SNP Profiles of PA-169   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTACGGAGCCCCCCCCGGTTCCTT
1._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
2._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
3._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
4._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
5._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
6._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
7._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
8._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
9._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
10._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
11._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
12._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
13._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
14._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
15._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
16._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
17._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
18._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
19._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
20._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
21._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
22._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
23._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
24._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
25._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
26._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
27._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
28._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
29._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
30._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
31._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
32._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
33._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
34._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
35._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
36._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
37._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
38._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
39._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
40._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
41._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
42._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
43._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
44._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
45._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
46._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
47._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
48._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
49._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
50._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
51._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
52._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
53._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
54._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
55._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
56._RUQ_1479
__CTAC__CC_CC__TTCC_
57._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
58._RUQ_1479
AAACCTAC____CCCCGG_CC_
59._RUQ_1479
___AC__CC_______
60._RUQ_1479
AAAC_ACGGAG_GGGG_GGAAGGAA
61._MITC-000600
AAAC_ACGGAG_GGGG_GGAAGGAA
 1516171819202122232425262728
_Input profile
AACCAAAGCCCCCCTTAATTGGAAAACC
1._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
2._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
3._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
4._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
5._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
6._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
7._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
8._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
9._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
10._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
11._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
12._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
13._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
14._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
15._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
16._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
17._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
18._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
19._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
20._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
21._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
22._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
23._GC-08-094-2-17
AACCAAAGCCCCCC_AATTGGAAAACC
24._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
25._GC-08-094-2-17
AACCAAAGCCCC_TTAATTGGAAAACC
26._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
27._PA_169_[PER]
___AG__CC____AAAA_
28._PA_169_[PER]
___AG__CC____AAAA_
29._PA_169_[PER]
___AG__CC____AAAA_
30._PA_169_[PER]
___AG__CC____AAAA_
31._PA_169_[PER]
___AG__CC____AAAA_
32._PA_169_[PER]
___AG__CC____AAAA_
33._PA_169_[PER]
___AG__CC____AAAA_
34._PA_169_[PER]
___AG__CC____AAAA_
35._PA_169_[PER]
___AG__CC____AAAA_
36._PA_169_[PER]
___AG__CC____AAAA_
37._PA_169_[PER]
___AG__CC____AAAA_
38._PA_169_[PER]
___AG__CC____AAAA_
39._PA_169_[PER]
___AG__CC____AAAA_
40._PA_169_[PER]
___AG__CC____AAAA_
41._PA_169_[PER]
___AG__CC____AAAA_
42._PA_169_[PER]
___AG__CC____AAAA_
43._PA_169_[PER]
___AG__CC____AAAA_
44._PA_169_[PER]
___AG__CC____AAAA_
45._PA_169_[PER]
___AG__CC____AAAA_
46._PA_169_[PER]
___AG__CC____AAAA_
47._PA_169_[PER]
___AG__CC____AAAA_
48._PA_169_[PER]
___AG__CC____AAAA_
49._PA_169_[PER]
___AG__CC____AAAA_
50._PA_169_[PER]
___AG__CC____AAAA_
51._PA_169_[PER]
___AG__CC____AAAA_
52._PA_169_[PER]
___AG__CC____AAAA_
53._PA_169_[PER]
___AG__CC____AAAA_
54._PA_169_[PER]
___AG_______AAAA_
55._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
56._RUQ_1479
_____CC____GG_AACC
57._PA_169_[PER]
___AG__CC____AAAA_
58._RUQ_1479
___AG__CC____AAAA_
59._RUQ_1479
___AGTT_________
60._RUQ_1479
TTCCAGAGGG_CCAAAGAAGGAAAAGG
61._MITC-000600
TTCCAGAGGG_CCAAAGAAGGAAAAGG
 2930313233343536373839404142
_Input profile
GGAATTTTAGGGCCAAGTGGGTAATTGG
1._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
2._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
3._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
4._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
5._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
6._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
7._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
8._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
9._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
10._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
11._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
12._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
13._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
14._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
15._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
16._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
17._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
18._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
19._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
20._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
21._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
22._GC-08-094-2-17
GGAA_TTAGGGCCAAGTGGGTAATTGG
23._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
24._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
25._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
26._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
27._PA_169_[PER]
GGAA___GG_AAGT__AA__
28._PA_169_[PER]
GGAA___GG_AAGT__AA__
29._PA_169_[PER]
GGAA___GG_AAGT__AA__
30._PA_169_[PER]
GGAA___GG_AAGT__AA__
31._PA_169_[PER]
GGAA___GG_AAGT__AA__
32._PA_169_[PER]
GGAA___GG_AAGT__AA__
33._PA_169_[PER]
GGAA___GG_AAGT__AA__
34._PA_169_[PER]
GGAA___GG_AAGT__AA__
35._PA_169_[PER]
GGAA___GG_AAGT__AA__
36._PA_169_[PER]
GGAA___GG_AAGT__AA__
37._PA_169_[PER]
GGAA___GG_AAGT__AA__
38._PA_169_[PER]
GGAA___GG_AAGT__AA__
39._PA_169_[PER]
GGAA___GG_AAGT__AA__
40._PA_169_[PER]
GGAA___GG_AAGT__AA__
41._PA_169_[PER]
GGAA___GG_AAGT__AA__
42._PA_169_[PER]
GGAA___GG_AAGT__AA__
43._PA_169_[PER]
GGAA___GG_AAGT__AA__
44._PA_169_[PER]
GGAA___GG_AAGT__AA__
45._PA_169_[PER]
GGAA___GG_AAGT__AA__
46._PA_169_[PER]
GGAA___GG_AAGT__AA__
47._PA_169_[PER]
GGAA___GG_AAGT__AA__
48._PA_169_[PER]
GGAA___GG_AAGT__AA__
49._PA_169_[PER]
GGAA___GG_AAGT__AA__
50._PA_169_[PER]
GGAA___GG_AAGT__AA__
51._PA_169_[PER]
GGAA___GG_AAGT__AA__
52._PA_169_[PER]
GGAA___GG_AAGT__AA__
53._PA_169_[PER]
GGAA___GG_AAGT__AA__
54._PA_169_[PER]
GGAA___GG_AAGT__AA__
55._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAACTGG
56._RUQ_1479
GG___AGGGCCAAGT__AATT_
57._PA_169_[PER]
GGAA___GG_AAGT__AA__
58._RUQ_1479
GGAA___GG_AAGT__AG__
59._RUQ_1479
GG____GG_AA____TT_
60._RUQ_1479
CCAAAAAAAGGGCCAAACCCACAAAAGG
61._MITC-000600
CCAAAAAAAGGGCCAAACCCACAAAAGG
 4344454647484950515253545556
_Input profile
CCGGTTCTAAGGAACCCCGGAGGTTTCC
1._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
2._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
3._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
4._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
5._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
6._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
7._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
8._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
9._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
10._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
11._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
12._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
13._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
14._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
15._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
16._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
17._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
18._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
19._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
20._GC-03-028-3-02
CCGGTTCTAAGGAACCCCGGAGGTTTCC
21._GC-03-028-3-02
CCGGTTCT_GGAACCCCGGAGGTTTCC
22._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
23._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
24._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
25._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
26._GC-03-028-3-02
CCGGTTCT_GG_CCCCGGAG_TT_
27._PA_169_[PER]
___CT_________CC
28._PA_169_[PER]
___CT_________CC
29._PA_169_[PER]
___CT_________CC
30._PA_169_[PER]
___CT_________CC
31._PA_169_[PER]
___CT_________CC
32._PA_169_[PER]
___CT_________CC
33._PA_169_[PER]
___CT_________CC
34._PA_169_[PER]
___CT_________CC
35._PA_169_[PER]
___CT_________CC
36._PA_169_[PER]
___CT_________CC
37._PA_169_[PER]
___CT_________CC
38._PA_169_[PER]
___CT_________CC
39._PA_169_[PER]
___CT_________CC
40._PA_169_[PER]
___CT_________CC
41._PA_169_[PER]
___CT_________CC
42._PA_169_[PER]
___CT_________CC
43._PA_169_[PER]
___CT_________CC
44._PA_169_[PER]
___CT_________CC
45._PA_169_[PER]
___CT_________CC
46._PA_169_[PER]
___CT_________CC
47._PA_169_[PER]
___CT_________CC
48._PA_169_[PER]
___CT_________CC
49._PA_169_[PER]
___CT_________CC
50._PA_169_[PER]
___CT_________CC
51._PA_169_[PER]
___CT_________CC
52._PA_169_[PER]
___CT__________
53._PA_169_[PER]
___CT_________CC
54._PA_169_[PER]
___CT_________CC
55._GC-08-094-2-17
CCGGTTCTAAGGAACCCCGGAGGTTTCC
56._RUQ_1479
_GGTT__GG______TTCC
57._PA_169_[PER]
___CT_________CC
58._RUQ_1479
___CT_________CC
59._RUQ_1479
_____GG________
60._RUQ_1479
GGCC_AG_GGAAGG_GGAGACAAGG
61._MITC-000600
GGCC_AG_GGAAGG_GGAGACAAGG
 5758596061626364656667686970
_Input profile
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
1._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
2._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
3._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
4._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
5._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
6._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
7._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
8._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
9._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
10._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
11._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
12._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
13._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
14._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
15._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
16._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
17._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
18._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
19._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
20._GC-03-028-3-02
TTTTGGCC_CCAAGGGGAAAAGTGGGG
21._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
22._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
23._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
24._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
25._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGT_GG
26._GC-03-028-3-02
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
27._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
28._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
29._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
30._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
31._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
32._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
33._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
34._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
35._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
36._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
37._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
38._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
39._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
40._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
41._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
42._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
43._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
44._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
45._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
46._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
47._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
48._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
49._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
50._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
51._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
52._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
53._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
54._PA_169_[PER]
TT__CC_CCAAGG_AAAAGT__
55._GC-08-094-2-17
TTTTGGCCCCCCAAGGGGAAAAGTGGGG
56._RUQ_1479
_TTGGCCCCCCAA_GGAAAAGTGGGG
57._PA_169_[PER]
TT__CC_CCAAGG_AAAAGTGG_
58._RUQ_1479
TT__CC_CCAAGG_AAAAGTGG_
59._RUQ_1479
__GG______AAAA_GGGG
60._RUQ_1479
AAAAGGGGGGGGAAGGGGAAAAACCCGG
61._MITC-000600
AAAAGGGGGGGGAAGGGGAAAAACCCGG
 7172737475767778798081828384
_Input profile
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
1._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
2._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
3._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
4._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
5._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
6._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
7._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
8._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
9._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
10._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
11._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
12._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
13._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
14._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
15._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
16._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
17._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
18._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
19._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
20._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
21._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
22._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
23._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
24._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
25._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
26._GC-03-028-3-02
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
27._PA_169_[PER]
__AGTT_____AAGG___
28._PA_169_[PER]
__AGTT_____AAGG___
29._PA_169_[PER]
__AGTT_____AAGG___
30._PA_169_[PER]
__AGTT_____AAGG___
31._PA_169_[PER]
__AGTT_____AAGG___
32._PA_169_[PER]
__AGTT_____AAGG___
33._PA_169_[PER]
__AGTT_____AAGG___
34._PA_169_[PER]
__AGTT_____AAGG___
35._PA_169_[PER]
__AGTT_____AAGG___
36._PA_169_[PER]
__AGTT_____AAGG___
37._PA_169_[PER]
__AGTT_____AAGG___
38._PA_169_[PER]
__AGTT_____AAGG___
39._PA_169_[PER]
__AGTT_____AAGG___
40._PA_169_[PER]
__AGTT_____AAGG___
41._PA_169_[PER]
__AGTT_____AAGG___
42._PA_169_[PER]
__AGTT_____AAGG___
43._PA_169_[PER]
__AGTT_____AAGG___
44._PA_169_[PER]
__AGTT_____AAGG___
45._PA_169_[PER]
__AGTT_____AAGG___
46._PA_169_[PER]
__AGTT_____AAGG___
47._PA_169_[PER]
__AGTT_____AAGG___
48._PA_169_[PER]
__AGTT_____AAGG___
49._PA_169_[PER]
__AGTT_____AAGG___
50._PA_169_[PER]
__AGTT_____AAGG___
51._PA_169_[PER]
__AGTT_____AAGG___
52._PA_169_[PER]
__AGTT_____AAGG___
53._PA_169_[PER]
__AGTT_____AAGG___
54._PA_169_[PER]
__AGTT_____AAGG___
55._GC-08-094-2-17
CCCGAGTTCCGGCCCCAGAAGGCCAAAA
56._RUQ_1479
_________AAGG__AA
57._PA_169_[PER]
__AATT_____AAGG___
58._RUQ_1479
__AATT_____AAGG___
59._RUQ_1479
__AA______AAGG__AA
60._RUQ_1479
___AACCGGCCCC_AACCGGAAAA
61._MITC-000600
___AACCGGCCCC_AACCGGAAAA
 8586878889909192939495   
_Input profile
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
1._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
2._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
3._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
4._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
5._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
6._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
7._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
8._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
9._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
10._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
11._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
12._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
13._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
14._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
15._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
16._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
17._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
18._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
19._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
20._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
21._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
22._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
23._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
24._GC-08-094-2-17
CT_CCCCAACTCCTTTTATGGX_XX_XX_X
25._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
26._GC-03-028-3-02
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
27._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
28._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
29._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
30._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
31._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
32._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
33._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
34._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
35._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
36._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
37._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
38._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
39._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
40._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
41._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
42._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
43._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
44._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
45._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
46._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
47._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
48._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
49._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
50._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
51._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
52._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
53._PA_169_[PER]
CT_CC_AA_CCTTTT__X_XX_XX_X
54._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
55._GC-08-094-2-17
CTCTCCCCAACTCCTTTTATGGX_XX_XX_X
56._RUQ_1479
CT___AACCCCTT___X_XX_XX_X
57._PA_169_[PER]
CTCTCC_AA_CCTTTT__X_XX_XX_X
58._RUQ_1479
CTCTCC_AA_CCTTTT__X_XX_XX_X
59._RUQ_1479
__CC__CT_TT___X_XX_XX_X
60._RUQ_1479
AGAG_GG__GGAAAAATGGX_XX_XX_X
61._MITC-000600
AGAG_GG__GGAAAAATGGX_XX_XX_X

Input profile: PA_169_[PER] GC-08-094-2-17

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

1._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

3._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

5._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

6._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP3
 Mars, 2018

7._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

8._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

9._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

10._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

11._PA_169_[PER] GC-03-028-3-02

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

12._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

13._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

14._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

15._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

16._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

17._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

18._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

19._PA_169_[PER] GC-08-094-2-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

20._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

21._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

22._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 17
Notes: 17
 Mars, 2018

23._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

24._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

26._PA_169_[PER] GC-03-028-3-02

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

27._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 3
 Dapeng Zhang, 2016

28._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 11 > F
 Dapeng Zhang, 2016

29._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 10 > F
 Dapeng Zhang, 2016

30._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 1 > FP
 Dapeng Zhang, 2016

31._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 16
 Dapeng Zhang, 2016

32._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 15
 Dapeng Zhang, 2016

33._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 14
 Dapeng Zhang, 2016

34._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 13
 Dapeng Zhang, 2016

35._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 6
 Dapeng Zhang, 2016

36._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 3
 Dapeng Zhang, 2016

37._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

38._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 4
 Dapeng Zhang, 2016

39._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 2 > FP
 Dapeng Zhang, 2016

40._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 1 > FP
 Dapeng Zhang, 2016

41._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 18
 Dapeng Zhang, 2016

42._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 17
 Dapeng Zhang, 2016

43._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 16
 Dapeng Zhang, 2016

44._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 15
 Dapeng Zhang, 2016

45._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 14
 Dapeng Zhang, 2016

46._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 13
 Dapeng Zhang, 2016

47._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 12
 Dapeng Zhang, 2016

48._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 11
 Dapeng Zhang, 2016

49._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 8
 Dapeng Zhang, 2016

50._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 6
 Dapeng Zhang, 2016

51._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 5
 Dapeng Zhang, 2016

52._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 8
 Dapeng Zhang, 2016

53._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 9
 Dapeng Zhang, 2016

54._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 7 > FP
 Dapeng Zhang, 2016

55._PA_169_[PER] GC-08-094-2-17

99.5 %
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

56._PA_169_[PER] RUQ_1479

98.8 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

57._PA_169_[PER]

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 491
 Dapeng Zhang, 2016

58._PA_169_[PER] RUQ_1479

97.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

59._PA_169_[PER] RUQ_1479

92.9 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._PA_169_[PER] RUQ_1479

49.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

61._PA_169_[PER] MITC-000600

49.4 %
81 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240