SNP Profiles of "GU 241 /P" View Data

Key

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
1. _8838_1	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
2. _8838_2	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
3. _8838_3	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
4. _8838_9	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
5. _8838_10	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
6. _RUQ_1431	TT	AC	___	___	___	TT	___	CC	GG	___	___	___	___	TT
7. _RUQ_1431	___	___	GG	CC	AT	___	GG	___	___	GG	AA	CC	AA	___
8. _RUQ_1431	___	___	___	___	___	___	___	___	___	___	TT	CC	___	___
9. _RUQ_1431	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
10. _CAMPUS_1_A_X2_Y33	___	___	GG	___	AT	___	___	___	___	___	___	___	___	___
11. _MITC-000612	___	___	GG	CC	AT	___	GG	___	___	GG	AA	CC	AA	___

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
1. _8838_1	___	AA	TT	TT	___	___	___	___	AA	___	CC	GG	___	CC
2. _8838_2	___	AA	TT	TT	___	___	___	___	AA	___	CC	GG	___	CC
3. _8838_3	___	AA	TT	TT	___	___	___	___	AA	___	CC	GG	___	CC
4. _8838_9	___	AA	TT	TT	___	___	___	___	AA	___	CC	GG	___	CC
5. _8838_10	___	AA	TT	TT	___	___	___	___	AA	___	CC	GG	___	CC
6. _RUQ_1431	AA	AA	___	___	___	___	CC	GG	___	GG	___	GG	___	___
7. _RUQ_1431	___	AA	AA	AA	TT	GG	___	___	AA	___	GG	GG	GG	GG
8. _RUQ_1431	___	AA	TT	TT	___	GG	___	___	AA	___	CC	GG	___	CC
9. _RUQ_1431	___	AA	GT	TT	___	___	___	___	AA	___	CC	GG	___	CC
10. _CAMPUS_1_A_X2_Y33	___	AA	TT	TT	___	___	___	___	AA	___	___	GG	___	CC
11. _MITC-000612	___	AA	AA	AA	TT	GG	___	___	AA	___	GG	GG	GG	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
1. _8838_1	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
2. _8838_2	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
3. _8838_3	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
4. _8838_9	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
5. _8838_10	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
6. _RUQ_1431	CC	AA	___	AG	AA	___	___	___	___	TT	___	___	___	___
7. _RUQ_1431	___	___	TT	AG	___	GG	AA	AA	GG	___	GG	TT	GG	___
8. _RUQ_1431	___	___	___	AG	___	GG	AA	___	___	___	___	___	CC	AG
9. _RUQ_1431	___	___	___	___	___	___	AA	___	___	___	GG	___	___	AG
10. _CAMPUS_1_A_X2_Y33	___	___	___	___	___	___	AA	___	___	___	AG	___	___	AG
11. _MITC-000612	___	___	TT	AG	___	GG	AA	AA	GG	___	GG	TT	GG	___

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
1. _8838_1	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
2. _8838_2	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
3. _8838_3	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
4. _8838_9	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
5. _8838_10	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
6. _RUQ_1431	___	CC	___	CC	AA	___	AG	___	___	___	CC	AA	AC	CC
7. _RUQ_1431	AA	___	CC	___	AA	___	___	GG	CC	GG	CC	___	AC	GG
8. _RUQ_1431	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	CC
9. _RUQ_1431	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
10. _CAMPUS_1_A_X2_Y33	___	___	___	___	AA	CC	___	___	GG	___	CC	___	AC	___
11. _MITC-000612	AA	___	CC	___	AA	___	___	GG	CC	GG	CC	___	AC	GG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
1. _8838_1	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
2. _8838_2	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
3. _8838_3	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
4. _8838_9	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
5. _8838_10	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
6. _RUQ_1431	___	CC	AA	CC	AG	___	CC	___	CC	GG	AA	CT	___	___
7. _RUQ_1431	GG	___	___	___	___	AG	___	AA	___	CC	AA	___	AC	AA
8. _RUQ_1431	CC	___	___	___	___	___	___	___	CC	GG	AA	___	___	___
9. _RUQ_1431	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
10. _CAMPUS_1_A_X2_Y33	CC	___	___	___	AG	___	___	___	___	GG	___	___	___	___
11. _MITC-000612	GG	___	___	___	___	AG	___	AA	___	CC	AA	___	AC	AA

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
1. _8838_1	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
2. _8838_2	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
3. _8838_3	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
4. _8838_9	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
5. _8838_10	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
6. _RUQ_1431	___	TT	AA	AA	CC	___	GG	___	___	___	GG	___	___	___
7. _RUQ_1431	AA	___	AA	___	CC	GG	CC	___	GG	GG	GG	GG	GG	GG
8. _RUQ_1431	TT	___	AA	___	___	___	GG	CC	CC	___	GG	___	___	___
9. _RUQ_1431	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
10. _CAMPUS_1_A_X2_Y33	___	___	___	___	___	___	GG	___	CC	___	___	CC	GG	___
11. _MITC-000612	AA	___	AA	___	CC	GG	CC	___	GG	GG	GG	GG	GG	GG

	85	86	87	88	89	90	91	92	93	94	95	96	97	98
1. _8838_1	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
2. _8838_2	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
3. _8838_3	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
4. _8838_9	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
5. _8838_10	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
6. _RUQ_1431	CC	___	___	AA	CC	CC	AA	___	TT	___	GG	___	___	___
7. _RUQ_1431	___	AA	AG	AA	___	___	___	AA	___	GG	GG	CC	AA	GG
8. _RUQ_1431	___	___	___	AA	CC	___	___	___	___	CC	___	GG	___	___
9. _RUQ_1431	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
10. _CAMPUS_1_A_X2_Y33	___	AA	CT	AA	___	___	___	___	___	CC	GG	___	AA	___
11. _MITC-000612	___	AA	AG	AA	___	___	___	AA	___	GG	GG	CC	AA	GG

	99	100	101	102	103	104	105	106	107	108	109	110	111	112
1. _8838_1	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
2. _8838_2	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
3. _8838_3	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
4. _8838_9	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
5. _8838_10	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
6. _RUQ_1431	___	CT	___	CC	___	___	___	___	GT	AA	TT	___	GG	TT
7. _RUQ_1431	GG	___	___	___	AA	GG	___	AA	___	___	AA	AA	___	___
8. _RUQ_1431	GG	___	TT	___	___	___	___	___	___	___	TT	___	___	___
9. _RUQ_1431	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
10. _CAMPUS_1_A_X2_Y33	___	___	___	CC	___	___	CC	___	___	___	TT	TT	___	___
11. _MITC-000612	GG	___	___	___	AA	GG	___	AA	___	___	AA	AA	___	___

	113	114	115	116	117	118	119	120	121	122	123	124	125	126
1. _8838_1	___	___	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
2. _8838_2	___	___	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
3. _8838_3	___	___	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
4. _8838_9	___	___	___	___	___	TT	___	CC	CG	AG	___	___	___	___
5. _8838_10	___	___	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
6. _RUQ_1431	___	___	___	AA	GG	___	___	___	CG	___	___	TT	AA	___
7. _RUQ_1431	AA	CC	GG	___	___	AA	GG	GG	CG	AG	GG	___	___	CC
8. _RUQ_1431	TT	___	___	___	___	___	CC	CC	CG	AG	___	___	___	___
9. _RUQ_1431	___	CC	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
10. _CAMPUS_1_A_X2_Y33	___	CC	___	___	___	TT	___	CC	CG	AG	CC	___	___	___
11. _MITC-000612	AA	CC	GG	___	___	AA	GG	GG	CG	AG	GG	___	___	CC

	127	128	129
1. _8838_1	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2. _8838_2	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3. _8838_3	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4. _8838_9	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5. _8838_10	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6. _RUQ_1431	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7. _RUQ_1431	AC	AG	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8. _RUQ_1431	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9. _RUQ_1431	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10. _CAMPUS_1_A_X2_Y33	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11. _MITC-000612	AC	AG	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Key

Mars Center for Cocoa Science Brazil

1._GU_241_/P

Location: 8838 1

2._GU_241_/P

Location: 8838 2

3._GU_241_/P

Location: 8838 3

4._GU_241_/P

Location: 8838 9

5._GU_241_/P

Location: 8838 10

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

6._GU_241_/P RUQ 1431

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Lambert Motilal, 2023

7._GU_241_/P RUQ 1431

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Notes: Reading_Collection

Mars, 2018

8._GU_241_/P RUQ 1431

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Dapeng Zhang, 2014

9._GU_241_/P RUQ 1431

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Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

10._GU_241_/P

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Location: CAMPUS 1 A X2 Y33

Dapeng Zhang, 2016

USDA-SHRS United States of America

11._GU_241_/P MITC-000612

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Mars, 2018

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP25	4	TcSNP28	5	TcSNP32
6	TcSNP33	7	TcSNP42	8	TcSNP49	9	TcSNP52	10	TcSNP60
11	TcSNP75	12	TcSNP90	13	TcSNP122	14	TcSNP131	15	TcSNP143
16	TcSNP144	17	TcSNP150	18	TcSNP151	19	TcSNP154	20	TcSNP174
21	TcSNP176	22	TcSNP189	23	TcSNP193	24	TcSNP194	25	TcSNP226
26	TcSNP230	27	TcSNP240	28	TcSNP242	29	TcSNP290	30	TcSNP305
31	TcSNP316	32	TcSNP329	33	TcSNP363	34	TcSNP364	35	TcSNP372
36	TcSNP413	37	TcSNP418	38	TcSNP421	39	TcSNP429	40	TcSNP430
41	TcSNP448	42	TcSNP469	43	TcSNP497	44	TcSNP519	45	TcSNP521
46	TcSNP522	47	TcSNP529	48	TcSNP534	49	TcSNP546	50	TcSNP547
51	TcSNP560	52	TcSNP561	53	TcSNP577	54	TcSNP589	55	TcSNP591
56	TcSNP602	57	TcSNP619	58	TcSNP640	59	TcSNP642	60	TcSNP644
61	TcSNP645	62	TcSNP653	63	TcSNP660	64	TcSNP689	65	TcSNP702
66	TcSNP723	67	TcSNP731	68	TcSNP739	69	TcSNP751	70	TcSNP776
71	TcSNP799	72	TcSNP800	73	TcSNP823	74	TcSNP835	75	TcSNP836
76	TcSNP860	77	TcSNP872	78	TcSNP878	79	TcSNP891	80	TcSNP894
81	TcSNP899	82	TcSNP917	83	TcSNP929	84	TcSNP944	85	TcSNP945
86	TcSNP953	87	TcSNP994	88	TcSNP998	89	TcSNP999	90	TcSNP1010
91	TcSNP1019	92	TcSNP1034	93	TcSNP1053	94	TcSNP1060	95	TcSNP1062
96	TcSNP1063	97	TcSNP1075	98	TcSNP1096	99	TcSNP1111	100	TcSNP1112
101	TcSNP1126	102	TcSNP1144	103	TcSNP1149	104	TcSNP1156	105	TcSNP1165
106	TcSNP1175	107	TcSNP1205	108	TcSNP1230	109	TcSNP1253	110	TcSNP1270
111	TcSNP1275	112	TcSNP1293	113	TcSNP1309	114	TcSNP1350	115	TcSNP1383
116	TcSNP1401	117	TcSNP1404	118	TcSNP1414	119	TcSNP1439	120	TcSNP1442
121	TcSNP1458	122	TcSNP1484	123	TcSNP1520	124	TcSNP1524	125	TcSNP1527
126	Tcm001s00947643	127	Tcm003s01336581	128	Tcm003s07402719	129	Tcm006s26664133