SNP Profiles of PA-169   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTACGGAGCCCCCCCCGGTTCCTT
1._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
2._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
3._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
4._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
5._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
6._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
7._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
8._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
9._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
10._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
11._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
12._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
13._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
14._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
15._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
16._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
17._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
18._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
19._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
20._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
21._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
22._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
23._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
24._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
25._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
26._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
27._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
28._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
29._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
30._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
31._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
32._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
33._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
34._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
35._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
36._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
37._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
38._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
39._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
40._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
41._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
42._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
43._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
44._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
45._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
46._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
47._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
48._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
49._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
50._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
51._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
52._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
53._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
54._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
55._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
56._RUQ_1479
__CTAC__CC_CC__TTCC_
57._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
58._RUQ_1479
AAACCTAC____CCCCGG_CC_
59._RUQ_1479
___AC__CC_______
60._RUQ_1479
AAAC_ACGGAG_GGGG_GGAAGGAA
61._MITC-000600
AAAC_ACGGAG_GGGG_GGAAGGAA
 1516171819202122232425262728
_Input profile
AACCAAAGCCCCCCTTAATTGGAAAACC
1._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
2._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
3._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
4._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
5._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
6._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
7._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
8._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
9._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
10._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
11._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
12._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
13._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
14._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
15._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
16._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
17._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
18._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
19._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
20._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
21._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
22._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
23._GC-08-094-2-17
AACCAAAGCCCCCC_AATTGGAAAACC
24._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
25._GC-08-094-2-17
AACCAAAGCCCC_TTAATTGGAAAACC
26._GC-03-028-3-02
AACCAAAGCCCCCCTTAATTGGAAAACC
27._PA_169_[PER]
___AG__CC____AAAA_
28._PA_169_[PER]
___AG__CC____AAAA_
29._PA_169_[PER]
___AG__CC____AAAA_
30._PA_169_[PER]
___AG__CC____AAAA_
31._PA_169_[PER]
___AG__CC____AAAA_
32._PA_169_[PER]
___AG__CC____AAAA_
33._PA_169_[PER]
___AG__CC____AAAA_
34._PA_169_[PER]
___AG__CC____AAAA_
35._PA_169_[PER]
___AG__CC____AAAA_
36._PA_169_[PER]
___AG__CC____AAAA_
37._PA_169_[PER]
___AG__CC____AAAA_
38._PA_169_[PER]
___AG__CC____AAAA_
39._PA_169_[PER]
___AG__CC____AAAA_
40._PA_169_[PER]
___AG__CC____AAAA_
41._PA_169_[PER]
___AG__CC____AAAA_
42._PA_169_[PER]
___AG__CC____AAAA_
43._PA_169_[PER]
___AG__CC____AAAA_
44._PA_169_[PER]
___AG__CC____AAAA_
45._PA_169_[PER]
___AG__CC____AAAA_
46._PA_169_[PER]
___AG__CC____AAAA_
47._PA_169_[PER]
___AG__CC____AAAA_
48._PA_169_[PER]
___AG__CC____AAAA_
49._PA_169_[PER]
___AG__CC____AAAA_
50._PA_169_[PER]
___AG__CC____AAAA_
51._PA_169_[PER]
___AG__CC____AAAA_
52._PA_169_[PER]
___AG__CC____AAAA_
53._PA_169_[PER]
___AG__CC____AAAA_
54._PA_169_[PER]
___AG_______AAAA_
55._GC-08-094-2-17
AACCAAAGCCCCCCTTAATTGGAAAACC
56._RUQ_1479
_____CC____GG_AACC
57._PA_169_[PER]
___AG__CC____AAAA_
58._RUQ_1479
___AG__CC____AAAA_
59._RUQ_1479
___AGTT_________
60._RUQ_1479
TTCCAGAGGG_CCAAAGAAGGAAAAGG
61._MITC-000600
TTCCAGAGGG_CCAAAGAAGGAAAAGG
 2930313233343536373839404142
_Input profile
GGAATTTTAGGGCCAAGTGGGTAATTGG
1._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
2._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
3._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
4._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
5._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
6._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
7._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
8._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
9._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
10._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
11._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
12._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
13._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
14._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
15._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
16._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
17._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
18._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
19._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
20._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
21._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
22._GC-08-094-2-17
GGAA_TTAGGGCCAAGTGGGTAATTGG
23._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
24._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
25._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAATTGG
26._GC-03-028-3-02
GGAATTTTAGGGCCAAGTGGGTAATTGG
27._PA_169_[PER]
GGAA___GG_AAGT__AA__
28._PA_169_[PER]
GGAA___GG_AAGT__AA__
29._PA_169_[PER]
GGAA___GG_AAGT__AA__
30._PA_169_[PER]
GGAA___GG_AAGT__AA__
31._PA_169_[PER]
GGAA___GG_AAGT__AA__
32._PA_169_[PER]
GGAA___GG_AAGT__AA__
33._PA_169_[PER]
GGAA___GG_AAGT__AA__
34._PA_169_[PER]
GGAA___GG_AAGT__AA__
35._PA_169_[PER]
GGAA___GG_AAGT__AA__
36._PA_169_[PER]
GGAA___GG_AAGT__AA__
37._PA_169_[PER]
GGAA___GG_AAGT__AA__
38._PA_169_[PER]
GGAA___GG_AAGT__AA__
39._PA_169_[PER]
GGAA___GG_AAGT__AA__
40._PA_169_[PER]
GGAA___GG_AAGT__AA__
41._PA_169_[PER]
GGAA___GG_AAGT__AA__
42._PA_169_[PER]
GGAA___GG_AAGT__AA__
43._PA_169_[PER]
GGAA___GG_AAGT__AA__
44._PA_169_[PER]
GGAA___GG_AAGT__AA__
45._PA_169_[PER]
GGAA___GG_AAGT__AA__
46._PA_169_[PER]
GGAA___GG_AAGT__AA__
47._PA_169_[PER]
GGAA___GG_AAGT__AA__
48._PA_169_[PER]
GGAA___GG_AAGT__AA__
49._PA_169_[PER]
GGAA___GG_AAGT__AA__
50._PA_169_[PER]
GGAA___GG_AAGT__AA__
51._PA_169_[PER]
GGAA___GG_AAGT__AA__
52._PA_169_[PER]
GGAA___GG_AAGT__AA__
53._PA_169_[PER]
GGAA___GG_AAGT__AA__
54._PA_169_[PER]
GGAA___GG_AAGT__AA__
55._GC-08-094-2-17
GGAATTTTAGGGCCAAGTGGGTAACTGG
56._RUQ_1479
GG___AGGGCCAAGT__AATT_
57._PA_169_[PER]
GGAA___GG_AAGT__AA__
58._RUQ_1479
GGAA___GG_AAGT__AG__
59._RUQ_1479
GG____GG_AA____TT_
60._RUQ_1479
CCAAAAAAAGGGCCAAACCCACAAAAGG
61._MITC-000600
CCAAAAAAAGGGCCAAACCCACAAAAGG
 4344454647484950515253545556
_Input profile
CCGGTTCTGGAACCCCGGAGGTTTCCTT
1._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
2._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
3._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
4._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
5._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
6._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
7._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
8._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
9._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
10._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
11._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
12._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
13._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
14._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
15._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
16._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
17._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
18._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
19._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
20._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
21._GC-03-028-3-02
CCGGTTCTGGAACCCCGGAGGTTTCCTT
22._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
23._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
24._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
25._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
26._GC-03-028-3-02
CCGGTTCTGG_CCCCGGAG_TT_TT
27._PA_169_[PER]
___CT________CCTT
28._PA_169_[PER]
___CT________CCTT
29._PA_169_[PER]
___CT________CCTT
30._PA_169_[PER]
___CT________CCTT
31._PA_169_[PER]
___CT________CCTT
32._PA_169_[PER]
___CT________CCTT
33._PA_169_[PER]
___CT________CCTT
34._PA_169_[PER]
___CT________CCTT
35._PA_169_[PER]
___CT________CCTT
36._PA_169_[PER]
___CT________CCTT
37._PA_169_[PER]
___CT________CCTT
38._PA_169_[PER]
___CT________CCTT
39._PA_169_[PER]
___CT________CCTT
40._PA_169_[PER]
___CT________CCTT
41._PA_169_[PER]
___CT________CCTT
42._PA_169_[PER]
___CT________CCTT
43._PA_169_[PER]
___CT________CCTT
44._PA_169_[PER]
___CT________CCTT
45._PA_169_[PER]
___CT________CCTT
46._PA_169_[PER]
___CT________CCTT
47._PA_169_[PER]
___CT________CCTT
48._PA_169_[PER]
___CT________CCTT
49._PA_169_[PER]
___CT________CCTT
50._PA_169_[PER]
___CT________CCTT
51._PA_169_[PER]
___CT________CCTT
52._PA_169_[PER]
___CT_________TT
53._PA_169_[PER]
___CT________CCTT
54._PA_169_[PER]
___CT________CCTT
55._GC-08-094-2-17
CCGGTTCTGGAACCCCGGAGGTTTCCTT
56._RUQ_1479
_GGTT_GG______TTCC_
57._PA_169_[PER]
___CT________CCTT
58._RUQ_1479
___CT________CCTT
59._RUQ_1479
____GG_________
60._RUQ_1479
GGCC_AGGGAAGG_GGAGACAAGGAA
61._MITC-000600
GGCC_AGGGAAGG_GGAGACAAGGAA
 5758596061626364656667686970
_Input profile
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
1._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
2._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
3._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
4._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
5._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
6._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
7._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
8._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
9._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
10._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
11._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
12._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
13._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
14._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
15._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
16._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
17._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
18._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
19._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
20._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
21._GC-03-028-3-02
TTGGCC_CCAAGGGGAAAAGTGGGGCC
22._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
23._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
24._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
25._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGT_GGCC
26._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
27._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
28._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
29._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
30._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
31._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
32._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
33._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
34._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
35._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
36._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
37._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
38._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
39._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
40._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
41._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
42._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
43._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
44._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
45._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
46._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
47._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
48._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
49._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
50._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
51._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
52._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
53._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
54._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
55._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGGGCC
56._RUQ_1479
TTGGCCCCCCAA_GGAAAAGTGGGG_
57._PA_169_[PER]
__CC_CCAAGG_AAAAGTGG__
58._RUQ_1479
__CC_CCAAGG_AAAAGTGG__
59._RUQ_1479
_GG______AAAA_GGGG_
60._RUQ_1479
AAGGGGGGGGAAGGGGAAAAACCCGG_
61._MITC-000600
AAGGGGGGGGAAGGGGAAAAACCCGG_
 7172737475767778798081828384
_Input profile
CGAGTTCCGGCCCCAGAAGGCCAAAACT
1._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
2._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
3._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
4._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
5._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
6._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
7._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
8._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
9._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
10._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
11._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
12._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
13._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
14._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
15._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
16._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
17._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
18._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
19._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
20._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
21._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
22._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
23._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
24._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
25._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
26._GC-03-028-3-02
CGAGTTCCGGCCCCAGAAGGCCAAAACT
27._PA_169_[PER]
_AGTT_____AAGG___CT
28._PA_169_[PER]
_AGTT_____AAGG___CT
29._PA_169_[PER]
_AGTT_____AAGG___CT
30._PA_169_[PER]
_AGTT_____AAGG___CT
31._PA_169_[PER]
_AGTT_____AAGG___CT
32._PA_169_[PER]
_AGTT_____AAGG___CT
33._PA_169_[PER]
_AGTT_____AAGG___CT
34._PA_169_[PER]
_AGTT_____AAGG___CT
35._PA_169_[PER]
_AGTT_____AAGG___CT
36._PA_169_[PER]
_AGTT_____AAGG___CT
37._PA_169_[PER]
_AGTT_____AAGG___CT
38._PA_169_[PER]
_AGTT_____AAGG___CT
39._PA_169_[PER]
_AGTT_____AAGG___CT
40._PA_169_[PER]
_AGTT_____AAGG___CT
41._PA_169_[PER]
_AGTT_____AAGG___CT
42._PA_169_[PER]
_AGTT_____AAGG___CT
43._PA_169_[PER]
_AGTT_____AAGG___CT
44._PA_169_[PER]
_AGTT_____AAGG___CT
45._PA_169_[PER]
_AGTT_____AAGG___CT
46._PA_169_[PER]
_AGTT_____AAGG___CT
47._PA_169_[PER]
_AGTT_____AAGG___CT
48._PA_169_[PER]
_AGTT_____AAGG___CT
49._PA_169_[PER]
_AGTT_____AAGG___CT
50._PA_169_[PER]
_AGTT_____AAGG___CT
51._PA_169_[PER]
_AGTT_____AAGG___CT
52._PA_169_[PER]
_AGTT_____AAGG___CT
53._PA_169_[PER]
_AGTT_____AAGG___CT
54._PA_169_[PER]
_AGTT_____AAGG___CT
55._GC-08-094-2-17
CGAGTTCCGGCCCCAGAAGGCCAAAACT
56._RUQ_1479
________AAGG__AACT
57._PA_169_[PER]
_AATT_____AAGG___CT
58._RUQ_1479
_AATT_____AAGG___CT
59._RUQ_1479
_AA______AAGG__AA_
60._RUQ_1479
__AACCGGCCCC_AACCGGAAAAAG
61._MITC-000600
__AACCGGCCCC_AACCGGAAAAAG
 85868788899091929394    
_Input profile
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
1._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
2._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
3._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
4._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
5._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
6._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
7._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
8._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
9._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
10._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
11._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
12._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
13._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
14._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
15._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
16._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
17._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
18._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
19._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
20._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
21._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
22._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
23._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
24._GC-08-094-2-17
_CCCCAACTCCTTTTATGGX_XX_XX_XX_X
25._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
26._GC-03-028-3-02
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
27._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
28._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
29._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
30._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
31._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
32._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
33._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
34._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
35._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
36._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
37._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
38._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
39._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
40._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
41._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
42._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
43._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
44._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
45._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
46._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
47._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
48._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
49._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
50._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
51._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
52._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
53._PA_169_[PER]
_CC_AA_CCTTTT__X_XX_XX_XX_X
54._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
55._GC-08-094-2-17
CTCCCCAACTCCTTTTATGGX_XX_XX_XX_X
56._RUQ_1479
___AACCCCTT___X_XX_XX_XX_X
57._PA_169_[PER]
CTCC_AA_CCTTTT__X_XX_XX_XX_X
58._RUQ_1479
CTCC_AA_CCTTTT__X_XX_XX_XX_X
59._RUQ_1479
_CC__CT_TT___X_XX_XX_XX_X
60._RUQ_1479
AG_GG__GGAAAAATGGX_XX_XX_XX_X
61._MITC-000600
AG_GG__GGAAAAATGGX_XX_XX_XX_X

Input profile: PA_169_[PER] GC-03-028-3-02

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

1._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

3._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

4._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

5._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

6._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP3
 Mars, 2018

7._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

8._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

9._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

10._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

11._PA_169_[PER] GC-03-028-3-02

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

12._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

13._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

14._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

15._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

16._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

17._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

18._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

19._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

20._PA_169_[PER] GC-08-094-2-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

21._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 17
Notes: 17
 Mars, 2018

23._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

24._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._PA_169_[PER] GC-08-094-2-17

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

26._PA_169_[PER] GC-03-028-3-02

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

27._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 3
 Dapeng Zhang, 2016

28._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 11 > F
 Dapeng Zhang, 2016

29._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 10 > F
 Dapeng Zhang, 2016

30._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 1 > FP
 Dapeng Zhang, 2016

31._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 16
 Dapeng Zhang, 2016

32._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 15
 Dapeng Zhang, 2016

33._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 14
 Dapeng Zhang, 2016

34._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 13
 Dapeng Zhang, 2016

35._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 6
 Dapeng Zhang, 2016

36._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 3
 Dapeng Zhang, 2016

37._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

38._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 4
 Dapeng Zhang, 2016

39._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 2 > FP
 Dapeng Zhang, 2016

40._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 1 > FP
 Dapeng Zhang, 2016

41._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 18
 Dapeng Zhang, 2016

42._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 17
 Dapeng Zhang, 2016

43._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 16
 Dapeng Zhang, 2016

44._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 15
 Dapeng Zhang, 2016

45._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 14
 Dapeng Zhang, 2016

46._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 13
 Dapeng Zhang, 2016

47._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 12
 Dapeng Zhang, 2016

48._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 11
 Dapeng Zhang, 2016

49._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 8
 Dapeng Zhang, 2016

50._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 6
 Dapeng Zhang, 2016

51._PA_169_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 5
 Dapeng Zhang, 2016

52._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 8
 Dapeng Zhang, 2016

53._PA_169_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 9
 Dapeng Zhang, 2016

54._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 7 > FP
 Dapeng Zhang, 2016

55._PA_169_[PER] GC-08-094-2-17

99.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

56._PA_169_[PER] RUQ_1479

98.8 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

57._PA_169_[PER]

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 491
 Dapeng Zhang, 2016

58._PA_169_[PER] RUQ_1479

97.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

59._PA_169_[PER] RUQ_1479

92.9 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._PA_169_[PER] RUQ_1479

49.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

61._PA_169_[PER] MITC-000600

49.4 %
81 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240