SNP Profiles of "TSH 565"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
2. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
3. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
4. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
5. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
6. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
7. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
8. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
9. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
10. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
11. _GC-01-005-1-05
CGGTAAGGCTTTACCTACGTCTATAGAC
12. _Tree:_FP_4
CGACAAGGAGAAACAGACACAGATAGAC
13. _Tree:_FP_1
CGACAAGGAGAAACAGACACAGATAGAC
14. _Tree:_FP_2
CGACAAGGAGAAACAGACACAGATAGAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
2. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
3. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
4. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
5. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
6. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
7. _GC-01-005-1-05
CGAAAGCCATAGAGAACT___GGAAGGAG
8. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
9. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
10. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
11. _GC-01-005-1-05
CGAAAGCCATAGAGAACTAGGGAAGGAG
12. _Tree:_FP_4
CGAAAGGGATAGAGAAAGAGGGAACC___
13. _Tree:_FP_1
CGAAAGGGATAGAGAAAGAGGGAACC___
14. _Tree:_FP_2
CGAAAGGGATAGAGAAAGAGGGAACC___
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
2. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
3. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
4. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
5. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
6. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
7. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
8. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
9. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
10. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
11. _GC-01-005-1-05
___ACACCTAGGTAGCGCCCTAGTTAGAA
12. _Tree:_FP_4
AGACAC___AGACAGCGCCAG___AA___AG
13. _Tree:_FP_1
AGACAC___AGACAGCGCCAG___AA___AG
14. _Tree:_FP_2
AGACAC___AGACAGCGCCAG___AA___AG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-005-1-05
___CCCTGTAGGTGTGTCCCGAACCCGCT
2. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
3. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
4. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
5. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
6. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
7. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
8. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
9. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
10. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
11. _GC-01-005-1-05
AACCCTGTAGGTGTGTCCCGAACCCGCT
12. _Tree:_FP_4
AA______ACAGACACACCCCGAAGG___AG
13. _Tree:_FP_1
AA______ACAGACACACCCCGAAGG___AG
14. _Tree:_FP_2
AA______ACAGACACACCCCGAAGG___AG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
2. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
3. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
4. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
5. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
6. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
7. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
8. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
9. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
10. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
11. _GC-01-005-1-05
CCAGCTCGCTATCTAACTCTCGTTAGGG
12. _Tree:_FP_4
GGAGAGCGAGATAGAA___AG___AAAGCC
13. _Tree:_FP_1
GGAGAGCGAGATAGAA___AG___AAAGCC
14. _Tree:_FP_2
GGAGAGCGAGATAGAA___AG___AAAGCC
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
2. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
3. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
4. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
5. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
6. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
7. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
8. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
9. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
10. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
11. _GC-01-005-1-05
AACTAGATCTCTCTTTGTACGTCCTTAC
12. _Tree:_FP_4
AAAGAG______AGAG___AC___ACGGAGAC
13. _Tree:_FP_1
AAAGAG______AGAG___AC___ACGGAGAC
14. _Tree:_FP_2
AAAGAG______AGAG___AC___ACGGAGAC
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
2. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
3. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
4. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
5. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
6. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
7. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
8. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
9. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
10. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
11. _GC-01-005-1-05
AGCTCTCCCGAACTCCAAACGGACX_XX_X
12. _Tree:_FP_4
AGAGAGGGCGAAAGCC___ACGGACX_XX_X
13. _Tree:_FP_1
AGAGAGGGCGAAAGCC___ACGGACX_XX_X
14. _Tree:_FP_2
AGAGAGGGCGAAAGCC___ACGGACX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._TSH_565 GC-01-005-1-05
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._TSH_565 GC-01-005-1-05
Location: Tree: 2
Notes: 2
 Mars, 2018
3._TSH_565 GC-01-005-1-05
Location: Tree: 3
Notes: 3
 Mars, 2018
4._TSH_565 GC-01-005-1-05
Location: Tree: 4
Notes: 4
 Mars, 2018
5._TSH_565 GC-01-005-1-05
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018
6._TSH_565 GC-01-005-1-05
Location: Tree: 7
Notes: 7
 Mars, 2018
7._TSH_565 GC-01-005-1-05
Location: Tree: 8
Notes: 8
 Mars, 2018
8._TSH_565 GC-01-005-1-05
Location: Tree: 9
Notes: 9
 Mars, 2018
9._TSH_565 GC-01-005-1-05
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018
10._TSH_565 GC-01-005-1-05
Location: Tree: 13
Notes: 13
 Mars, 2018
11._TSH_565 GC-01-005-1-05
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018
12._TSH_565
Location: Tree: FP 4
 Mars, 2018
13._TSH_565
Location: Tree: FP 1
 Mars, 2018
14._TSH_565
Location: Tree: FP 2
 Mars, 2018

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133