SNP Profiles of NA149   View Data

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 Key

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_Input profile
CCCCTTGGCCCCTTCCGGCCGGTTAACC
1._RUQ_801
GGCCTTGGCC__CCCCGG___CC
2._RUQ_801
GG________GG___CC
3._RUQ_801
CCGG_GGGG_AAGG_CCGGAA_GG
 151617181920212223242526  
_Input profile
AAGGCCCCAAGGAAGGAAGGCCCCX_XX_X
1._RUQ_801
AAGGCC_AAGGAACCAAGGCCCCX_XX_X
2._RUQ_801
AAGG____AA____CCX_XX_X
3._RUQ_801
AAGGGGGGAAGGAAGGAAGGGGCCX_XX_X

Input profile: NA_149 NA149

 
Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

1._NA_149 RUQ_801

80 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._NA_149 RUQ_801

71.4 %
7 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._NA_149 RUQ_801

59.1 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144