SNP Profiles of POUND 7B View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
1._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
2._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
3._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
4._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
5._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
6._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
7._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
8._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
9._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
10._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
11._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
12._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
13._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
14._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
15._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
16._POUND_7_/B___	CC	AA	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
17._POUND_7_/B___	__	AA	CC	TT	__	__	__	TT	__	__	__	__	CT	AG
18._POUND_7_/B___	__	__	CC	__	__	__	__	TT	__	CC	__	GG	__	AG
19._POUND_7_/B___	__	__	CC	__	__	__	__	TT	__	CC	__	GG	__	AG
20._POUND_7_/B___	CC	AG	CC	TT	TT	AA	TT	TT	CC	CC	AA	GG	CT	AG
21._POUND_7_/B___	GG	AA	GG	AA	AA	AA	AA	AA	__	__	AA	GG	AG	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
1._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
2._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
3._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
4._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
5._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
6._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
7._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
8._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
9._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
10._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
11._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
12._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
13._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
14._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
15._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
16._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
17._POUND_7_/B___	__	__	__	__	__	CC	GG	__	CT	AA	GG	GT	CT	CC
18._POUND_7_/B___	__	__	__	__	__	CC	GG	AA	__	AA	GG	__	__	__
19._POUND_7_/B___	__	__	__	__	__	CC	GG	AA	__	AA	GG	__	__	__
20._POUND_7_/B___	CT	AA	GG	CT	CT	CC	GG	AA	CT	AA	GG	GT	CT	CC
21._POUND_7_/B___	AG	AA	GG	AG	AG	GG	CC	__	AG	AA	GG	AC	__	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
1._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
2._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
3._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
4._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
5._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
6._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
7._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
8._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
9._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
10._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
11._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
12._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
13._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
14._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
15._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
16._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
17._POUND_7_/B___	AA	__	AA	CT	AA	CC	AA	CT	GG	AC	__	__	X_X	X_X
18._POUND_7_/B___	__	__	__	__	AA	__	__	__	__	AC	__	__	X_X	X_X
19._POUND_7_/B___	__	__	__	__	AA	__	__	__	__	AC	__	__	X_X	X_X
20._POUND_7_/B___	AA	GG	AA	CT	AA	CC	AA	CT	GG	AC	TT	GG	X_X	X_X
21._POUND_7_/B___	__	GG	AA	AG	AA	GG	AA	AG	CC	AC	TT	GG	X_X	X_X

Input profile: POUND_7_/B

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Mars Center for Cocoa Science, Brazil

Location: 1611 9

Dapeng Zhang, 2016

1._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 3

Dapeng Zhang, 2016

2._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

3._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

4._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

5._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 4 > FP

Dapeng Zhang, 2016

6._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 11 > F

Dapeng Zhang, 2016

7._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 10 > F

Dapeng Zhang, 2016

8._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 1 > FP

Dapeng Zhang, 2016

9._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 13

Dapeng Zhang, 2016

10._POUND_7_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1611 2

Dapeng Zhang, 2016

11._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

12._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

13._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

14._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11 > FP4

15._POUND_7_/B GC-01-114-6-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

16._POUND_7_/B

identical
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F407 T3

Dapeng Zhang, 2016

17._POUND_7_/B RUQ_24

identical
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

18._POUND_7_/B RUQ_24

identical
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.185 IMC
0.266 Nan
0.488

19._POUND_7_/B RUQ_24B

identical
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

20._POUND_7_/B RUQ_24

98.8 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

21._POUND_7_/B RUQ_24

48.6 %
35 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25