Cornejo, O.E., Muh-Ching Yee, Victor Dominguez, Mary Andrews, Alexandra Sockell, Erika Strandberg, Donald Livingstone III, Conrad Stack, Alberto Romero, Pathmanathan Umaharan, Stefan Royaert, Nilesh R. Tawari, Pauline Ng, Osman Gutierrez, Wilbert Phillips, Keithanne Mockaitis, Carlos D. Bustamante & Juan C. Motamayor (2018) Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process. Commun Biol 1, 167
SampleName | Clone name | Data type | Run | Experiment | BioSample | SampleSource | Tree ID |
---|---|---|---|---|---|---|---|
2076 | A 2076 [ECU] | genomic | SRR7774251 NCBI ENA | SRX4629573 | SAMN09934386 | Ecuador | - |
2126 | A 2126 [ECU] | genomic | SRR7774250 NCBI ENA | SRX4629574 | SAMN09934387 | Ecuador | - |
2367 | A 2367 [ECU] | genomic | SRR7774184 NCBI ENA | SRX4629640 | SAMN09934388 | Ecuador | - |
2416 | A 2416 [ECU] | genomic | SRR7774171 NCBI ENA | SRX4629653 | SAMN09934389 | Ecuador | - |
2462 | A 2462 [ECU] | genomic | SRR7774180 NCBI ENA | SRX4629644 | SAMN09934390 | Ecuador | - |
2699 | A 2699 [ECU] | genomic | SRR7774298 NCBI ENA | SRX4629526 | SAMN09934391 | Ecuador | - |
2748 | A 2748 [ECU] | genomic | SRR7774186 NCBI ENA | SRX4629638 | SAMN09934392 | Ecuador | - |
AGU_3339_12 | AGU 3339 /12 [CHA] | genomic | SRR7774183 NCBI ENA | SRX4629641 | SAMN09934393 | Trinidad | 18276 |
AM_1_54 | AM 1 /54 [POU] | genomic | SRR7774305 NCBI ENA | SRX4629519 | SAMN09934400 | Costa Rica | - |
AM_2_18 | AM 2 /18 [POU] | genomic | SRR7774304 NCBI ENA | SRX4629520 | SAMN09934401 | Costa Rica | - |
AMAZ_12 | AMAZ 12 | genomic | SRR7774307 NCBI ENA | SRX4629517 | SAMN09934398 | Trinidad | 17443 |
AMAZ_15_15 | AMAZ 15 /15 | genomic | SRR7774306 NCBI ENA | SRX4629518 | SAMN09934399 | Trinidad | 17421 |
AMAZ-11_G18_A1 | AMAZ 11 | genomic | SRR7774243 NCBI ENA | SRX4629581 | SAMN09934394 | Ecuador | - |
AMAZ-11_G21_A10 | AMAZ 11 | genomic | SRR7774242 NCBI ENA | SRX4629582 | SAMN09934395 | Ecuador | - |
AMAZ-14_G23_A1 | AMAZ 14 | genomic | SRR7774309 NCBI ENA | SRX4629515 | SAMN09934396 | Ecuador | - |
AMAZ-14_G24_A5 | AMAZ 14 | genomic | SRR7774308 NCBI ENA | SRX4629516 | SAMN09934397 | Ecuador | - |
B_6_3 | B 6 /3 [POU] | genomic | SRR7774301 NCBI ENA | SRX4629523 | SAMN09934404 | Trinidad | Tc17477 |
B_6_8 | B 6 /8 [POU] | genomic | SRR7774300 NCBI ENA | SRX4629524 | SAMN09934405 | Trinidad | 18277 |
BE_10 | BE 10 | genomic | SRR7774303 NCBI ENA | SRX4629521 | SAMN09934402 | Costa Rica | 17422 |
BR25 | BR 25 | genomic | SRR7774302 NCBI ENA | SRX4629522 | SAMN09934403 | Indonesia (gDNA USDA) | - |
Brisas-1 | BRISAS 1 | genomic | SRR7774178 NCBI ENA | SRX4629646 | SAMN09934406 | (Ecuador) gDNA USDA | Tc02491 |
CAB_71_PL3 | CAB 71 | genomic | SRR7774179 NCBI ENA | SRX4629645 | SAMN09934407 | gDNA Miami | Tc02565 |
CAB_76_PL3 | CAB 76 | genomic | SRR7774176 NCBI ENA | SRX4629648 | SAMN09934408 | gDNA Miami | Tc02567 |
CAB_77_PL5 | CAB 77 | genomic | SRR7774177 NCBI ENA | SRX4629647 | SAMN09934409 | gDNA Miami | Tc02568 |
CATIE_1000 | CATIE 1000 | genomic | SRR7800376 NCBI ENA | SRX4629650 | SAMN09934410 | Costa Rica | 17423 |
Catongo | CATONGO | genomic | SRR7774215 NCBI ENA | SRX4629609 | SAMN09934430 | Costa Rica | 17445 |
CC_71 | CC 71 | genomic | SRR7774352 NCBI ENA | SRX4629472 | SAMN09934418 | Costa Rica | - |
CCAT1119_EET544_A1 | L11-H19 [ECU] | genomic | SRR7774175 NCBI ENA | SRX4629649 | SAMN09934411 | Ecuador | - |
CCAT1858_EET547 | L18-H58 [ECU] | genomic | SRR7774172 NCBI ENA | SRX4629652 | SAMN09934412 | Ecuador | - |
CCAT4675_EET575 | L46-H75 [ECU] | genomic | SRR7774173 NCBI ENA | SRX4629651 | SAMN09934413 | Ecuador | - |
CCAT4688_EET576_A1 | L46-H88 [ECU] | genomic | SRR7774181 NCBI ENA | SRX4629643 | SAMN09934414 | Ecuador | - |
CCAT4998_EET577 | L49-H98 [ECU] | genomic | SRR7774182 NCBI ENA | SRX4629642 | SAMN09934415 | Ecuador | - |
CCN10 | CCN 10 | genomic | SRR7774350 NCBI ENA | SRX4629474 | SAMN09934416 | Costa Rica | 17446 |
CCN51 | CCN 51 | genomic | SRR7774349 NCBI ENA | SRX4629475 | SAMN09934417 | Brazil, MARS | - |
CL_27_50 | CL 27 /50 | genomic | SRR7774351 NCBI ENA | SRX4629473 | SAMN09934419 | Trinidad | Tc17482 |
COCA_3370_5 | COCA 3370 /5 [CHA] | genomic | SRR7774346 NCBI ENA | SRX4629478 | SAMN09934420 | Costa Rica | Tc04611 |
criollo | CRIOLLO [CRI] | genomic | SRR7774278 NCBI ENA | SRX4629546 | SAMN09934580 | Costa Rica | - |
CRU_101 | CRU 101 | genomic | SRR7774348 NCBI ENA | SRX4629476 | SAMN09934422 | Trinidad | Tc17492 |
CRU_59 | CRU 59 | genomic | SRR7774347 NCBI ENA | SRX4629477 | SAMN09934423 | Trinidad | - |
CRU_89 | CRU 89 | genomic | SRR7774355 NCBI ENA | SRX4629469 | SAMN09934424 | Trinidad | Tc17488 |
CRUZ_7_14 | CRUZ 7 /14 | genomic | SRR7774345 NCBI ENA | SRX4629479 | SAMN09934421 | Costa Rica | - |
CS_146 | CS 146 | genomic | SRR7774354 NCBI ENA | SRX4629470 | SAMN09934425 | Costa Rica | 11453 |
CUR3_G35_A1 | CUR 3 [CHA] | genomic | SRR7774159 NCBI ENA | SRX4629665 | SAMN09934426 | Ecuador | - |
CUR3_G37_A6 | CUR 3 [CHA] | genomic | SRR7774157 NCBI ENA | SRX4629667 | SAMN09934427 | Ecuador | - |
CUR3_G38_A8 | CUR 3 [CHA] | genomic | SRR7774170 NCBI ENA | SRX4629654 | SAMN09934428 | Ecuador | - |
CUR3_G39_A10 | CUR 3 [CHA] | genomic | SRR7774226 NCBI ENA | SRX4629598 | SAMN09934429 | Ecuador | - |
EB-19-1S | EB 1915 | genomic | SRR7774353 NCBI ENA | SRX4629471 | SAMN09934431 | (Ecuador) gDNA USDA | - |
EB2237_A1 | EB 2237 | genomic | SRR7774156 NCBI ENA | SRX4629668 | SAMN09934432 | Ecuador | - |
EET_103 | EET 103 [ECU] | genomic | SRR7774210 NCBI ENA | SRX4629614 | SAMN09934441 | Ecuador | 17424 |
EET_395 | SILECIA 8 [ECU] | genomic | SRR7774209 NCBI ENA | SRX4629615 | SAMN09934442 | Trinidad | 18186 |
EET_400 | EET 400 [ECU] | genomic | SRR7774208 NCBI ENA | SRX4629616 | SAMN09934443 | Costa Rica | Tc17439 |
EET_58 | EET 58 [ECU] | genomic | SRR7774213 NCBI ENA | SRX4629611 | SAMN09934444 | Trinidad | Tc17727 |
EET_59 | EET 59 [ECU] | genomic | SRR7774212 NCBI ENA | SRX4629612 | SAMN09934445 | Trinidad | 18302 |
EET103_Borde | EET 103 [ECU] | genomic | SRR7774158 NCBI ENA | SRX4629666 | SAMN09934433 | Ecuador | 17424 |
EET397 | EET 397 [ECU] | genomic | SRR7774241 NCBI ENA | SRX4629583 | SAMN09934434 | Costa Rica | 17447 |
EET400_Arbol-122 | EET 400 [ECU] | genomic | SRR7774342 NCBI ENA | SRX4629482 | SAMN09934435 | Ecuador | Tc21291 |
EET446_A1 | EET 446 [ECU] | genomic | SRR7774207 NCBI ENA | SRX4629617 | SAMN09934436 | Ecuador | - |
EET451_A1 | EET 451 [ECU] | genomic | SRR7774206 NCBI ENA | SRX4629618 | SAMN09934437 | Ecuador | - |
EET462_A1 | EET 462 [ECU] | genomic | SRR7774205 NCBI ENA | SRX4629619 | SAMN09934438 | Ecuador | - |
EET58_A1 | EET 58 [ECU] | genomic | SRR7774204 NCBI ENA | SRX4629620 | SAMN09934439 | Ecuador | - |
EET95_A2 | EET 95 [ECU] | genomic | SRR7774211 NCBI ENA | SRX4629613 | SAMN09934440 | Ecuador | - |
ELP_20_A | ELP 20 A | genomic | SRR7774268 NCBI ENA | SRX4629556 | SAMN09934446 | Costa Rica | Tc02198 |
FSC_13 | FSC 13 | genomic | SRR7774269 NCBI ENA | SRX4629555 | SAMN09934447 | Costa Rica | 18315 |
GU_114_P | GU 114 /P | genomic | SRR7774267 NCBI ENA | SRX4629557 | SAMN09934449 | Trinidad | Tc17459 |
GU_175_P | GU 175 /P | genomic | SRR7774254 NCBI ENA | SRX4629570 | SAMN09934450 | Trinidad | Tc17460 |
GU_222 | GU 222 | genomic | SRR7774270 NCBI ENA | SRX4629554 | SAMN09934452 | Trinidad | - |
GU_291_F | GU 291 F | genomic | SRR7774256 NCBI ENA | SRX4629568 | SAMN09934451 | Trinidad | - |
GU_300_P | GU 300 /P | genomic | SRR7774271 NCBI ENA | SRX4629553 | SAMN09934453 | Trinidad | Tc17463 |
GU_307 | GU 307 | genomic | SRR7774227 NCBI ENA | SRX4629597 | SAMN09934454 | Costa Rica | 17426 |
GU_308A | GU 308 /A | genomic | SRR7774228 NCBI ENA | SRX4629596 | SAMN09934455 | Costa Rica | Tc02175 |
GU255_V | GU 255 /V | genomic | SRR7774266 NCBI ENA | SRX4629558 | SAMN09934448 | Costa Rica | 17425 |
ICA_70 | ICA 70 [COL] | genomic | SRR7774255 NCBI ENA | SRX4629569 | SAMN09934456 | Trinidad | 18321 |
ICS_1 | ICS 1 | genomic | SRR7774310 NCBI ENA | SRX4629514 | SAMN09934459 | leaf from Miami | - |
ICS_43 | ICS 43 | genomic | SRR7774313 NCBI ENA | SRX4629511 | SAMN09934460 | Trinidad | 18331 |
ICS_6 | ICS 6 | genomic | SRR7774312 NCBI ENA | SRX4629512 | SAMN09934461 | Trinidad | Tc00551 |
ICS_60 | ICS 60 | genomic | SRR7774315 NCBI ENA | SRX4629509 | SAMN09934462 | Trinidad | Tc18242 |
ICS_61 | ICS 61 | genomic | SRR7774314 NCBI ENA | SRX4629510 | SAMN09934463 | Trinidad | - |
ICS_95 | ICS 95 | genomic | SRR7774230 NCBI ENA | SRX4629594 | SAMN09934464 | gDNA Miami | Tc16546 |
ICS39 | ICS 39 | genomic | SRR7774299 NCBI ENA | SRX4629525 | SAMN09934457 | Costa Rica | 17448 |
ICS40 | ICS 40 | genomic | SRR7774311 NCBI ENA | SRX4629513 | SAMN09934458 | Costa Rica | 17449 |
IMC_12 | IMC 12 | genomic | SRR7774328 NCBI ENA | SRX4629496 | SAMN09934466 | Trinidad | 18339 |
IMC_14 | IMC 14 | genomic | SRR7774329 NCBI ENA | SRX4629495 | SAMN09934467 | Trinidad | 17733 |
IMC_20 | IMC 20 | genomic | SRR7774330 NCBI ENA | SRX4629494 | SAMN09934468 | Trinidad | Tc00707 |
IMC_36 | IMC 36 | genomic | SRR7774257 NCBI ENA | SRX4629567 | SAMN09934469 | Trinidad | Tc00709 |
IMC_47 | IMC 47 | genomic | SRR7774274 NCBI ENA | SRX4629550 | SAMN09934470 | Costa Rica | Tc16547 |
IMC_50 | IMC 50 | genomic | SRR7774285 NCBI ENA | SRX4629539 | SAMN09934471 | Trinidad | Tc00560 |
IMC_51 | IMC 51 | genomic | SRR7774343 NCBI ENA | SRX4629481 | SAMN09934472 | Trinidad | Tc00753 |
IMC67 | IMC 67 | genomic | SRR7774229 NCBI ENA | SRX4629595 | SAMN09934465 | Trinidad | Tc17736 |
JA_5_35 | JA 5 /35 [POU] | genomic | SRR7774344 NCBI ENA | SRX4629480 | SAMN09934473 | Trinidad | - |
JA_5_36 | JA 5 /36 [POU] | genomic | SRR7774327 NCBI ENA | SRX4629497 | SAMN09934474 | Trinidad | - |
JA_5_5 | JA 5 /5 [POU] | genomic | SRR7774331 NCBI ENA | SRX4629493 | SAMN09934475 | Trinidad | - |
K82 | K 82 [KER] | genomic | SRR7774203 NCBI ENA | SRX4629621 | SAMN09934476 | Papua New Guinea | - |
KA2 | KA 2 | genomic | SRR7774202 NCBI ENA | SRX4629622 | SAMN09934477 | Papua New Guinea | - |
LCT_EEN_46 | LCT EEN 46 | genomic | SRR7774192 NCBI ENA | SRX4629632 | SAMN09934480 | Trinidad | Tc01431 |
LCT_EEN_83_S-8 | LCT EEN 83 /S-8 | genomic | SRR7774297 NCBI ENA | SRX4629527 | SAMN09934481 | Trinidad | - |
LCT46_A1 | LCT EEN 46 | genomic | SRR7774201 NCBI ENA | SRX4629623 | SAMN09934478 | Ecuador | - |
LCTEEN_141 | LCT EEN 141 | genomic | SRR7774326 NCBI ENA | SRX4629498 | SAMN09934479 | gDNA Miami | Tc01453 |
LP_3_40 | LP 3 /40 [POU] | genomic | SRR7774187 NCBI ENA | SRX4629637 | SAMN09934482 | Trinidad | 18348 |
LP_4_48 | LP 4 /48 [POU] | genomic | SRR7774185 NCBI ENA | SRX4629639 | SAMN09934483 | Trinidad | - |
LX_32 | LX 32 | genomic | SRR7774214 NCBI ENA | SRX4629610 | SAMN09934484 | Costa Rica | - |
LX_43 | LX 43 | genomic | SRR7774296 NCBI ENA | SRX4629528 | SAMN09934485 | Costa Rica | - |
M_8 | M 8 [SUR] | genomic | SRR7774292 NCBI ENA | SRX4629532 | SAMN09934499 | Trinidad | - |
M01 | M 1 [IDN] | genomic | SRR7774264 NCBI ENA | SRX4629560 | SAMN09934486 | Indonesia (gDNA USDA) | - |
M02 | M 2 [IDN] | genomic | SRR7774265 NCBI ENA | SRX4629559 | SAMN09934487 | Indonesia (gDNA USDA) | - |
M04 | M 4 [IDN] | genomic | SRR7774262 NCBI ENA | SRX4629562 | SAMN09934488 | Indonesia (gDNA USDA) | - |
M05 | M 5 [IDN] | genomic | SRR7774263 NCBI ENA | SRX4629561 | SAMN09934489 | Indonesia (gDNA USDA) | - |
M06 | M 6 [IDN] | genomic | SRR7774260 NCBI ENA | SRX4629564 | SAMN09934490 | Indonesia (gDNA USDA) | - |
M07 | M 7 [IDN] | genomic | SRR7774261 NCBI ENA | SRX4629563 | SAMN09934491 | Indonesia (gDNA USDA) | - |
MAN_15_2 | MAN 15 /2 [BRA] | genomic | SRR7774258 NCBI ENA | SRX4629566 | SAMN09934492 | Costa Rica | 17428 |
Matina | MATINA | genomic | SRR7774287 NCBI ENA | SRX4629537 | SAMN09934500 | Costa Rica | - |
MATINA_Tica2 | MATINA 2 | genomic | SRR7774259 NCBI ENA | SRX4629565 | SAMN09934493 | Ecuador | - |
MO_109 | MO 109 | genomic | SRR7774272 NCBI ENA | SRX4629552 | SAMN09934494 | Trinidad | Tc18213 |
MO_4 | MO 4 | genomic | SRR7774273 NCBI ENA | SRX4629551 | SAMN09934495 | Trinidad | 18362 |
MO_9 | MO 9 | genomic | SRR7774291 NCBI ENA | SRX4629533 | SAMN09934496 | Trinidad | 18370 |
MO_99 | MO 99 | genomic | SRR7774290 NCBI ENA | SRX4629534 | SAMN09934497 | Trinidad | Tc17508 |
Mocorongo | MOCORONGO | genomic | SRR7774286 NCBI ENA | SRX4629538 | SAMN09934501 | Costa Rica | 17429 |
mvP30 | P 30 [POS] | genomic | SRR7774277 NCBI ENA | SRX4629547 | SAMN09934581 | - | - |
mvT85 | T 85 [POS] | genomic | SRR7774280 NCBI ENA | SRX4629544 | SAMN09934582 | Indonesia | - |
MXC_67 | MXC 67 | genomic | SRR7774293 NCBI ENA | SRX4629531 | SAMN09934498 | Trinidad | 18391 |
NA_286 | NA 286 | genomic | SRR7774295 NCBI ENA | SRX4629529 | SAMN09934504 | Trinidad | 18395 |
NA_33_T2 | NA 33 | genomic | SRR7774222 NCBI ENA | SRX4629602 | SAMN09934506 | Trinidad | Tc00797 |
NA_331 | NA 331 | genomic | SRR7774294 NCBI ENA | SRX4629530 | SAMN09934505 | Trinidad | Tc00923 |
NA_712 | NA 712 | genomic | SRR7774223 NCBI ENA | SRX4629601 | SAMN09934507 | Trinidad | Tc0629 |
NA_92 | NA 92 | genomic | SRR7774224 NCBI ENA | SRX4629600 | SAMN09934508 | Trinidad | Tc00657 |
NA45 | NA 45 | genomic | SRR7774289 NCBI ENA | SRX4629535 | SAMN09934502 | Costa Rica | Tc00602 |
NA702 | NA 702 | genomic | SRR7774288 NCBI ENA | SRX4629536 | SAMN09934503 | Trinidad | TC0930 |
NH_40 | NH 40 | genomic | SRR7774225 NCBI ENA | SRX4629599 | SAMN09934509 | Bolivia, gDNA from Miami | 6451 |
NH_53 | NH 53 | genomic | SRR7774218 NCBI ENA | SRX4629606 | SAMN09934510 | Bolivia, gDNA from Miami | 6464 |
OC_61 | OC 61 [VEN] | genomic | SRR7774219 NCBI ENA | SRX4629605 | SAMN09934511 | Trinidad | Tc17475 |
PA_107 | PA 107 [PER] | genomic | SRR7774216 NCBI ENA | SRX4629608 | SAMN09934514 | Trinidad | 18407 |
PA_120 | PA 120 [PER] | genomic | SRR7774217 NCBI ENA | SRX4629607 | SAMN09934515 | Trinidad | Tc18221 |
PA_121 | PA 121 [PER] | genomic | SRR7774236 NCBI ENA | SRX4629588 | SAMN09934516 | Costa Rica, gDNA from Miami | Tc00955 |
PA_13 | PA 13 [PER] | genomic | SRR7774235 NCBI ENA | SRX4629589 | SAMN09934517 | gDNA Miami | Tc18218 |
PA_137 | PA 137 [PER] | genomic | SRR7774234 NCBI ENA | SRX4629590 | SAMN09934518 | Trinidad | Tc15958 |
PA_150 | PA 150 [PER] | genomic | SRR7774233 NCBI ENA | SRX4629591 | SAMN09934519 | Trinidad | TC00501 |
PA_169 | PA 169 [PER] | genomic | SRR7774240 NCBI ENA | SRX4629584 | SAMN09934520 | Trinidad | Tc15974 |
PA_218 | PA 218 [PER] | genomic | SRR7774239 NCBI ENA | SRX4629585 | SAMN09934521 | Trinidad | 18192 |
PA_51 | PA 51 [PER] | genomic | SRR7774238 NCBI ENA | SRX4629586 | SAMN09934522 | Miami | Tc00686 |
PA_56 | PA 56 [PER] | genomic | SRR7774237 NCBI ENA | SRX4629587 | SAMN09934523 | Trinidad | 18396 |
PA_70 | PA 70 [PER] | genomic | SRR7774232 NCBI ENA | SRX4629592 | SAMN09934524 | gDNA Miami | Tc15954 |
PA_88 | PA 88 [PER] | genomic | SRR7774231 NCBI ENA | SRX4629593 | SAMN09934525 | gDNA Miami | TC00983 |
PA107_A1 | PA 107 [PER] | genomic | SRR7774220 NCBI ENA | SRX4629604 | SAMN09934512 | Trinidad | - |
PA289 | PA 289 [PER] | genomic | SRR7774221 NCBI ENA | SRX4629603 | SAMN09934513 | Trinidad | Tc00511 |
PBC123 | PBC 123 | genomic | SRR7774164 NCBI ENA | SRX4629660 | SAMN09934526 | Indonesia (gDNA USDA) | - |
PlayaAlta1 | PLAYA ALTA 1 [VEN] | genomic | SRR7774169 NCBI ENA | SRX4629655 | SAMN09934531 | Trinidad | Tc16545 |
PMF_20 | PMF 20 | genomic | SRR7774165 NCBI ENA | SRX4629659 | SAMN09934527 | gDNA Miami | Tc11280 |
PMF_27 | PMF 27 | genomic | SRR7774162 NCBI ENA | SRX4629662 | SAMN09934528 | gDNA Miami | 11287 |
POUND_10_B | POUND 10 /B | genomic | SRR7774163 NCBI ENA | SRX4629661 | SAMN09934529 | Trinidad | Tc00858 |
Pound_7 | POUND 7 | genomic | SRR7774166 NCBI ENA | SRX4629658 | SAMN09934532 | Costa Rica | - |
POUND_7_B | POUND 7 /B | genomic | SRR7774168 NCBI ENA | SRX4629656 | SAMN09934530 | Trinidad | 18419 |
RB_40 | RB 40 [BRA] | genomic | SRR7774160 NCBI ENA | SRX4629664 | SAMN09934534 | Costa Rica | Tc00449 |
RB_47_PL3 | RB 47 [BRA] | genomic | SRR7774161 NCBI ENA | SRX4629663 | SAMN09934535 | Costa Rica | Tc02518 |
RB39PL1 | RB 39 [BRA] | genomic | SRR7774167 NCBI ENA | SRX4629657 | SAMN09934533 | Costa Rica | Tc02522 |
REDAMEL_1_27 | REDAMEL 1 /27 | genomic | SRR7774194 NCBI ENA | SRX4629630 | SAMN09934536 | Trinidad | 18180 |
REDAMEL_1_31 | REDAMEL 1 /31 | genomic | SRR7774193 NCBI ENA | SRX4629631 | SAMN09934537 | Trinidad | - |
SC_1 | SC 1 [COL] | genomic | SRR7774190 NCBI ENA | SRX4629634 | SAMN09934544 | Costa Rica | - |
SCA_10 | SCA 10 | genomic | SRR7774195 NCBI ENA | SRX4629629 | SAMN09934539 | Trinidad | Tc00984 |
SCA_11 | SCA 11 | genomic | SRR7774198 NCBI ENA | SRX4629626 | SAMN09934540 | Trinidad | Tc00882 |
SCA_19 | SCA 19 | genomic | SRR7774197 NCBI ENA | SRX4629627 | SAMN09934541 | Costa Rica | Tc00522 |
SCA_24.2 | SCA 24 | genomic | SRR7774200 NCBI ENA | SRX4629624 | SAMN09934542 | Costa Rica | Tc00523 |
SCA_5 | SCA 5 | genomic | SRR7774199 NCBI ENA | SRX4629625 | SAMN09934543 | gDNA Miami | Tc00884 |
SCA6** | SCA 6 | genomic | SRR7774196 NCBI ENA | SRX4629628 | SAMN09934538 | gDNA Miami | Tc16548 |
SIAL169 | SIAL 169 | genomic | SRR7774189 NCBI ENA | SRX4629635 | SAMN09934545 | Costa Rica | Tc00179 |
SIAL70 | SIAL 70 | genomic | SRR7774316 NCBI ENA | SRX4629508 | SAMN09934546 | Costa Rica | Tc00185 |
SIAL84 | SIAL 84 | genomic | SRR7774317 NCBI ENA | SRX4629507 | SAMN09934547 | Costa Rica | Tc00186 |
SIC806 | SIC 806 | genomic | SRR7774318 NCBI ENA | SRX4629506 | SAMN09934548 | Costa Rica | Tc00200 |
SIL-1_G56_A6 | SIL 1 | genomic | SRR7774319 NCBI ENA | SRX4629505 | SAMN09934549 | Costa Rica | - |
SJ_2_22 | SJ 2 /22 [POU] | genomic | SRR7774320 NCBI ENA | SRX4629504 | SAMN09934550 | Trinidad | 18442 |
SLC_4 | SLC 4 | genomic | SRR7774321 NCBI ENA | SRX4629503 | SAMN09934551 | Trinidad | Tc17513 |
SNA0707 | SNA 707 | genomic | SRR7774322 NCBI ENA | SRX4629502 | SAMN09934552 | Costa Rica | - |
sp1 | SP 1 [VEN] | genomic | SRR7774279 NCBI ENA | SRX4629545 | SAMN09934583 | Venezuela (gDNA USDA) | - |
sp3 | SP 3 [VEN] | genomic | SRR7774276 NCBI ENA | SRX4629548 | SAMN09934584 | Venezuela (gDNA USDA) | - |
sp9 | SP 9 [VEN] | genomic | SRR7774275 NCBI ENA | SRX4629549 | SAMN09934585 | Venezuela (gDNA USDA) | - |
SPA_7 | SPA 7 [COL] | genomic | SRR7774323 NCBI ENA | SRX4629501 | SAMN09934553 | Costa Rica | - |
SPEC_194_75 | SPEC 194 /75 | genomic | SRR7774324 NCBI ENA | SRX4629500 | SAMN09934554 | Trinidad | Tc18235 |
SPEC_54_1 | SPEC 54 /1 | genomic | SRR7774325 NCBI ENA | SRX4629499 | SAMN09934555 | Costa Rica | Tc05194 |
T675_A645_A1 | A 645 [ECU] | genomic | SRR7774341 NCBI ENA | SRX4629483 | SAMN09934556 | Ecuador | - |
T678_B60_A1 | B 60 [ECU] | genomic | SRR7774340 NCBI ENA | SRX4629484 | SAMN09934557 | Ecuador | - |
T680_A1 | CCN 51 | genomic | SRR7774339 NCBI ENA | SRX4629485 | SAMN09934558 | Ecuador | - |
T682_A1_D147 | INIAP T 682 A1 D147 | genomic | SRR7774338 NCBI ENA | SRX4629486 | SAMN09934559 | Ecuador | - |
T684_EET233_A1 | EET 233 [ECU] | genomic | SRR7774337 NCBI ENA | SRX4629487 | SAMN09934560 | Ecuador | - |
T685_EET387_A1 | EET 387 [ECU] | genomic | SRR7774336 NCBI ENA | SRX4629488 | SAMN09934561 | Ecuador | - |
T686_LCT-368_A1 | LCT EEN 368 | genomic | SRR7774335 NCBI ENA | SRX4629489 | SAMN09934562 | Ecuador | - |
T695_SCA-6_A1 | SCA 6 | genomic | SRR7774334 NCBI ENA | SRX4629490 | SAMN09934563 | Ecuador | - |
TAP10_G12_A1 | TAP 10 [CHA] | genomic | SRR7774333 NCBI ENA | SRX4629491 | SAMN09934564 | Ecuador | - |
TAP3_G70_A2 | TAP 3 [CHA] | genomic | SRR7774332 NCBI ENA | SRX4629492 | SAMN09934565 | Ecuador | - |
TAP6_G12_A1 | TAP 6 [CHA] | genomic | SRR7774252 NCBI ENA | SRX4629572 | SAMN09934566 | Ecuador | - |
TIP-1_G41_A1 | TIPUTINI 1 [CHA] | genomic | SRR7774253 NCBI ENA | SRX4629571 | SAMN09934567 | Ecuador | - |
TRD_45 | TRD 45 | genomic | SRR7774191 NCBI ENA | SRX4629633 | SAMN09934569 | Trinidad | 18443 |
TRD86 | TRD 86 | genomic | SRR7774188 NCBI ENA | SRX4629636 | SAMN09934568 | Trinidad | - |
TSA654Zymo | TSA 654 | genomic | SRR7774248 NCBI ENA | SRX4629576 | SAMN09934570 | Costa Rica | 17457 |
TSH1188 | TSH 1188 | genomic | SRR7774249 NCBI ENA | SRX4629575 | SAMN09934571 | Brazil, MARS | - |
TSH516 | TSH 516 | genomic | SRR7774246 NCBI ENA | SRX4629578 | SAMN09934572 | Costa Rica | 17455 |
UF_11 | UF 11 | genomic | SRR7774282 NCBI ENA | SRX4629542 | SAMN09934576 | Costa Rica | 18446 |
UF_668 | UF 668 | genomic | SRR7774281 NCBI ENA | SRX4629543 | SAMN09934577 | Costa Rica | 17456 |
UF_676 | UF 676 | genomic | SRR7774284 NCBI ENA | SRX4629540 | SAMN09934578 | Costa Rica | Tc13037 |
UF12 | UF 12 | genomic | SRR7774247 NCBI ENA | SRX4629577 | SAMN09934573 | Costa Rica | 17434 |
UF273_T1 | UF 273 | genomic | SRR7774244 NCBI ENA | SRX4629580 | SAMN09934574 | Costa Rica | - |
UF273_T2 | UF 273 | genomic | SRR7774245 NCBI ENA | SRX4629579 | SAMN09934575 | Costa Rica | - |
UNAP2_G78_A2 | UNAP 2 [CHA] | genomic | SRR7774283 NCBI ENA | SRX4629541 | SAMN09934579 | Ecuador | - |