SNP Profiles of TSH-565   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTCCGGAGCTCTTTTTGGTTCTCT
1._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
2._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
3._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
4._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
5._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
6._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
7._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
8._GC-01-005-1-05
AAACCTCCGG_CTCTTTTTGGTTCTCT
9._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
10._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
11._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
12._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
13._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
 1516171819202122232425262728
_Input profile
ATACAAAGCGCGCGCTAACTAGAAAAGG
1._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
2._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
3._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
4._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
5._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
6._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
7._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
8._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
9._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
10._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
11._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
12._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
13._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
 2930313233343536373839404142
_Input profile
CCATCTGTAGCGACAAGTGTGTAACTAG
1._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
2._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
3._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
4._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
5._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
6._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
7._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
8._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
9._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
10._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
11._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
12._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
13._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
 4344454647484950515253545556
_Input profile
CCGGATCCAGAGAACTACAGAGGTTTCT
1._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
2._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
3._GC-01-005-1-05
CCGGATCCAGAG_CTACAGAGGTTTCT
4._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
5._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
6._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
7._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
8._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
9._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
10._GC-01-005-1-05
CCGGATCCAGAGAACTACAGAGGTTTCT
11._TSH_565
GGCC_GG_AGAAAG_AGAGACAGAG
12._TSH_565
GGCC_GG_AGAAAG_AGAGACAGAG
13._TSH_565
GGCC_GG_AGAAAG_AGAGACAGAG
 5758596061626364656667686970
_Input profile
CTGTAGCGCTCCACCGAGACAAGTGTAG
1._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
2._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
3._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
4._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
5._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
6._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
7._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
8._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
9._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
10._GC-01-005-1-05
CTGTAGCGCTCCACCGAGACAAGTGTAG
11._TSH_565
AGACAGCGAGGGACCGAGACAAACACAG
12._TSH_565
AGACAGCGAGGGACCGAGACAAACACAG
13._TSH_565
AGACAGCGAGGGACCGAGACAAACACAG
 7172737475767778798081828384
_Input profile
CCCGAGCTACGGCCACAAACCGCTAACC
1._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
2._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
3._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
4._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
5._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
6._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
7._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
8._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
9._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
10._GC-01-005-1-05
CCCGAGCTACGGCCACAAACCGCTAACC
11._TSH_565
___AGACGGCCAC_ACCGAGAACC
12._TSH_565
___AGACGGCCAC_ACCGAGAACC
13._TSH_565
___AGACGGCCAC_ACCGAGAACC
 8586878889909192939495   
_Input profile
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
1._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
2._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
3._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
4._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
5._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
6._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
7._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
8._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
9._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
10._GC-01-005-1-05
TTCTCTCTAGCTCCGTCTATAGX_XX_XX_X
11._TSH_565
AAAG_AG__GGACAGATAGX_XX_XX_X
12._TSH_565
AAAG_AG__GGACAGATAGX_XX_XX_X
13._TSH_565
AAAG_AG__GGACAGATAGX_XX_XX_X

Input profile: TSH_565 GC-01-005-1-05

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

1._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

4._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

7._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

8._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

9._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

10._TSH_565 GC-01-005-1-05

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

11._TSH_565

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 4
 Mars, 2018

12._TSH_565

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 2
 Mars, 2018

13._TSH_565

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 1
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240