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IMC 31    Theobroma cacao

 Pound, F.J. (1938)
Cacao and Witchbroom Disease of South America with notes on other species of Theobroma. Archives of Cocoa Research 1: pp. 26-71.

Derivation: Iquitos Mixed Calabacillo (Mid Channel).
Collected by Pound.
Location: Iquitos, Peru.

Pound, 1938a [POU38A]. Main type - very large lagarta calabacillo pods, oval, very smooth, normal blanco. Seeds large, flat, losenge shaped. 'Hybrid group'-large pods, somewhat warty at stem end but smooth and round like calabacillo at the apex. Third group-small, oval, warty pods, dense flowering. Bartley, 1995a [BAR95A]. The common features of this group of clones are the high ovule numbers (65+) and a specific type of anthocyanin pigmentation in the stamens and base of the corolla. Posnette, 1945a [POS45A]. Petioles are of a type intermediate between those of Nanay (see NA) and Parinari (see PA) types; the constriction is usually short and narrow.

Notes:  Pound, 1938a [POU38A]. Pods probably collected from at least two groups of trees which were free of Witches' Broom.

Bartley, 1995a [BAR95A]. They are probably the progenies of two trees, later propagated as the clones P 18 [POU] and P 21 [POU].

Pound, 1943b [POU43B]. 112 plants were planted at Marper farm.

Bartley, 1997a, [BAR97A] The progeny of the individual clones is not documented and it is important not to consider the IMC clones as one homogeneous group.
 

 POPULATION

 Guiltinan, Mark, 2019
'Iquitos' Population
 Reference

 GENOME/TRANSCRIPTOME DATA LINKS

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 Guiltinan, Mark, 2019
 Reference
BioProject: PRJNA558793   NCBI   ENA FASTQ 
Library Source: Genomic & Transcriptomic
 
Run: SRR14022540   NCBI   ENA FASTQ 
Library Source: Genomic
Experiment: SRX10399135
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022
Run: SRR14022541   NCBI   ENA FASTQ 
Library Source: Genomic
Experiment: SRX10399134
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022
Run: SRR9938271   NCBI   ENA FASTQ 
Library Source: Genomic
Experiment: SRX6686852
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022
Run: SRR9938332   NCBI   ENA FASTQ 
Library Source: Genomic
Experiment: SRX6686791
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022
Run: SRR9938333   NCBI   ENA FASTQ 
Library Source: Genomic
Experiment: SRX6686790
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022
Run: SRR9938233   NCBI   ENA FASTQ 
Library Source: Transcriptomic
Experiment: SRX6686890
BioSample: SAMN12500394
SampleName: IMC-31
SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000022

 DISEASE

 Phytophthora
Susceptible
 Guiltinan, Mark, 2019

Pound, F.J. (1938) Cacao and Witchbroom Disease of South America with notes on other species of Theobroma. Archives of Cocoa Research 1: pp. 26-71.
Guiltinan, Mark (2019) Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI