Genome / Transcriptome

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References / BioProjects 1

1 Cornejo, O.E., Muh-Ching Yee, Victor Dominguez, Mary Andrews, Alexandra Sockell, Erika Strandberg, Donald Livingstone III, Conrad Stack, Alberto Romero, Pathmanathan Umaharan, Stefan Royaert, Nilesh R. Tawari, Pauline Ng, Osman Gutierrez, Wilbert Phillips, Keithanne Mockaitis, Carlos D. Bustamante & Juan C. Motamayor (2018)
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process. Commun Biol 1, 167
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BioProject: PRJNA486011  NCBI   ENA 
Project: PRJEB28591  EVA (project)   EVA (analysis) 
Focus of study: population analysis  
Library Source: genomic  
BioSamples: 200 187 clones | Runs: 200 | Experiments: 200 | SampleSources: 15
 
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Plants 187

1 A 645 [ECU]   View

2 A 2076 [ECU]   View

3 A 2126 [ECU]   View

4 A 2367 [ECU]   View

5 A 2416 [ECU]   View

6 A 2462 [ECU]   View

7 A 2699 [ECU]   View

8 A 2748 [ECU]   View

9 AGU 3339 /12 [CHA]   View

10 AM 1 /54 [POU]   View

11 AM 2 /18 [POU]   View

12 AMAZ 11   View

13 AMAZ 12   View

14 AMAZ 14   View

15 AMAZ 15 /15   View

16 B 6 /3 [POU]   View

17 B 6 /8 [POU]   View

18 B 60 [ECU]   View

19 BE 10   View

20 BR 25   View

21 BRISAS 1   View

22 CAB 71   View

23 CAB 76   View

24 CAB 77   View

25 CATIE 1000   View

26 CATONGO   View

27 CC 71   View

28 CCN 10   View

29 CCN 51   View

30 CL 27 /50   View

31 COCA 3370 /5 [CHA]   View

32 CRIOLLO [CRI]   View

33 CRU 59   View

34 CRU 89   View

35 CRU 101   View

36 CRUZ 7 /14   View

37 CS 146   View

38 CUR 3 [CHA]   View

39 EB 1915   View

40 EB 2237   View

41 EET 58 [ECU]   View

42 EET 59 [ECU]   View

43 EET 95 [ECU]   View

44 EET 103 [ECU]   View

45 EET 233 [ECU]   View

46 EET 387 [ECU]   View

47 EET 397 [ECU]   View

48 EET 400 [ECU]   View

49 EET 446 [ECU]   View

50 EET 451 [ECU]   View

51 EET 462 [ECU]   View

52 ELP 20 A   View

53 FSC 13   View

54 GU 114 /P   View

55 GU 175 /P   View

56 GU 222   View

57 GU 255 /V   View

58 GU 291 F   View

59 GU 300 /P   View

60 GU 307   View

61 GU 308 /A   View

62 ICA 70 [COL]   View

63 ICS 1   View

64 ICS 6   View

65 ICS 39   View

66 ICS 40   View

67 ICS 43   View

68 ICS 60   View

69 ICS 61   View

70 ICS 95   View

71 IMC 12   View

72 IMC 14   View

73 IMC 20   View

74 IMC 36   View

75 IMC 47   View

76 IMC 50   View

77 IMC 51   View

78 IMC 67   View

79 INIAP T 682 A1 D147   View

80 JA 5 /5 [POU]   View

81 JA 5 /35 [POU]   View

82 JA 5 /36 [POU]   View

83 K 82 [KER]   View

84 KA 2   View

85 L11-H19 [ECU]   View

86 L18-H58 [ECU]   View

87 L46-H75 [ECU]   View

88 L46-H88 [ECU]   View

89 L49-H98 [ECU]   View

90 LCT EEN 46   View

91 LCT EEN 83 /S-8   View

92 LCT EEN 141   View

93 LCT EEN 368   View

94 LP 3 /40 [POU]   View

95 LP 4 /48 [POU]   View

96 LX 32   View

97 LX 43   View

98 M 1 [IDN]   View

99 M 2 [IDN]   View

100 M 4 [IDN]   View

101 M 5 [IDN]   View

102 M 6 [IDN]   View

103 M 7 [IDN]   View

104 M 8 [SUR]   View

105 MAN 15 /2 [BRA]   View

106 MATINA   View

107 MATINA 2   View

108 MO 4   View

109 MO 9   View

110 MO 99   View

111 MO 109   View

112 MOCORONGO   View

113 MXC 67   View

114 NA 33   View

115 NA 45   View

116 NA 92   View

117 NA 286   View

118 NA 331   View

119 NA 702   View

120 NA 712   View

121 NH 40   View

122 NH 53   View

123 OC 61 [VEN]   View

124 P 30 [POS]   View

125 PA 13 [PER]   View

126 PA 51 [PER]   View

127 PA 56 [PER]   View

128 PA 70 [PER]   View

129 PA 88 [PER]   View

130 PA 107 [PER]   View

131 PA 120 [PER]   View

132 PA 121 [PER]   View

133 PA 137 [PER]   View

134 PA 150 [PER]   View

135 PA 169 [PER]   View

136 PA 218 [PER]   View

137 PA 289 [PER]   View

138 PBC 123   View

139 PLAYA ALTA 1 [VEN]   View

140 PMF 20   View

141 PMF 27   View

142 POUND 7   View

143 POUND 7 /B   View

144 POUND 10 /B   View

145 RB 39 [BRA]   View

146 RB 40 [BRA]   View

147 RB 47 [BRA]   View

148 REDAMEL 1 /27   View

149 REDAMEL 1 /31   View

150 SC 1 [COL]   View

151 SCA 5   View

152 SCA 6   View

153 SCA 10   View

154 SCA 11   View

155 SCA 19   View

156 SCA 24   View

157 SIAL 70   View

158 SIAL 84   View

159 SIAL 169   View

160 SIC 806   View

161 SIL 1   View

162 SILECIA 8 [ECU]   View

163 SJ 2 /22 [POU]   View

164 SLC 4   View

165 SNA 707   View

166 SP 1 [VEN]   View

167 SP 3 [VEN]   View

168 SP 9 [VEN]   View

169 SPA 7 [COL]   View

170 SPEC 54 /1   View

171 SPEC 194 /75   View

172 T 85 [POS]   View

173 TAP 3 [CHA]   View

174 TAP 6 [CHA]   View

175 TAP 10 [CHA]   View

176 TIPUTINI 1 [CHA]   View

177 TRD 45   View

178 TRD 86   View

179 TSA 654   View

180 TSH 516   View

181 TSH 1188   View

182 UF 11   View

183 UF 12   View

184 UF 273   View

185 UF 668   View

186 UF 676   View

187 UNAP 2 [CHA]   View