SNP Profiles of GU241/P View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	CG	CC	TT	CC	TT	TT	CC	CC	AA	GG	CC	AA
1._RUQ_1431	_	_	CG	_	_	_	_	TT	_	CC	_	GG	_	AA
2._GU_241_/P	CC	AG	CG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
3._GU_241_/P	CC	AG	CG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
4._GU_241_/P	CC	AG	CG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
5._GU_241_/P	CC	AG	CG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
6._GU_241_/P	_	AG	CG	CC	TT	_	TT	TT	CC	CC	AA	GG	CC	AA
7._RUQ_1431	_	AG	CG	CC	_	_	_	TT	_	_	_	_	CC	AA
8._GU_241_/P	CC	AG	CG	CC	TT	CC	TT	TT	CC	CC	AA	GG	CC	AA
9._RUQ_1431	GG	AG	CG	GG	AA	CC	AA	AA	_	_	AA	GG	GG	AA
10._MITC-000612	GG	AG	CG	GG	AA	CC	AA	AA	_	_	AA	GG	GG	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
1._RUQ_1431	_	_	_	_	_	GG	GG	AG	_	AC	CC	_	_	AA
2._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
3._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
4._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
5._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
6._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
7._RUQ_1431	_	_	_	_	CC	GG	GG	_	CC	AC	CC	GG	CC	AA
8._GU_241_/P	CT	AA	GG	CC	CC	GG	GG	AG	CC	AC	CC	GG	CC	AA
9._RUQ_1431	AG	AA	GG	GG	GG	CC	CC	_	GG	AC	CC	CC	_	AA
10._MITC-000612	AG	AA	GG	GG	GG	CC	CC	_	GG	AC	CC	CC	_	AA

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	GG	AA	CC	GG	CC	AA	TT	GT	AA	AT	GG	X_X	X_X
1._RUQ_1431	_	_	_	_	GG	_	_	_	_	AA	_	_	X_X	X_X
2._GU_241_/P	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AT	GG	X_X	X_X
3._GU_241_/P	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AT	GG	X_X	X_X
4._GU_241_/P	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AT	GG	X_X	X_X
5._GU_241_/P	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AT	GG	X_X	X_X
6._GU_241_/P	AG	GG	AA	CC	GG	CC	AA	TT	TT	AA	AT	GG	X_X	X_X
7._RUQ_1431	AG	_	AA	CC	GG	CC	AA	TT	TT	AA	_	_	X_X	X_X
8._GU_241_/P	AG	AG	AA	CC	GG	_	AA	TT	TT	AA	AT	GG	X_X	X_X
9._RUQ_1431	_	GG	AA	GG	GG	GG	AA	AA	AA	AA	AT	GG	X_X	X_X
10._MITC-000612	_	GG	AA	GG	GG	GG	AA	AA	AA	AA	AT	GG	X_X	X_X

Input profile: GU_241_/P RUQ_1431

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

1._GU_241_/P RUQ_1431

identical
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

2._GU_241_/P

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8838 10

Dapeng Zhang, 2016

3._GU_241_/P

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8838 3

Dapeng Zhang, 2016

4._GU_241_/P

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8838 2

Dapeng Zhang, 2016

5._GU_241_/P

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8838 1

Dapeng Zhang, 2016

6._GU_241_/P

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8838 9

Dapeng Zhang, 2016

7._GU_241_/P RUQ_1431

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._GU_241_/P

97.4 %
39 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: CAMPUS 1 A X2 Y33

Dapeng Zhang, 2016

9._GU_241_/P RUQ_1431

51.4 %
35 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

10._GU_241_/P MITC-000612

51.4 %
35 shared markers

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USDA-SHRS, United States of America

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25