SNP Profiles of PA-169   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTACGGAGCCCCCCCCGGTTCCTT
1._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
2._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
3._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
4._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
5._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
6._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
7._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
8._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
9._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
10._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
11._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
12._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
13._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
14._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
15._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
16._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
17._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
18._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
19._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
20._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
21._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
22._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
23._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
24._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
25._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
26._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
27._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
28._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
29._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
30._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
31._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
32._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
33._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
34._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
35._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
36._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
37._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
38._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
39._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
40._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
41._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
42._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
43._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
44._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
45._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
46._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
47._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
48._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
49._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
50._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
51._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
52._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
53._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
54._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
55._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
56._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
57._RUQ_1479
__CTAC__CC_CC__TTCC_
58._RUQ_1479
AAACCTAC____CCCCGG_CC_
59._RUQ_1479
___AC__CC_______
60._RUQ_1479
AAAC_ACGGAG_GGGG_GGAAGGAA
61._MITC-000600
AAAC_ACGGAG_GGGG_GGAAGGAA
 1516171819202122232425262728
_Input profile
AACCAAAGCCCCCCTTAATTGGAAAACC
1._PA_169_[PER]
___AG__CC____AAAA_
2._PA_169_[PER]
___AG__CC____AAAA_
3._PA_169_[PER]
___AG__CC____AAAA_
4._PA_169_[PER]
___AG__CC____AAAA_
5._PA_169_[PER]
___AG__CC____AAAA_
6._PA_169_[PER]
___AG__CC____AAAA_
7._PA_169_[PER]
___AG__CC____AAAA_
8._PA_169_[PER]
___AG__CC____AAAA_
9._PA_169_[PER]
___AG__CC____AAAA_
10._PA_169_[PER]
___AG__CC____AAAA_
11._PA_169_[PER]
___AG__CC____AAAA_
12._PA_169_[PER]
___AG__CC____AAAA_
13._PA_169_[PER]
___AG__CC____AAAA_
14._PA_169_[PER]
___AG__CC____AAAA_
15._PA_169_[PER]
___AG__CC____AAAA_
16._PA_169_[PER]
___AG__CC____AAAA_
17._PA_169_[PER]
___AG__CC____AAAA_
18._PA_169_[PER]
___AG__CC____AAAA_
19._PA_169_[PER]
___AG__CC____AAAA_
20._PA_169_[PER]
___AG__CC____AAAA_
21._PA_169_[PER]
___AG__CC____AAAA_
22._PA_169_[PER]
___AG__CC____AAAA_
23._PA_169_[PER]
___AG__CC____AAAA_
24._PA_169_[PER]
___AG__CC____AAAA_
25._PA_169_[PER]
___AG__CC____AAAA_
26._PA_169_[PER]
___AG__CC____AAAA_
27._PA_169_[PER]
___AG__CC____AAAA_
28._PA_169_[PER]
___AG_______AAAA_
29._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
30._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
31._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
32._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
33._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
34._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
35._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
36._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
37._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
38._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
39._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
40._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
41._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
42._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
43._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
44._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
45._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
46._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
47._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
48._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
49._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
50._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
51._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
52._GC-08-094-2-17
AACCAAAGCCCCCC_AATTGGAAAACC
53._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
54._GC-08-094-2-17
AACCAAAGCCCC_TTAATTGGAAAACC
55._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
56._PA_169_[PER]
___AG__CC____AAAA_
57._RUQ_1479
_____CC____GG_AACC
58._RUQ_1479
___AG__CC____AAAA_
59._RUQ_1479
___AGTT_________
60._RUQ_1479
TTCCAGAGGG_CCAAAGAAGGAAAAGG
61._MITC-000600
TTCCAGAGGG_CCAAAGAAGGAAAAGG
 2930313233343536373839404142
_Input profile
GGAATTTTAGGGCCAAGTGGGTAACTGG
1._PA_169_[PER]
GGAA___GG_AAGT__AA__
2._PA_169_[PER]
GGAA___GG_AAGT__AA__
3._PA_169_[PER]
GGAA___GG_AAGT__AA__
4._PA_169_[PER]
GGAA___GG_AAGT__AA__
5._PA_169_[PER]
GGAA___GG_AAGT__AA__
6._PA_169_[PER]
GGAA___GG_AAGT__AA__
7._PA_169_[PER]
GGAA___GG_AAGT__AA__
8._PA_169_[PER]
GGAA___GG_AAGT__AA__
9._PA_169_[PER]
GGAA___GG_AAGT__AA__
10._PA_169_[PER]
GGAA___GG_AAGT__AA__
11._PA_169_[PER]
GGAA___GG_AAGT__AA__
12._PA_169_[PER]
GGAA___GG_AAGT__AA__
13._PA_169_[PER]
GGAA___GG_AAGT__AA__
14._PA_169_[PER]
GGAA___GG_AAGT__AA__
15._PA_169_[PER]
GGAA___GG_AAGT__AA__
16._PA_169_[PER]
GGAA___GG_AAGT__AA__
17._PA_169_[PER]
GGAA___GG_AAGT__AA__
18._PA_169_[PER]
GGAA___GG_AAGT__AA__
19._PA_169_[PER]
GGAA___GG_AAGT__AA__
20._PA_169_[PER]
GGAA___GG_AAGT__AA__
21._PA_169_[PER]
GGAA___GG_AAGT__AA__
22._PA_169_[PER]
GGAA___GG_AAGT__AA__
23._PA_169_[PER]
GGAA___GG_AAGT__AA__
24._PA_169_[PER]
GGAA___GG_AAGT__AA__
25._PA_169_[PER]
GGAA___GG_AAGT__AA__
26._PA_169_[PER]
GGAA___GG_AAGT__AA__
27._PA_169_[PER]
GGAA___GG_AAGT__AA__
28._PA_169_[PER]
GGAA___GG_AAGT__AA__
29._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
30._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
31._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
32._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
33._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
34._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
35._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
36._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
37._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
38._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
39._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
40._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
41._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
42._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
43._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
44._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
45._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
46._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
47._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
48._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
49._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
50._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
51._GC-08-094-2-17
GGAA_TTAGGGCCAAGTGGGTAATTGG
52._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
53._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
54._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
55._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
56._PA_169_[PER]
GGAA___GG_AAGT__AA__
57._RUQ_1479
GG___AGGGCCAAGT__AATT_
58._RUQ_1479
GGAA___GG_AAGT__AG__
59._RUQ_1479
GG____GG_AA____TT_
60._RUQ_1479
CCAAAAAAAGGGCCAAACCCACAAAAGG
61._MITC-000600
CCAAAAAAAGGGCCAAACCCACAAAAGG
 4344454647484950515253545556
_Input profile
CCGGTTCTAAGGAACCCCGGAGGTTTCC
1._PA_169_[PER]
___CT_________CC
2._PA_169_[PER]
___CT_________CC
3._PA_169_[PER]
___CT_________CC
4._PA_169_[PER]
___CT_________CC
5._PA_169_[PER]
___CT_________CC
6._PA_169_[PER]
___CT_________CC
7._PA_169_[PER]
___CT_________CC
8._PA_169_[PER]
___CT_________CC
9._PA_169_[PER]
___CT_________CC
10._PA_169_[PER]
___CT_________CC
11._PA_169_[PER]
___CT_________CC
12._PA_169_[PER]
___CT_________CC
13._PA_169_[PER]
___CT_________CC
14._PA_169_[PER]
___CT_________CC
15._PA_169_[PER]
___CT_________CC
16._PA_169_[PER]
___CT_________CC
17._PA_169_[PER]
___CT_________CC
18._PA_169_[PER]
___CT_________CC
19._PA_169_[PER]
___CT_________CC
20._PA_169_[PER]
___CT_________CC
21._PA_169_[PER]
___CT_________CC
22._PA_169_[PER]
___CT_________CC
23._PA_169_[PER]
___CT_________CC
24._PA_169_[PER]
___CT_________CC
25._PA_169_[PER]
___CT_________CC
26._PA_169_[PER]
___CT__________
27._PA_169_[PER]
___CT_________CC
28._PA_169_[PER]
___CT_________CC
29._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
30._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
31._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
32._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
33._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
34._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
35._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
36._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
37._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
38._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
39._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
40._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
41._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
42._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
43._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
44._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
45._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
46._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
47._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
48._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
49._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
50._GC-03-028-3-02
CCGGTTCT_GGAACCCCGGAGGTTTCC
51._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
52._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
53._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
54._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
55._GC-03-028-3-02
CCGGTTCT_GG_CCCCGGAG_TT_
56._PA_169_[PER]
___CT_________CC
57._RUQ_1479
_GGTT__GG______TTCC
58._RUQ_1479
___CT_________CC
59._RUQ_1479
_____GG________
60._RUQ_1479
GGCC_AG_GGAAGG_GGAGACAAGG
61._MITC-000600
GGCC_AG_GGAAGG_GGAGACAAGG
 5758596061626364656667686970
_Input profile
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
1._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
2._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
3._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
4._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
5._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
6._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
7._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
8._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
9._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
10._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
11._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
12._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
13._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
14._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
15._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
16._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
17._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
18._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
19._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
20._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
21._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
22._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
23._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
24._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
25._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
26._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
27._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
28._PA_169_[PER]
TT__CC_CCAAGG_AAAAGT__
29._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
30._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
31._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
32._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
33._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
34._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
35._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
36._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
37._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
38._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
39._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
40._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
41._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
42._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
43._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
44._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
45._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
46._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
47._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
48._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
49._GC-03-028-3-02
TTTTGGCC_CCAAGGGGAAAAGTGGGG
50._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
51._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
52._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
53._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
54._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGT_GG
55._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
56._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
57._RUQ_1479
_TTGGCCCCCCAA_GGAAAAGTGGGG
58._RUQ_1479
TT__CC_CCAAGG_AAAAGTGG_
59._RUQ_1479
__GG______AAAA_GGGG
60._RUQ_1479
AAAAGGGGGGGGAAGGGGAAAAACCCGG
61._MITC-000600
AAAAGGGGGGGGAAGGGGAAAAACCCGG
 7172737475767778798081828384
_Input profile
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
1._PA_169_[PER]
__AGTT_____AAGG___
2._PA_169_[PER]
__AGTT_____AAGG___
3._PA_169_[PER]
__AGTT_____AAGG___
4._PA_169_[PER]
__AGTT_____AAGG___
5._PA_169_[PER]
__AGTT_____AAGG___
6._PA_169_[PER]
__AGTT_____AAGG___
7._PA_169_[PER]
__AGTT_____AAGG___
8._PA_169_[PER]
__AGTT_____AAGG___
9._PA_169_[PER]
__AGTT_____AAGG___
10._PA_169_[PER]
__AGTT_____AAGG___
11._PA_169_[PER]
__AGTT_____AAGG___
12._PA_169_[PER]
__AGTT_____AAGG___
13._PA_169_[PER]
__AGTT_____AAGG___
14._PA_169_[PER]
__AGTT_____AAGG___
15._PA_169_[PER]
__AGTT_____AAGG___
16._PA_169_[PER]
__AGTT_____AAGG___
17._PA_169_[PER]
__AGTT_____AAGG___
18._PA_169_[PER]
__AGTT_____AAGG___
19._PA_169_[PER]
__AGTT_____AAGG___
20._PA_169_[PER]
__AGTT_____AAGG___
21._PA_169_[PER]
__AGTT_____AAGG___
22._PA_169_[PER]
__AGTT_____AAGG___
23._PA_169_[PER]
__AGTT_____AAGG___
24._PA_169_[PER]
__AGTT_____AAGG___
25._PA_169_[PER]
__AGTT_____AAGG___
26._PA_169_[PER]
__AGTT_____AAGG___
27._PA_169_[PER]
__AGTT_____AAGG___
28._PA_169_[PER]
__AGTT_____AAGG___
29._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
30._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
31._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
32._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
33._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
34._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
35._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
36._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
37._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
38._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
39._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
40._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
41._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
42._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
43._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
44._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
45._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
46._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
47._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
48._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
49._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
50._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
51._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
52._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
53._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
54._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
55._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
56._PA_169_[PER]
__AATT_____AAGG___
57._RUQ_1479
_________AAGG__AA
58._RUQ_1479
__AATT_____AAGG___
59._RUQ_1479
__AA______AAGG__AA
60._RUQ_1479
___AACCGGCCCC_AACCGGAAAA
61._MITC-000600
___AACCGGCCCC_AACCGGAAAA
 8586878889909192939495   
_Input profile
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
1._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
2._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
3._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
4._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
5._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
6._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
7._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
8._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
9._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
10._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
11._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
12._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
13._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
14._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
15._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
16._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
17._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
18._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
19._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
20._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
21._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
22._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
23._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
24._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
25._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
26._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
27._PA_169_[PER]
CT_CC_AA_CCTTTT__X_XX_XX_X
28._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
29._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
30._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
31._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
32._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
33._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
34._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
35._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
36._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
37._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
38._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
39._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
40._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
41._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
42._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
43._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
44._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
45._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
46._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
47._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
48._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
49._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
50._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
51._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
52._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
53._GC-08-094-2-17
CT_CCCCAACTCCTTTTATGGX_XX_XX_X
54._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
55._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
56._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
57._RUQ_1479
CT___AACCCCTT___X_XX_XX_X
58._RUQ_1479
CTCTCC_AA_CCTTTT__X_XX_XX_X
59._RUQ_1479
__CC__CT_TT___X_XX_XX_X
60._RUQ_1479
AGAG_GG__GGAAAAATGGX_XX_XX_X
61._MITC-000600
AGAG_GG__GGAAAAATGGX_XX_XX_X

Input profile: PA_169_[PER] GC-08-094-2-17

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

1._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 3
 Dapeng Zhang, 2016

2._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 11 > F
 Dapeng Zhang, 2016

3._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 10 > F
 Dapeng Zhang, 2016

4._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 1 > FP
 Dapeng Zhang, 2016

5._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 16
 Dapeng Zhang, 2016

6._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 15
 Dapeng Zhang, 2016

7._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 14
 Dapeng Zhang, 2016

8._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 13
 Dapeng Zhang, 2016

9._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 6
 Dapeng Zhang, 2016

10._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 3
 Dapeng Zhang, 2016

11._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

12._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 4
 Dapeng Zhang, 2016

13._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 2 > FP
 Dapeng Zhang, 2016

14._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 1 > FP
 Dapeng Zhang, 2016

15._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 18
 Dapeng Zhang, 2016

16._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 17
 Dapeng Zhang, 2016

17._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 16
 Dapeng Zhang, 2016

18._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 15
 Dapeng Zhang, 2016

19._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 14
 Dapeng Zhang, 2016

20._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 13
 Dapeng Zhang, 2016

21._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 12
 Dapeng Zhang, 2016

22._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 11
 Dapeng Zhang, 2016

23._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 8
 Dapeng Zhang, 2016

24._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 6
 Dapeng Zhang, 2016

25._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 5
 Dapeng Zhang, 2016

26._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 8
 Dapeng Zhang, 2016

27._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 9
 Dapeng Zhang, 2016

28._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 7 > FP
 Dapeng Zhang, 2016

29._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

30._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

31._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

32._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

33._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

34._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP3
 Mars, 2018

35._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

36._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

37._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

38._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

39._PA_169_[PER] GC-03-028-3-02

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

40._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

41._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

42._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

43._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

44._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

45._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

46._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

47._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

48._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

49._PA_169_[PER] GC-03-028-3-02

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

50._PA_169_[PER] GC-03-028-3-02

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

51._PA_169_[PER] GC-08-094-2-17

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 17
Notes: 17
 Mars, 2018

52._PA_169_[PER] GC-08-094-2-17

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

53._PA_169_[PER] GC-08-094-2-17

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

54._PA_169_[PER] GC-08-094-2-17

99.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

55._PA_169_[PER] GC-03-028-3-02

99.5 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

56._PA_169_[PER]

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 491
 Dapeng Zhang, 2016

57._PA_169_[PER] RUQ_1479

97.7 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._PA_169_[PER] RUQ_1479

97.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

59._PA_169_[PER] RUQ_1479

90.5 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._PA_169_[PER] RUQ_1479

49.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

61._PA_169_[PER] MITC-000600

49.4 %
81 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240