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EBC 5 Group Name Theobroma cacao

Colombia - ICA Palmira (1989)
? A catalogue of the cacao germplasm at ICA Palmira. F. Ocampo Rojas, ICA Palmira, Colombia.

Derivation: Expedicion Botanico Caqueta.
Location: Colombia.

Notes: Bartley, 1998a [BAR98A]. Seedling progenies are identifed by the suffix /s2, /s3. The numbers in the suffix of the seedling material relates to the genebank/quarantine station where the seedling material was originally sent as follows:

s1,s2... in San Carlos genebank, Ecuador,

s101,s102... at Kew (and moved to Trinidad),

s201,s202... at USDA Miami quarantine station,

s301,s302... at Barbados quarantine station.

Jaime A Osorio-Guarín, Jhon A Berdugo-Cely, Roberto A Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng (2020)
Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.). G3 Genes|Genomes|Genetics, Volume 10, Issue 5, Pages 1713–1725

Derivation: Botanical Expedition of Caqueta.
Location: Colombia.

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COLLECTION DETAILS

Location: R. Caqueta, Amazonas, Colombia (primary forest)

Date: 23 May 1984

Coordinates: 72.10 W, 0.33 S

Material collected: Pod

Altitude: 100 m

Notes: Isla Clemencia

Expedition Code: 85CO

Allen, J.B., 1987

PEDIGREE DETAILS

Mother to:: EBC 5 /S-1; EBC 5 /S-10; EBC 5 /S-2; EBC 5 /S-3; EBC 5 /S-4; EBC 5 /S-5; EBC 5 /S-6; EBC 5 /S-7; EBC 5 /S-8; EBC 5 /S-9; EBC 5 /S-302 Bartley, B.G.D., 1998

Reference

Bartley, B.G.D. 1998
Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Notes

Cameroon - IRAD Datafile: PROGENY_; EBC 5 /S-303 Bartley, B.G.D., 1998

Reference

Bartley, B.G.D. 1998
Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Notes

Cameroon - IRAD Datafile: PROGENY_; EBC 5 /S-304 Bartley, B.G.D., 1998

Reference

Bartley, B.G.D. 1998
Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Notes

Cameroon - IRAD Datafile: PROGENY_; EBC 5 /S-306 Bartley, B.G.D., 1998

Reference

Bartley, B.G.D. 1998
Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Notes

Cameroon - IRAD Datafile: PROGENY_; EBC 5 /S-401 Bartley, B.G.D., 1998

Reference

Bartley, B.G.D. 1998
Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Notes

Cameroon - IRAD Datafile: PROGENY_

GENOME/TRANSCRIPTOME DATA LINKS

Xavier Argout et al., 2023

Reference

BioProject: PRJNA880462 NCBI ENA FASTQ

Library Source: Genomic

Run: SRR21562175 NCBI ENA FASTQ

Experiment: SRX17564404

BioSample: SAMN30841408

SampleName: EBC_5

HELD IN

Ecuador, Estation Experimental Tropical Pichilingue: List received in 2012 Reference

Reference

EET - Pichilingue 2012
Accessions planted in EET - Pichilingue, Ecuador. Freddy Amores and Ignacio Sotomayor C, personal communication, February 2012.; • Local Name: EBC-5

BEAN

Allen, J.B., 1987: Colour Dark Purple: Absent; Colour Light Purple: Present; Colour White: Absent; Number: 29.0; Length: 19.9 mm; Width: 9.0 mm; Thickness: 7.6 mm; Cotyledon Wet Weight: 0.71 g; Note: expedition data; Reference

Reference

Allen, J.B. 1987
London Cocoa Trade Amazon Project. Final Report Phase 2. Cocoa Growers' Bulletin (Cadbury Schweppes plc, Birmingham, U.K.) 39: pp. 1-94.
Notes

Colombia, Ecuador - Amazon region Datafile: LCT___DC ECU - LCTAP Fruit and seed characteristics LCT2__DS LCTAP Habit and flower characteristics LCT___DS ECU - LCTAP Field and genebank data Germplasm: Details of 234 LCT-EEN and EBC accessions from material collected in the Amazon region of Ecuador and R. Caqueta, Colombia and several of Pound's collections held at the San Carlos genebank. Environment: Accessions were either described at the time of collection or after planting in the field genebank at the San Carlos site of the INIAP Napo-Payamino Experimental Station in Napo Province. In the field genebank, a maximum of 10 seedlings for each collection were planted in a single row and budwood collections were planted as a row of up to 5 plants. Trees were spaced at 3m within the row and 4m between rows. Meteorological data are given in the table as mean daily maximum and mean daily minimum temperature and mean total rainfall per month. Soil analyses were carried out in the Department of Forestry and Natural Resources, Edinburgh University, UK. The table shows the means of duplicate analyses of five samples taken from the genebank site and the forest surrounding the genebank. Soil data: pH 4.2 Org. Mat. (%) 9.4 N (Total, %) 0.3 P (Total, µg/g) 702 Ca (meq/100g) 5.19 Mg (meq/100g) 1.60 K (meq/100g) 0.48 Ca/Mg (ratio) 3.24 Ca+Mg/K (ratio) 14.1 Meteorological data: Temperature (°C) Rainfall (mm) Daily Max. Daily Min. January 30.9 21.2 116.2 February 29.1 20.6 272.3 March 29.8 21.2 260.0 April 29.9 21.3 327.5 May 29.9 21.0 287.9 June 27.9 20.4 308.1 July 28.1 20.0 254.1 August 29.3 20.3 262.5 September 30.3 20.5 282.4 October 30.6 21.1 257.1 November 30.8 21.1 361.2 December 31.0 21.4 154.8 Descriptors: The coding of the descriptors, and the methodology of recording, is based on the IBPGR standardised format, Engels et al., 1980 [ENG80A] and Engels, 1981 [ENG81A]. However, pod and bean data were recorded from a sample of 1-5 pods per collection, rather than the recommended sample of 10-20 pods due to limited availability of pods.

Bean Fruit

FRUIT

Allen, J.B., 1987: Basal Constriction: slight; Apex Form: slightly acute; Rugosity: smooth; Husk Thickness: 7 mm; Length: 122.0 mm; Breadth: 60.0 mm; Colour: anthocyanin absent; Weight: 165.0 g; Length Breadth Ratio: 2.03; Note: expedition data; Reference

Reference

Allen, J.B. 1987
London Cocoa Trade Amazon Project. Final Report Phase 2. Cocoa Growers' Bulletin (Cadbury Schweppes plc, Birmingham, U.K.) 39: pp. 1-94.
Notes

Colombia, Ecuador - Amazon region Datafile: LCT___DC ECU - LCTAP Fruit and seed characteristics LCT2__DS LCTAP Habit and flower characteristics LCT___DS ECU - LCTAP Field and genebank data Germplasm: Details of 234 LCT-EEN and EBC accessions from material collected in the Amazon region of Ecuador and R. Caqueta, Colombia and several of Pound's collections held at the San Carlos genebank. Environment: Accessions were either described at the time of collection or after planting in the field genebank at the San Carlos site of the INIAP Napo-Payamino Experimental Station in Napo Province. In the field genebank, a maximum of 10 seedlings for each collection were planted in a single row and budwood collections were planted as a row of up to 5 plants. Trees were spaced at 3m within the row and 4m between rows. Meteorological data are given in the table as mean daily maximum and mean daily minimum temperature and mean total rainfall per month. Soil analyses were carried out in the Department of Forestry and Natural Resources, Edinburgh University, UK. The table shows the means of duplicate analyses of five samples taken from the genebank site and the forest surrounding the genebank. Soil data: pH 4.2 Org. Mat. (%) 9.4 N (Total, %) 0.3 P (Total, µg/g) 702 Ca (meq/100g) 5.19 Mg (meq/100g) 1.60 K (meq/100g) 0.48 Ca/Mg (ratio) 3.24 Ca+Mg/K (ratio) 14.1 Meteorological data: Temperature (°C) Rainfall (mm) Daily Max. Daily Min. January 30.9 21.2 116.2 February 29.1 20.6 272.3 March 29.8 21.2 260.0 April 29.9 21.3 327.5 May 29.9 21.0 287.9 June 27.9 20.4 308.1 July 28.1 20.0 254.1 August 29.3 20.3 262.5 September 30.3 20.5 282.4 October 30.6 21.1 257.1 November 30.8 21.1 361.2 December 31.0 21.4 154.8 Descriptors: The coding of the descriptors, and the methodology of recording, is based on the IBPGR standardised format, Engels et al., 1980 [ENG80A] and Engels, 1981 [ENG81A]. However, pod and bean data were recorded from a sample of 1-5 pods per collection, rather than the recommended sample of 10-20 pods due to limited availability of pods.

Bean Fruit

FLUSH

Allen, J.B., 1988: Colour: intermediate anthocyanin; Reference

Reference

Allen, J.B. 1988
Geographical variation and population biology in wild Theobroma cacao. PhD. Thesis, University of Edinburgh, U.K. pp. 197.
Notes

Colombia, Ecuador - Amazon region Datafile: LCT___DC ECU - LCTAP Fruit and seed characteristics LCT2__DS LCTAP Habit and flower characteristics LCT___DS ECU - LCTAP Field and genebank data Germplasm: Details of 234 LCT-EEN and EBC accessions from material collected in the Amazon region of Ecuador and R. Caqueta, Colombia and several of Pound's collections held at the San Carlos genebank. Environment: Accessions were either described at the time of collection or after planting in the field genebank at the San Carlos site of the INIAP Napo-Payamino Experimental Station in Napo Province. In the field genebank, a maximum of 10 seedlings for each collection were planted in a single row and budwood collections were planted as a row of up to 5 plants. Trees were spaced at 3m within the row and 4m between rows. Meteorological data are given in the table as mean daily maximum and mean daily minimum temperature and mean total rainfall per month. Soil analyses were carried out in the Department of Forestry and Natural Resources, Edinburgh University, UK. The table shows the means of duplicate analyses of five samples taken from the genebank site and the forest surrounding the genebank. Soil data: pH 4.2 Org. Mat. (%) 9.4 N (Total, %) 0.3 P (Total, µg/g) 702 Ca (meq/100g) 5.19 Mg (meq/100g) 1.60 K (meq/100g) 0.48 Ca/Mg (ratio) 3.24 Ca+Mg/K (ratio) 14.1 Meteorological data: Temperature (°C) Rainfall (mm) Daily Max. Daily Min. January 30.9 21.2 116.2 February 29.1 20.6 272.3 March 29.8 21.2 260.0 April 29.9 21.3 327.5 May 29.9 21.0 287.9 June 27.9 20.4 308.1 July 28.1 20.0 254.1 August 29.3 20.3 262.5 September 30.3 20.5 282.4 October 30.6 21.1 257.1 November 30.8 21.1 361.2 December 31.0 21.4 154.8 Descriptors: The coding of the descriptors, and the methodology of recording, is based on the IBPGR standardised format, Engels et al., 1980 [ENG80A] and Engels, 1981 [ENG81A]. However, pod and bean data were recorded from a sample of 1-5 pods per collection, rather than the recommended sample of 10-20 pods due to limited availability of pods.

Flush Flower

REFERENCES

Colombia - ICA Palmira (1989) ? A catalogue of the cacao germplasm at ICA Palmira. F. Ocampo Rojas, ICA Palmira, Colombia.

Jaime A Osorio-Guarín, Jhon A Berdugo-Cely, Roberto A Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng (2020) Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.). G3 Genes|Genomes|Genetics, Volume 10, Issue 5, Pages 1713–1725

Allen, J.B. (1987) London Cocoa Trade Amazon Project. Final Report Phase 2. Cocoa Growers' Bulletin (Cadbury Schweppes plc, Birmingham, U.K.) 39: pp. 1-94.

Bartley, B.G.D. (1998) Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.

Xavier Argout, Gaetan Droc, Olivier Fouet, Mathieu Rouard, Karine Labadie, Bénédicte Rhoné, Gaston Rey Loor & Claire Lanaud (2023) Pangenomic exploration of Theobroma cacao: New Insights into Gene Content Diversity and Selection During Domestication. bioRxiv preprint

EET - Pichilingue (2012) Accessions planted in EET - Pichilingue, Ecuador. Freddy Amores and Ignacio Sotomayor C, personal communication, February 2012.

Allen, J.B. (1988) Geographical variation and population biology in wild Theobroma cacao. PhD. Thesis, University of Edinburgh, U.K. pp. 197.

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POD EBC 5 Group Name Theobroma cacao

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EBC 5 Group Name Theobroma cacao