SNP Profiles of TSH-565   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTCCGGAGCTCTTTTTGGTTCTCT
1._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
2._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
3._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
4._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
5._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
6._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
7._GC-01-005-1-05
AAACCTCCGG_CTCTTTTTGGTTCTCT
8._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
9._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
10._GC-01-005-1-05
AAACCTCCGGAGCTCTTTTTGGTTCTCT
11._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
12._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
13._TSH_565
AAAC_CCGGAG_AGAA_GGAAAGAG
 1516171819202122232425262728
_Input profile
ATACAAAGCGCGCGCTAACTAGAAAAGG
1._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
2._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
3._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
4._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
5._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
6._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
7._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
8._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
9._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
10._GC-01-005-1-05
ATACAAAGCGCGCGCTAACTAGAAAAGG
11._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
12._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
13._TSH_565
ATACAAAGCG_CGAGAGAGAGAAAACC
 2930313233343536373839404142
_Input profile
CCATCTGTAGCGACAAGTGTGTAACTAG
1._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
2._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
3._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
4._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
5._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
6._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
7._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
8._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
9._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
10._GC-01-005-1-05
CCATCTGTAGCGACAAGTGTGTAACTAG
11._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
12._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
13._TSH_565
GGATAGACAGCGACAAACACACAAAGAG
 4344454647484950515253545556
_Input profile
CCGGATCCAGAGCTACAGAGGTTTCTCT
1._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
2._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
3._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
4._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
5._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
6._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
7._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
8._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
9._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
10._GC-01-005-1-05
CCGGATCCAGAGCTACAGAGGTTTCTCT
11._TSH_565
GGCC_GG_AGAG_AGAGACAGAGAG
12._TSH_565
GGCC_GG_AGAG_AGAGACAGAGAG
13._TSH_565
GGCC_GG_AGAG_AGAGACAGAGAG
 5758596061626364656667686970
_Input profile
GTAGCGCTCCACCGAGACAAGTGTAGCC
1._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
2._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
3._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
4._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
5._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
6._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
7._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
8._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
9._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
10._GC-01-005-1-05
GTAGCGCTCCACCGAGACAAGTGTAGCC
11._TSH_565
ACAGCGAGGGACCGAGACAAACACAG_
12._TSH_565
ACAGCGAGGGACCGAGACAAACACAG_
13._TSH_565
ACAGCGAGGGACCGAGACAAACACAG_
 7172737475767778798081828384
_Input profile
CGAGCTACGGCCACAAACCGCTAACCTT
1._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
2._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
3._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
4._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
5._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
6._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
7._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
8._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
9._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
10._GC-01-005-1-05
CGAGCTACGGCCACAAACCGCTAACCTT
11._TSH_565
__AGACGGCCAC_ACCGAGAACCAA
12._TSH_565
__AGACGGCCAC_ACCGAGAACCAA
13._TSH_565
__AGACGGCCAC_ACCGAGAACCAA
 85868788899091929394    
_Input profile
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
1._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
2._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
3._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
4._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
5._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
6._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
7._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
8._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
9._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
10._GC-01-005-1-05
CTCTCTAGCTCCGTCTATAGX_XX_XX_XX_X
11._TSH_565
AG_AG__GGACAGATAGX_XX_XX_XX_X
12._TSH_565
AG_AG__GGACAGATAGX_XX_XX_XX_X
13._TSH_565
AG_AG__GGACAGATAGX_XX_XX_XX_X

Input profile: TSH_565 GC-01-005-1-05

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

1._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

6._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

7._TSH_565 GC-01-005-1-05

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

8._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

9._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

10._TSH_565 GC-01-005-1-05

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

11._TSH_565

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 4
 Mars, 2018

12._TSH_565

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 2
 Mars, 2018

13._TSH_565

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 1
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240