SNP Profiles of NA232   View Data

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 Key

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_Input profile
GGCCTTGGCCCCTTCCGGCCGGTTAACC
1._RUQ_1504
CCCCTTGGCC__CCCCGG___CC
2._RUQ_1504
CC________GG___CC
3._RUQ_1504
GGGG_GGGG_AAGG_CCGGAA_GG
4._MITC-000043
GGGG_GGGG_AAGG_CCGGAA_GG
 151617181920212223242526  
_Input profile
AAGGCCCCAAGGAAGGAAGGCCCCX_XX_X
1._RUQ_1504
AAGGCC_AAGGAACCAAGGCCCCX_XX_X
2._RUQ_1504
AAGG_________CCX_XX_X
3._RUQ_1504
AAGGGGGGAAGGAAGGAAGGGGCCX_XX_X
4._MITC-000043
AAGGGGGGAAGGAAGGAAGGGGCCX_XX_X

Input profile: NA_232 RUQ_1504

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

1._NA_232 RUQ_1504

80 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._NA_232 RUQ_1504

66.7 %
6 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._NA_232 RUQ_1504

59.1 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._NA_232 MITC-000043

59.1 %
22 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144