT
29. _RUQ_1577
___AG____________AA___AA______CCAG___
30. _RUQ_1577
___CT________________________TTGGAG___
31. _RUQ_1577
___CT_________AG_______________GG______
32. _M6_18,_19
___CT_________AA_______________GG______
33. _KW_397_I-032
___CT_________AG_______________GG______
34. _Row_24_C0211_44
___CT_________AG_______________GG______
35. _4A_D371_T2
___CT_________AG_______________GG______
36. _MITC-000715
___AG____________AA___AA______CCGG___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-6-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
2. _GC-01-6-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
3. _GC-01-6-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
4. _GC-01-6-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
5. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
6. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
7. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
8. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
9. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
10. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
11. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
12. _GC-01-006-1-06
TTGGTT___CC___CG___GGCGCTCCGGCC
13. _Tree:_FP_4
AACCAA___CC___CGGGCC___AGGGGGGG
14. _GC-01-6-1-6
AACCAA___CC___CGGGCC___AGGGGGGG
15. _1104_1_>_FP
________________________GG___CT______CC
16. _1104_10_>_F
________________________GG___CT______CC
17. _1104_11_>_F
________________________GG___CT______CC
18. _1104_12_>_F
________________________GG___CT______CC
19. _1104_14_>_F
________________________GG___CT______CC
20. _1104_15_>_F
________________________GG___CT______CC
21. _1104_16_>_F
________________________GG___CT______CC
22. _1104_2_>_FP
________________________GG___CT______CC
23. _1104_3_>_FP
________________________GG___CT______CC
24. _1104_6_>_FP
________________________GG___CT______CC
25. _1104_7_>_FP
________________________GG___CT______CC
26. _1104_9_>_FP
________________________GG___CT______CC
27. _NA33
TT__________________GGCCCGCT_________
28. _RUQ_1577
_________TTCCTTTT___CG_________GG___
29. _RUQ_1577
AACCAA___CC___CGGGCG___GGCGGGGG
30. _RUQ_1577
______TT___CC_________CGCCCC___-___
31. _RUQ_1577
________________________CG___CC______CC
32. _M6_18,_19
________________________CC___CC______CC
33. _KW_397_I-032
________________________GG___CT______CC
34. _Row_24_C0211_44
________________________GG___CT______CC
35. _4A_D371_T2
________________________CG___CC______CC
36. _MITC-000715
AACCAA___CC___CGGGCC___AGGGGGGG
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-01-6-1-06
CGCC___AACTAGCC______TTCG___CCAG
2. _GC-01-6-1-06
CGCC___AACTAGCC______TTCG___CCAG
3. _GC-01-6-1-06
CGCC___AACTAGCC______TTCG___CCAG
4. _GC-01-6-1-06
CGCC___AACTAGCC______TTCG___CCAG
5. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
6. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
7. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
8. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
9. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
10. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
11. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
12. _GC-01-006-1-06
CGCC___AACTAGCC______TTCG___CCAG
13. _Tree:_FP_4
CGGG___AAAGAG_________AA______GGAG
14. _GC-01-6-1-6
CGGG___AAAGAG_________AA______GGAG
15. _1104_1_>_FP
CG______AACTAG__________________CCAG
16. _1104_10_>_F
CG______AACTAG__________________CCAG
17. _1104_11_>_F
CG______AACTAG__________________CCAG
18. _1104_12_>_F
CG______AACTAG__________________CCAG
19. _1104_14_>_F
CG______AACTAG__________________CCAG
20. _1104_15_>_F
CG______AACTAG__________________CCAG
21. _1104_16_>_F
CG______AACTAG__________________CCAG
22. _1104_2_>_FP
CG______AACTAG__________________CCAG
23. _1104_3_>_FP
CG______AACTAG__________________CCAG
24. _1104_6_>_FP
CG______AACTAG__________________CCAG
25. _1104_7_>_FP
CG______AACTAG__________________CCAG
26. _1104_9_>_FP
CG______AACTAG__________________CCAG
27. _NA33
____________CT_______________CG___CC___
28. _RUQ_1577
______GG______AGCCCTAA______CC___GG
29. _RUQ_1577
GGGG___AAAAAG_________AA______GGGG
30. _RUQ_1577
_______________AGCC_______________CC___
31. _RUQ_1577
GG______AATTAG__________________CCGG
32. _M6_18,_19
GG______AACTAG__________________CTAG
33. _KW_397_I-032
CG______AACTAG__________________CCAG
34. _Row_24_C0211_44
CG______AACTAG__________________CCAG
35. _4A_D371_T2
GG______AATTAG__________________CCGG
36. _MITC-000715
CGGG___AAAGAG_________AA______GGAG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-01-6-1-06
GGAACTAG___TTCCTTTTCCGG______CC
2. _GC-01-6-1-06
GGAACTAG___TTCCTTTTCCGG______CC
3. _GC-01-6-1-06
GGAACTAG___TTCCTTTTCCGG______CC
4. _GC-01-6-1-06
GGAACTAG___TTCCTTTTCCGG______CC
5. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
6. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
7. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
8. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
9. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
10. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
11. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
12. _GC-01-006-1-06
GGAACTAG___TTCCTTTTCCGG______CC
13. _Tree:_FP_4
CCAAAGAG_________AAAA___CC_________
14. _GC-01-6-1-6
CCAAAGAG_________AAAA___CC_________
15. _1104_1_>_FP
___AA____________CC______CC____________
16. _1104_10_>_F
___AA____________CC______CC____________
17. _1104_11_>_F
___AA____________CC______CC____________
18. _1104_12_>_F
___AA____________CC______CC____________
19. _1104_14_>_F
___AA____________CC______CC____________
20. _1104_15_>_F
___AA____________CC______CC____________
21. _1104_16_>_F
___AA____________CC______CC____________
22. _1104_2_>_FP
___AA____________CC______CC____________
23. _1104_3_>_FP
___AA____________CC______CC____________
24. _1104_6_>_FP
___AA____________CC______CC____________
25. _1104_7_>_FP
___AA____________CC______CC____________
26. _1104_9_>_FP
___AA____________CC______CC____________
27. _NA33
_________AG___TT________________________
28. _RUQ_1577
____________CT___CC____________GTAA___
29. _RUQ_1577
CCAAAGAG_________AAAG___CC_________
30. _RUQ_1577
GG______AG___TT________________________
31. _RUQ_1577
___AA____________CC______CC____________
32. _M6_18,_19
___AA____________CC______CC____________
33. _KW_397_I-032
___AA____________CC______CC____________
34. _Row_24_C0211_44
___AA____________CC______CC____________
35. _4A_D371_T2
___AA____________CC______CC____________
36. _MITC-000715
CCAAAGAG_________AAAA___CC_________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-01-6-1-06
GTTT______TTAAGG______TTCCTTCCAG
2. _GC-01-6-1-06
___TT______TTAAGG______TTCCTTCCAG
3. _GC-01-6-1-06
GTTT______TTAAGG______TTCCTTCCAG
4. _GC-01-6-1-06
GTTT______TTAAGG______TTCCTTCCAG
5. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
6. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
7. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
8. _GC-01-006-1-06
GTTT______TTAA_________TTCCTTCCAG
9. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
10. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
11. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
12. _GC-01-006-1-06
GTTT______TTAAGG______TTCCTTCCAG
13. _Tree:_FP_4
ACAA______AA___GG______AAGGAAGGAG
14. _GC-01-6-1-6
ACAA______AAACGG______AAGGAAGGAG
15. _1104_1_>_FP
GTTT_________AA_________TT___TTCCAG
16. _1104_10_>_F
GTTT_________AA_________TT___TTCCAG
17. _1104_11_>_F
GTTT_________AA_________TT___TTCCAG
18. _1104_12_>_F
GTTT_________AA_________TT___TTCCAG
19. _1104_14_>_F
GTTT_________AA_________TT___TTCCAG
20. _1104_15_>_F
GTTT_________AA_________TT___TTCCAG
21. _1104_16_>_F
GTTT_________AA_________TT___TTCCAG
22. _1104_2_>_FP
GTTT_________AA_________TT___TTCCAG
23. _1104_3_>_FP
GTTT_________AA_________TT___TTCCAG
24. _1104_6_>_FP
GTTT_________AA_________TT___TTCCAG
25. _1104_7_>_FP
GTTT_________AA_________TT___TTCCAG
26. _1104_9_>_FP
___TT_________AA_________TT___TTCCAG
27. _NA33
______________________________CC___GG___
28. _RUQ_1577
GT___GGTT_________AGGG_________CC___
29. _RUQ_1577
ACAA______AAACGG______AAGGAAGGAA
30. _RUQ_1577
GT_________TT_______________CCTTCCAA
31. _RUQ_1577
GTTT_________AC_________TT___TTCCAG
32. _M6_18,_19
TTTT_________CC_________TT___TTCGAG
33. _KW_397_I-032
GTTT_________AC_________TT___TTCCAG
34. _Row_24_C0211_44
GTTT_________AC_________TT___TTCCAG
35. _4A_D371_T2
GTTT_________AC_________TT___TTCCAA
36. _MITC-000715
ACAA______AAACGG______AAGGAAGGAG
 127 128 129 130 131 132 133 134       
1. _GC-01-6-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
2. _GC-01-6-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
3. _GC-01-6-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
4. _GC-01-6-1-06
CC______CCAACC___CCX_XX_XX_XX_XX_XX_X
5. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
6. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
7. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
8. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
9. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
10. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
11. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
12. _GC-01-006-1-06
CC______CCAACCAACCX_XX_XX_XX_XX_XX_X
13. _Tree:_FP_4
GG______CC___CCAACCX_XX_XX_XX_XX_XX_X
14. _GC-01-6-1-6
GG______CC___CCAACCX_XX_XX_XX_XX_XX_X
15. _1104_1_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
16. _1104_10_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
17. _1104_11_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
18. _1104_12_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
19. _1104_14_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
20. _1104_15_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
21. _1104_16_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
22. _1104_2_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
23. _1104_3_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
24. _1104_6_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
25. _1104_7_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
26. _1104_9_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
27. _NA33
________________________X_XX_XX_XX_XX_XX_X
28. _RUQ_1577
___TTAT_______________X_XX_XX_XX_XX_XX_X
29. _RUQ_1577
GG______CC___CCAACCX_XX_XX_XX_XX_XX_X
30. _RUQ_1577
________________________X_XX_XX_XX_XX_XX_X
31. _RUQ_1577
CC_____________________X_XX_XX_XX_XX_XX_X
32. _M6_18,_19
CC_____________________X_XX_XX_XX_XX_XX_X
33. _KW_397_I-032
CC_____________________X_XX_XX_XX_XX_XX_X
34. _Row_24_C0211_44
CC_____________________X_XX_XX_XX_XX_XX_X
35. _4A_D371_T2
CC_____________________X_XX_XX_XX_XX_XX_X
36. _MITC-000715
GG______CC___CCAACCX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._NA_33 GC-01-6-1-06
Location: Field: 1, Block: 1, Rep: 4, Tree: PL3
Notes: PL3 FP2
 Mars, 2018
2._NA_33 GC-01-6-1-06
Location: Field: 1, Block: 1, Rep: 4, Tree: PL9
Notes: PL9 FP1
 Mars, 2018
3._NA_33 GC-01-6-1-06
Location: Field: 1, Block: 1, Rep: 4, Tree: PL12
Notes: PL12 FP4
 Mars, 2018
4._NA_33 GC-01-6-1-06
Location: Field: 1, Block: 1, Rep: 4, Tree: PL14
Notes: PL14 FP3
 Mars, 2018
5._NA_33 GC-01-006-1-06
Location: Tree: 1
Notes: 1 > FP5
 Mars, 2018
6._NA_33 GC-01-006-1-06
Location: Tree: 2
Notes: 2 > FP6
 Mars, 2018
7._NA_33 GC-01-006-1-06
Location: Tree: 6
Notes: 6 > FP11
 Mars, 2018
8._NA_33 GC-01-006-1-06
Location: Tree: 7
Notes: 7 > FP12
 Mars, 2018
9._NA_33 GC-01-006-1-06
Location: Tree: 10
Notes: 10 > FP8
 Mars, 2018
10._NA_33 GC-01-006-1-06
Location: Tree: 11
Notes: 11 > FP9
 Mars, 2018
11._NA_33 GC-01-006-1-06
Location: Tree: 15
Notes: 15 > FP13
 Mars, 2018
12._NA_33 GC-01-006-1-06
Location: Tree: 16
Notes: 16 > FP14
 Mars, 2018
13._NA_33
Location: Tree: FP 4
 Mars, 2018
14._NA_33 GC-01-6-1-6
Location: Field: 1, Block: 1, Rep: 4, Tree: 1 > FP5
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018
15._NA_33
Location: 1104 1 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
16._NA_33
Location: 1104 10 > F
 Dapeng Zhang, 2016
17._NA_33
Location: 1104 11 > F
 Dapeng Zhang, 2016
18._NA_33
Location: 1104 12 > F
 Dapeng Zhang, 2016
19._NA_33
Location: 1104 14 > F
 Dapeng Zhang, 2016
20._NA_33
Location: 1104 15 > F
 Dapeng Zhang, 2016
21._NA_33
Location: 1104 16 > F
 Dapeng Zhang, 2016
22._NA_33
Location: 1104 2 > FP
 Dapeng Zhang, 2016
23._NA_33
Location: 1104 3 > FP
 Dapeng Zhang, 2016
24._NA_33
Location: 1104 6 > FP
 Dapeng Zhang, 2016
25._NA_33
Location: 1104 7 > FP
 Dapeng Zhang, 2016
26._NA_33
Location: 1104 9 > FP
 Dapeng Zhang, 2016

Center for Forestry Research and Technology Transfer Vietnam

27._NA_33
 Jocelyn De Wever et al., 2019

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

28._NA_33 RUQ 1577
 Lambert Motilal, 2023
29._NA_33 RUQ 1577
Notes: Reading_Collection
 Mars, 2018
30._NA_33 RUQ 1577
 Dapeng Zhang, 2014
31._NA_33 RUQ 1577
 Dapeng Zhang, 2016

Cocoa Research Institute of Ghana (CRIG) Ghana

32._NA_33
Location: M6 18, 19
 Dapeng Zhang, 2016

Indonesian Coffee and Cocoa Research Institute (ICCRI) Indonesia

33._NA_33
Location: KW 397 I-032
 Dapeng Zhang, 2016

Malaysian Cocoa Board (MCB) Malaysia

34._NA_33
Location: Row 24 C0211 44
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

35._NA_33
Location: 4A D371 T2
 Dapeng Zhang, 2016

USDA-SHRS United States of America

36._NA_33 MITC-000715
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129TcSNP1527 130Tcm001s00947643
131Tcm002s20575712 132Tcm003s01336581 133Tcm003s07402719 134Tcm006s26664133