SNP Profiles of RB-47   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTT__TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
46._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
47._RUQ_135
__CCCC__CC_-__TTTT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RB_47_[BRA]
___GG__CG____AAAA_
47._RUQ_135
_____CC____GG_AAGG
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
20._RB_47_[BRA]
GGAA___GG_AAGG__AA__
21._RB_47_[BRA]
GGAA___GG_AAGG__AA__
22._RB_47_[BRA]
GGAA___GG_AAGG__AA__
23._RB_47_[BRA]
GGAA___GG_AAGG__AA__
24._RB_47_[BRA]
GGAA___GG_AAGG__AA__
25._RB_47_[BRA]
GGAA___GG_AAGG__AA__
26._RB_47_[BRA]
GGAA___GG_AAGG__AA__
27._RB_47_[BRA]
GGAA___GG_AAGG__AA__
28._RB_47_[BRA]
GGAA___GG_AAGG__AA__
29._RB_47_[BRA]
GGAA___GG_AAGG__AA__
30._RB_47_[BRA]
GGAA___GG_AAGG__AA__
31._RB_47_[BRA]
GGAA___GG_AAGG__AA__
32._RB_47_[BRA]
GGAA___GG_AAGG__AA__
33._RB_47_[BRA]
GGAA___GG_AAGG__AA__
34._RB_47_[BRA]
GGAA___GG_AAGG__AA__
35._RB_47_[BRA]
GGAA___GG_AAGG__AA__
36._RB_47_[BRA]
GGAA___GG_AAGG__AA__
37._RB_47_[BRA]
GGAA___GG_AAGG__AA__
38._RB_47_[BRA]
GGAA___GG_AAGG__AA__
39._RB_47_[BRA]
GGAA___GG_AAGG__AA__
40._RB_47_[BRA]
GGAA___GG_AAGG__AA__
41._RB_47_[BRA]
GG____GG__GG_____
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
45._RB_47_[BRA]
GGAT___GG_AAGG__AA__
46._RB_47_[BRA]
GGAA___GG_AAGG__AA__
47._RUQ_135
GG___GGGGCCAAGG__AACC_
48._RUQ_135
GGAA___GG_AAGG__AG__
49._RUQ_135
CC___GGGG____GG_CC_
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 4344454647484950515253545556
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
2._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
3._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGG_CC
15._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
16._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTT_
17._GC-05-101-3-03
CCGTTTTTAAAGAACC_GGAAGGTTCC
18._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG_GGTTCC
20._RB_47_[BRA]
___TT_________CC
21._RB_47_[BRA]
___TT_________CC
22._RB_47_[BRA]
___TT_________CC
23._RB_47_[BRA]
___TT_________CC
24._RB_47_[BRA]
___TT_________CC
25._RB_47_[BRA]
___TT_________CC
26._RB_47_[BRA]
___TT_________CC
27._RB_47_[BRA]
___TT_________CC
28._RB_47_[BRA]
___TT_________CC
29._RB_47_[BRA]
___TT_________CC
30._RB_47_[BRA]
___TT_________CC
31._RB_47_[BRA]
___TT_________CC
32._RB_47_[BRA]
___TT_________CC
33._RB_47_[BRA]
___TT_________CC
34._RB_47_[BRA]
___TT_________CC
35._RB_47_[BRA]
___TT_________CC
36._RB_47_[BRA]
___TT_________CC
37._RB_47_[BRA]
___TT_________CC
38._RB_47_[BRA]
___TT_________CC
39._RB_47_[BRA]
___TT_________CC
40._RB_47_[BRA]
___TT__________
41._RB_47_[BRA]
___TT_________CC
42._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
43._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
44._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA_TTCC
45._RB_47_[BRA]
___TT_________CC
46._RB_47_[BRA]
___TT_________CC
47._RUQ_135
_GTTT__AG______CTCC
48._RUQ_135
___TT_________CC
49._RUQ_135
__TT_AA________CC
50._GC-05-101-3-3
GGAC_AA_AGAAGG_GGAACCAGGG
 5758596061626364656667686970
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
2._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
3._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
4._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
5._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
6._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
7._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
8._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
9._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
10._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
11._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
12._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
13._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
14._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
15._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGAC_GGGGAA
16._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
17._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
18._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
19._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
20._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
21._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
22._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
23._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
24._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
25._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
26._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
27._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
28._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
29._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
30._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
31._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
32._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
33._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
34._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
35._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
36._RB_47_[BRA]
CC__GG_CCCCGG_AC_GGGG_
37._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
38._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
39._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
40._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
41._RB_47_[BRA]
_____CCCCGG_ACAA_GG_
42._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
43._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
44._GC-08-065-1-87
CCTTGG_CCCCACGGGGACAAGGGGAA
45._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
46._RB_47_[BRA]
CC____CCACGG_ACAAGGGG_
47._RUQ_135
_TT-GGCCCCCC_GGACAAGGGGAA
48._RUQ_135
CC__GG_CCCCGG_ACAAGGGG_
49._RUQ_135
___CCCC_CC_GGACAA___
50._GC-05-101-3-3
GGAAGGCCGGGGCCGGGGACAACCCCAA
 7172737475767778798081828384
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
2._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
3._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
4._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
5._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
6._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
7._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
8._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
9._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
10._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
11._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
12._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
13._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
14._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
15._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
16._GC-05-161-4-14
CCCGAA_CCGGCCACGGACCCCCAAAC
17._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
18._GC-08-065-1-87
CCCGAACT_GGCCACGGACCCCCAAAC
19._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
20._RB_47_[BRA]
__AACT_____ACCC___
21._RB_47_[BRA]
__AACT_____ACCC___
22._RB_47_[BRA]
__AACT_____ACCC___
23._RB_47_[BRA]
__AACT_____ACCC___
24._RB_47_[BRA]
__AACT_____ACCC___
25._RB_47_[BRA]
__AACT_____ACCC___
26._RB_47_[BRA]
__AACT_____ACCC___
27._RB_47_[BRA]
__AACT_____ACCC___
28._RB_47_[BRA]
__AACT_____ACCC___
29._RB_47_[BRA]
__AACT_____ACCC___
30._RB_47_[BRA]
__AACT_____ACCC___
31._RB_47_[BRA]
__AACT_____ACCC___
32._RB_47_[BRA]
__AACT_____ACCC___
33._RB_47_[BRA]
__AACT_____ACCC___
34._RB_47_[BRA]
__AACT_____ACCC___
35._RB_47_[BRA]
__AACT_____ACCC___
36._RB_47_[BRA]
__AACT_____ACCC___
37._RB_47_[BRA]
__AACT_____ACCC___
38._RB_47_[BRA]
__AACT_____ACCC___
39._RB_47_[BRA]
__AACT_____ACCC___
40._RB_47_[BRA]
__AA______ACCC___
41._RB_47_[BRA]
__AACT_____ACCC___
42._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
43._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
44._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
45._RB_47_[BRA]
__AACT_____ACCC___
46._RB_47_[BRA]
__AACT_____ACCC___
47._RUQ_135
_________ACCC__AC
48._RUQ_135
__AACT_____ACCC___
49._RUQ_135
_CG________GG___
50._GC-05-101-3-3
___AGCCGGCCAC_AC_GGAAAC
 8586878889909192939495   
_Input profile
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
1._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
2._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
3._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
4._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
5._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
6._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
7._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
8._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
9._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
10._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
11._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
12._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
13._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
14._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
15._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
16._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
17._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
18._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
19._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
20._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
21._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
22._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
23._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
24._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
25._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
26._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
27._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
28._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
29._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
30._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
31._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
32._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
33._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
34._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
35._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
36._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
37._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
38._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
39._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
40._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
41._RB_47_[BRA]
CCCC____CTGGCC__X_XX_XX_X
42._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
43._GC-05-101-3-03
CCCCTT_AACCCTGGCCTTGGX_XX_XX_X
44._GC-08-065-1-87
CCCCTTTTAACCCTGGCTTTGGX_XX_XX_X
45._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
46._RB_47_[BRA]
CCCCTT_AA_CTGGCT__X_XX_XX_X
47._RUQ_135
CC___AACCCTGG___X_XX_XX_X
48._RUQ_135
CCCCCT_AA_CTGGCC__X_XX_XX_X
49._RUQ_135
_CC_________X_XX_XX_X
50._GC-05-101-3-3
GGGG_AA__AGCCGGAAGGX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-161-4-14

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

16._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240