SNP Profiles of "POUND 19 /A"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
2. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
3. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
4. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
5. _GC-01-040-2-17
GGGTATAACCCTCCCTAAGTTTTTAGCC
6. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
7. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
8. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
9. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
10. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
11. _GC-01-040-2-17
GGGGATGGCCTTCCCTACGGCTTTGGAA
12. _GC-01-40-2-17
GGCCATGGGGAACCAGACCCAGAAGGAC
13. _GC-01-40-2-17
GGACATAAGGAGCCAGAAACAAAAAGCC
14. _1213_2
GG___AT_______________ACGGCT______AA
15. _1213_3
GG___AT_______________ACGGCT______AA
16. _1213_5
GG___AT_______________ACGGCT______AA
17. _1213_9
GG___AT_______________ACGGCT______AA
18. _1213_10
GG___AT_______________ACGGCT______AA
19. _1213_11
GG___AT_______________ACGGCT______AA
20. _1213_13
GG___AT_______________ACGGCT______AA
21. _1213_16
GG___AT_______________ACGGCT______AA
22. _1213_12_>_F
GG___AT_______________ACGGCT______AA
23. _1213_6_>_FP
GG___AT_______________ACGGCT______AA
24. _1213_8
GG___AT_______________AAGTTT______CC
25. _RUQ_27
_______________TTCC___ACGGCT___GGAC
26. _RUQ_27
GG___AT_______________ACGGCT______AC
27. _POUND_19_/A_[POU]
GG___AT_______________ACGGCT______AC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
2. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
3. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
4. _GC-01-040-2-17
GGAAGGCCAT___GGAACTGGGGATCGAG
5. _GC-01-040-2-17
CCAGGGCTTTAGGGATCCAGAAAACGAG
6. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
7. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
8. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
9. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
10. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
11. _GC-01-040-2-17
GGAAGGCCATGGGGAACTGGGGATCGAG
12. _GC-01-40-2-17
CCAAGGGGATGGGGAAAGGGGGATCG___
13. _GC-01-40-2-17
GGAGGGAGAAAGGGATGGAGAAAACG___
14. _1213_2
GGAA___CC_________AA______GG______AG
15. _1213_3
GGAA___CC_________AA______GG______AG
16. _1213_5
GGAA___CC_________AA______GG______AG
17. _1213_9
GGAA___CC_________AA______GG______AG
18. _1213_10
GGAA___CC_________AA______GG______AG
19. _1213_11
GGAA___CC_________AA______GG______AG
20. _1213_13
GGAA___CC_________AA______GG______AG
21. _1213_16
GGAA___CC_________AA______GG______AG
22. _1213_12_>_F
GGAA___CC_________AA______GG______AG
23. _1213_6_>_FP
GGAA___CC_________AA______GG______AG
24. _1213_8
CCAG___CT_________AT______AA______AG
25. _RUQ_27
GGAA___CC___GGGGAA____________CGAG
26. _RUQ_27
GGAA___CC_________AA______GG______AG
27. _POUND_19_/A_[POU]
GGAA___CC_________AA______GG______AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
2. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
3. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
4. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
5. _GC-01-040-2-17
___AAACCCAGGGGGCGCCCCGGTTAAAA
6. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
7. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
8. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
9. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
10. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
11. _GC-01-040-2-17
___ACCCCTGGGTGGGGACCCAGCCAAAA
12. _GC-01-40-2-17
AAACCC___GGACGGCGACGG___GG___AA
13. _GC-01-40-2-17
GGAAAC___AGCCGGCGCCGG___AA___AA
14. _1213_2
______CCCT___GT___GGAC______CCAA___
15. _1213_3
______CCCT___GT___GGAC______CCAA___
16. _1213_5
______CCCT___GT___GGAC______CCAA___
17. _1213_9
______CCCT___GT___GGAC______CCAA___
18. _1213_10
______CCCT___GT___GGAC______CCAA___
19. _1213_11
______CCCT___GT___GGAC______CCAA___
20. _1213_13
______CCCT___GT___GGAC______CCAA___
21. _1213_16
______CCCT___GT___GGAC______CCAA___
22. _1213_12_>_F
______CCCT___GT___GGAC______CCAA___
23. _1213_6_>_FP
______CCCT___GT___GGAC______CCAA___
24. _1213_8
______ACCC___GG___CGCC______TTAA___
25. _RUQ_27
______CCCT___GT___CGACCC___CC______
26. _RUQ_27
______CCCT___GT___GGAC______CCAA___
27. _POUND_19_/A_[POU]
______CCCT___GT___GGAC______CCAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
2. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
3. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
4. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
5. _GC-01-040-2-17
AACTTTGGAATTTTTTCCCCAACCCGTT
6. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
7. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
8. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
9. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
10. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
11. _GC-01-040-2-17
AACTCTGGAGTTGTTTCCGGAACGCGCT
12. _GC-01-40-2-17
AA______CCAGAAACAACCCCAGCG___AG
13. _GC-01-40-2-17
AA______CCAAAAAAAACCGGAGGG___AA
14. _1213_2
_________GG_____________________CG___CT
15. _1213_3
_________GG_____________________CG___CT
16. _1213_5
_________GG_____________________CG___CT
17. _1213_9
_________GG_____________________CG___CT
18. _1213_10
_________GG_____________________CG___CT
19. _1213_11
_________GG_____________________CG___CT
20. _1213_13
_________GG_____________________CG___CT
21. _1213_16
_________GG_____________________CG___CT
22. _1213_12_>_F
_________GG_____________________CG___CT
23. _1213_6_>_FP
_________GG_____________________CG___CT
24. _1213_8
_________GG_____________________CC___TT
25. _RUQ_27
______CTGGAG______TTCC______CGCGTT
26. _RUQ_27
_________GG_____________________CG___CT
27. _POUND_19_/A_[POU]
_________GG_____________________CG___CT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
2. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
3. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
4. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
5. _GC-01-040-2-17
CCGGCTCCCCAACTAACCTTCGCCGGGG
6. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
7. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
8. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
9. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
10. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
11. _GC-01-040-2-17
CCGGCTGGCCAACTAACTTTCCCCGGGG
12. _GC-01-40-2-17
GGGGAGGGGGAAAGAA___AA___GGGGCC
13. _GC-01-40-2-17
GGGGAGCCGGAAAGAA___AA___GGGGCC
14. _1213_2
______CTGG___AACTAA_________CCGG___
15. _1213_3
______CTGG___AACTAA_________CCGG___
16. _1213_5
______CTGG___AACTAA_________CCGG___
17. _1213_9
______CTGG___AACTAA_________CCGG___
18. _1213_10
______CTGG___AACTAA_________CCGG___
19. _1213_11
______CTGG___AACTAA_________CCGG___
20. _1213_13
______CTGG___AACTAA_________CCGG___
21. _1213_16
______CTGG___AACTAA_________CCGG___
22. _1213_12_>_F
______CTGG___AACTAA_________CCGG___
23. _1213_6_>_FP
______CTGG___AACTAA_________CCGG___
24. _1213_8
______CTCC___AACTAA_________CCGG___
25. _RUQ_27
___GG_______________AACC______CC___GG
26. _RUQ_27
______CTGG___AACTAA_________CCGG___
27. _POUND_19_/A_[POU]
______CTGG___AACTAA_________CCGG___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
2. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
3. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
4. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
5. _GC-01-040-2-17
ATCTGGTTCCCCCTTTGTACGGTTTTAC
6. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
7. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
8. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
9. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
10. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
11. _GC-01-040-2-17
AACCGGTTCCTTTTCTGTCCGTTTTTAA
12. _GC-01-40-2-17
AAGGGG______AAAA___AC___AAAAAGAA
13. _GC-01-40-2-17
ATAGGG______GGAG___AC___CCAAAGAC
14. _1213_2
AA_________CC______CT______GTTT___AA
15. _1213_3
AA_________CC______CT______GTTT___AA
16. _1213_5
AA_________CC______CT______GTTT___AA
17. _1213_9
AA_________CC______CT______GTTT___AA
18. _1213_10
AA_________CC______CT______GTTT___AA
19. _1213_11
AA_________CC______CT______GTTT___AA
20. _1213_13
AA_________CC______CT______GTTT___AA
21. _1213_16
AA_________CC______CT______GTTT___AA
22. _1213_12_>_F
AA_________CC______CT______GTTT___AA
23. _1213_6_>_FP
AA_________CC______CT______GTTT___AA
24. _1213_8
AT_________CC______TT______GGTT___AC
25. _RUQ_27
______GGTT__________________GT___-___
26. _RUQ_27
AA_________CC______CT______GTTT___AA
27. _POUND_19_/A_[POU]
AA_________CC______CT______GTTT___AA
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
2. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
3. _GC-01-040-2-17
GGCTCCTT___AGCCACAGCCAGACX_XX_X
4. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
5. _GC-01-040-2-17
GGCTCCTTCGAGCCAAAGCCGGCCX_XX_X
6. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
7. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
8. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
9. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
10. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
11. _GC-01-040-2-17
GGCTCCTTCCAGCCACAGCCAGACX_XX_X
12. _GC-01-40-2-17
GGAGGGAAGGAGGGAC___CCAGACX_XX_X
13. _GC-01-40-2-17
GGAGGGAACGAGGGAA___CCGGCCX_XX_X
14. _1213_2
___CT___TTCCAGCC_______________X_XX_X
15. _1213_3
___CT___TTCCAGCC_______________X_XX_X
16. _1213_5
___CT___TT___AGCC_______________X_XX_X
17. _1213_9
___CT___TTCCAGCC_______________X_XX_X
18. _1213_10
___CT___TTCCAGCC_______________X_XX_X
19. _1213_11
___CT___TTCCAGCC_______________X_XX_X
20. _1213_13
___CT___TTCCAGCC_______________X_XX_X
21. _1213_16
___CT___TTCCAGCC_______________X_XX_X
22. _1213_12_>_F
___CT___TTCCAGCC_______________X_XX_X
23. _1213_6_>_FP
___CT___TTCCAGCC_______________X_XX_X
24. _1213_8
___CT___TTCGAGCC_______________X_XX_X
25. _RUQ_27
______CCTTCCAG__________________X_XX_X
26. _RUQ_27
___CT___TTCCAGCC_______________X_XX_X
27. _POUND_19_/A_[POU]
___CT___TTCCAGCC_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._POUND_19_/A GC-01-040-2-17
Location: Tree: 2
Notes: 2
 Mars, 2018
2._POUND_19_/A GC-01-040-2-17
Location: Tree: 3
Notes: 3
 Mars, 2018
3._POUND_19_/A GC-01-040-2-17
Location: Tree: 5
Notes: 5
 Mars, 2018
4._POUND_19_/A GC-01-040-2-17
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018
5._POUND_19_/A GC-01-040-2-17
Location: Tree: 8
Notes: 8
 Mars, 2018
6._POUND_19_/A GC-01-040-2-17
Location: Tree: 9
Notes: 9
 Mars, 2018
7._POUND_19_/A GC-01-040-2-17
Location: Tree: 10
Notes: 10
 Mars, 2018
8._POUND_19_/A GC-01-040-2-17
Location: Tree: 11
Notes: 11
 Mars, 2018
9._POUND_19_/A GC-01-040-2-17
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018
10._POUND_19_/A GC-01-040-2-17
Location: Tree: 13
Notes: 13
 Mars, 2018
11._POUND_19_/A GC-01-040-2-17
Location: Tree: 16
Notes: 16
 Mars, 2018
12._POUND_19_/A GC-01-40-2-17
Location: Field: 1, Block: 2, Rep: 13, Tree: 12 > FP2
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018
13._POUND_19_/A GC-01-40-2-17
Location: Field: 1, Block: 2, Rep: 13, Tree: 8
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018
14._POUND_19_/A
Location: 1213 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
15._POUND_19_/A
Location: 1213 3
 Dapeng Zhang, 2016
16._POUND_19_/A
Location: 1213 5
 Dapeng Zhang, 2016
17._POUND_19_/A
Location: 1213 9
 Dapeng Zhang, 2016
18._POUND_19_/A
Location: 1213 10
 Dapeng Zhang, 2016
19._POUND_19_/A
Location: 1213 11
 Dapeng Zhang, 2016
20._POUND_19_/A
Location: 1213 13
 Dapeng Zhang, 2016
21._POUND_19_/A
Location: 1213 16
 Dapeng Zhang, 2016
22._POUND_19_/A
Location: 1213 12 > F
 Dapeng Zhang, 2016
23._POUND_19_/A
Location: 1213 6 > FP
 Dapeng Zhang, 2016
24._POUND_19_/A
Location: 1213 8
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

25._POUND_19_/A RUQ 27
 Dapeng Zhang, 2014
26._POUND_19_/A RUQ 27
 Dapeng Zhang, 2016

Malaysian Cocoa Board (MCB) Malaysia

27._POUND_19_/A
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133