SNP Profiles of "NA 95"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-122-6-19
GGGGATAGCCCTCCTTCCTTCCAAAGAC
2. _GC-01-122-6-19
GGGGATAGCCCTCCTT___TTCCAAAGAC
3. _GC-01-122-6-19
GGGGTTGGCCTTAACCACGTCTAAGGAC
4. _GC-01-122-6-19
GGGGATAG___CTCCTTCCTTCCAA___AC
5. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAA___AC
6. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
7. _GC-08-168-4-11
GGGGTT___CCTTAACCACGTCTAAGGAC
8. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
9. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
10. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
11. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
12. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAA___AC
13. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
14. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
15. _GC-08-168-4-11
GGGGATAGCCCTCCTTCCTTCCAAAGAC
16. _1619_9_>_FP
GG___TT_______________ACGTCT______AC
17. _8411_3
GG___TT_______________ACGTCT______AC
18. _1619_12
GG___AT_______________CCTTCC______AC
19. _1619_1_>_FP
GG___AT_______________CCTTCC______AC
20. _1619_3_>_FP
GG___AT__________________TTCC______AC
21. _8411_1
GG___AT_______________CCTTCC______AC
22. _8411_2
GG___AT_______________CCTTCC______AC
23. _8411_4
GG___AT_______________CCTTCC______AC
24. _8411_5
GG___AT_______________CCTTCC______AC
25. _8411_6
GG___AT_______________CCTTCC______AC
26. _8411_7
GG___AT_______________CCTTCC______AC
27. _8411_9
GG___AT_______________CCTTCC______AC
28. _8411_10
GG___AT_______________CCTTCC______AC
29. _8411_11
GG___AT_______________CCTTCC______AC
30. _8411_12
GG___AT_______________CCTTCC______AC
31. _Marper_D_222
GG___TT_______________ACGTCC______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-122-6-19
CGAAGGCTAAAGAGATCTAGGGTTCGAG
2. _GC-01-122-6-19
CGAAGGCTAAAGAGATCTAGGGTTCGAG
3. _GC-01-122-6-19
CCAGGGCCATAGGGAATTGGGGAACCAA
4. _GC-01-122-6-19
CGAAGGCTAAAG___ATCTAGGGTTCGAG
5. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
6. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
7. _GC-08-168-4-11
CCAGGGCCATAGGGAATTGGGGAACCAA
8. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
9. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
10. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
11. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
12. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
13. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
14. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
15. _GC-08-168-4-11
CGAAGGCTAAAGAGATCTAGGGTTCGAG
16. _1619_9_>_FP
CCAG___CC_________AA______GG______AA
17. _8411_3
CCAG___CC_________AA______GG______AA
18. _1619_12
CGAA___CT_________AT______GG______AG
19. _1619_1_>_FP
CGAA___CT_________AT______GG______AG
20. _1619_3_>_FP
CGAA___CT_________AT______GG______AG
21. _8411_1
CGAA___CT_________AT______GG______AG
22. _8411_2
CGAA___CT_________AT______GG______AG
23. _8411_4
CGAA___CT_________AT______GG______AG
24. _8411_5
CGAA___CT_________AT______GG______AG
25. _8411_6
CGAA___CT_________AT______GG______AG
26. _8411_7
CGAA___CT_________AT______GG______AG
27. _8411_9
CGAA___CT_________AT______GG______AG
28. _8411_10
CGAA___CT_________AT______GG______AG
29. _8411_11
CGAA___CT_________AT______GG______AG
30. _8411_12
CGAA___CT_________AT______GG______AG
31. _Marper_D_222
CCAA___CC_________AA______GG______AA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-122-6-19
CCCCTTAGTTAGCCACCCAATTGGAGAG
2. _GC-01-122-6-19
CCCCTTAGTTAGCCACCCAATTGGAGAG
3. _GC-01-122-6-19
CCCCTTGGTTAACCCCTTGGTTGGAAAG
4. _GC-01-122-6-19
CCCCTTAGTTAGCCACCCAATTGGAGAG
5. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
6. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
7. _GC-08-168-4-11
CCCCTTGGTTAACCCCTTGGTTGGAAAG
8. _GC-08-168-4-11
CCCC___AGTTAGCCACCCAATTGGAGAG
9. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
10. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
11. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
12. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
13. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
14. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAG___
15. _GC-08-168-4-11
CCCCTTAGTTAGCCACCCAATTGGAGAG
16. _1619_9_>_FP
___CCTT___TT___CCCC______TTGG______
17. _8411_3
___CCTT___TT___CCCC______TTGG______
18. _1619_12
___CCTT___TT___CCAC______TTGG______
19. _1619_1_>_FP
___CCTT___TT___CCAC______TTGG______
20. _1619_3_>_FP
___CCTT___TT___CCAC______TTGG______
21. _8411_1
___CCTT___TT___CCAC______TTGG______
22. _8411_2
___CCTT___TT___CCAC______TTGG______
23. _8411_4
___CC______TT___CCAC______TTGG______
24. _8411_5
___CCTT___TT___CCAC______TTGG______
25. _8411_6
___CCTT___TT___CCAC______TTGG______
26. _8411_7
___CCTT___TT___CCAC______TTGG______
27. _8411_9
___CCTT___TT___CCAC______TTGG______
28. _8411_10
___CCTT___TT___CCAC______TTGG______
29. _8411_11
___CCTT___TT___CCAC______TTGG______
30. _8411_12
___CCTT___TT___CCAC______TTGG______
31. _Marper_D_222
___CCTT___GG___GGAA______CCAA______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-122-6-19
CTCTGTGGGTGGGTACGGAAGGCGCCCC
2. _GC-01-122-6-19
CTCTGTGGGTGGGTACGGAAGGCGCCCC
3. _GC-01-122-6-19
TTCCGGGGTTTTGTAAGGAAGGCGCCCC
4. _GC-01-122-6-19
CTCTGTGGGTGGGTACGGAAGGCGCCCC
5. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
6. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
7. _GC-08-168-4-11
TTCCGGGGTTTTGTAAGGAAGGCGCCCC
8. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
9. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
10. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
11. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
12. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
13. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
14. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
15. _GC-08-168-4-11
CTCTGTGGGTGGGTACGGAAGGCGCCCC
16. _1619_9_>_FP
______GG_____________________GG___CC___
17. _8411_3
______GG_____________________GG___CC___
18. _1619_12
______GT_____________________GG___CC___
19. _1619_1_>_FP
______GT_____________________GG___CC___
20. _1619_3_>_FP
______GT_____________________GG___CC___
21. _8411_1
______GT_____________________GG___CC___
22. _8411_2
______GT_____________________GG___CC___
23. _8411_4
______GT_____________________GG___CC___
24. _8411_5
______GT_____________________GG___CC___
25. _8411_6
______GT_____________________GG___CC___
26. _8411_7
______GT_____________________GG___CC___
27. _8411_9
______GT_____________________GG___CC___
28. _8411_10
______GT_____________________GG___CC___
29. _8411_11
______GT_____________________GG___CC___
30. _8411_12
______GT_____________________GG___CC___
31. _Marper_D_222
______GG_____________________CG___CT___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-122-6-19
AGTTGGCTAACTAGCTCTCCCCAAGTAA
2. _GC-01-122-6-19
AGTTGGCTAACTAGCTCTCCCCAAGTAA
3. _GC-01-122-6-19
AGTTGGCTAACTGGTTTTCCCTAATTAA
4. _GC-01-122-6-19
AGTTGGCTAACTAGCTCTCCCCAAGTAA
5. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
6. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
7. _GC-08-168-4-11
AGTTGGCTAACTGGTTTTCCCTAATTAA
8. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
9. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
10. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
11. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
12. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
13. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
14. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
15. _GC-08-168-4-11
AGTTGGCTAACTAGCTCTCCCCAAGTAA
16. _1619_9_>_FP
___TTGG___AACTGG_________CTAA___AA
17. _8411_3
___TTGG___AACTGG_________CTAA___AA
18. _1619_12
___TTGG___AACTAG_________CCAA___AA
19. _1619_1_>_FP
___TTGG___AACTAG_________CCAA___AA
20. _1619_3_>_FP
___TTGG___AACTAG_________CCAA___AA
21. _8411_1
___TTGG___AACTAG_________CCAA___AA
22. _8411_2
___TTGG___AACTAG_________CCAA___AA
23. _8411_4
___TTGG___AACTAG_________CCAA___AA
24. _8411_5
___TTGG___AACTAG_________CCAA___AA
25. _8411_6
___TTGG___AACTAG_________CCAA___AA
26. _8411_7
___TTGG___AACTAG_________CCAA___AA
27. _8411_9
___TTGG___AACTAG_________CCAA___AA
28. _8411_10
___TTGG___AACTAG_________CCAA___AA
29. _8411_11
___TTGG___AACTAG_________CCAA___AA
30. _8411_12
___TTGG___AACTAG_________CCAA___AA
31. _Marper_D_222
___CCGG___ATTTAG_________CCGG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-122-6-19
CCAGATTTTTTTCTGTCCGTCTTTAAGG
2. _GC-01-122-6-19
CCAGATTTTT___CTGTCCGTCTTTAAGG
3. _GC-01-122-6-19
CCAGAATTTTTTTTGGCCTTCCTTAAGG
4. _GC-01-122-6-19
CCAGATTTTTTTCTGTCCGTCTTTAAGG
5. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCT___AAGG
6. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
7. _GC-08-168-4-11
CCAGAATTTTTTTTGGCCTTCCTTAAGG
8. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTT___GG
9. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
10. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
11. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
12. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
13. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
14. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
15. _GC-08-168-4-11
CCAGATTTTTTTCTGTCCGTCTTTAAGG
16. _1619_9_>_FP
_________TT______TT______TTCC___AA___
17. _8411_3
_________TT______TT______TTCC___AA___
18. _1619_12
_________TT______CT______GTCT___AA___
19. _1619_1_>_FP
_________TT______CT______GTCT___AA___
20. _1619_3_>_FP
_________TT______CT______GTCT___AA___
21. _8411_1
_________TT______CT______GTCT___AA___
22. _8411_2
_________TT______CT______GTCT___AA___
23. _8411_4
_________TT______CT______GTCT_________
24. _8411_5
_________TT______CT______GTCT___AA___
25. _8411_6
_________TT______CT______GTCT___AA___
26. _8411_7
_________TT______CT______GTCT___AA___
27. _8411_9
_________TT______CT______GTCT___AA___
28. _8411_10
_________TT______CT______GTCT___AA___
29. _8411_11
_________TT______CT______GTCT___AA___
30. _8411_12
_________TT______CT______GTCT___AA___
31. _Marper_D_222
_________CC______CC______TTTT___CC___
 85 86 87 88 89 90 91 92 93 94 95    
1. _GC-01-122-6-19
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
2. _GC-01-122-6-19
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
3. _GC-01-122-6-19
TTTTCCGGAATTACAAAAAAAAX_XX_XX_X
4. _GC-01-122-6-19
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
5. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
6. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
7. _GC-08-168-4-11
TTTTCCGGAATTACAAAAAAAAX_XX_XX_X
8. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
9. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
10. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
11. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
12. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
13. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
14. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
15. _GC-08-168-4-11
TTCCCTCGAACCACAAACAGAAX_XX_XX_X
16. _1619_9_>_FP
TT___CCGGAATT_______________X_XX_XX_X
17. _8411_3
TT___CCGGAATT_______________X_XX_XX_X
18. _1619_12
TT___CTCGAACC_______________X_XX_XX_X
19. _1619_1_>_FP
TT___CTCGAACC_______________X_XX_XX_X
20. _1619_3_>_FP
TT___CTCGAACC_______________X_XX_XX_X
21. _8411_1
TT___CTCGAACC_______________X_XX_XX_X
22. _8411_2
TT___CTCGAACC_______________X_XX_XX_X
23. _8411_4
TT___CTCGAACC_______________X_XX_XX_X
24. _8411_5
TT___CTCGAACC_______________X_XX_XX_X
25. _8411_6
TT___CTCGAACC_______________X_XX_XX_X
26. _8411_7
TT___CTCGAACC_______________X_XX_XX_X
27. _8411_9
TT___CTCGAACC_______________X_XX_XX_X
28. _8411_10
TT___CTCGAACC_______________X_XX_XX_X
29. _8411_11
TT___CTCGAACC_______________X_XX_XX_X
30. _8411_12
TT___CTCGAACC_______________X_XX_XX_X
31. _Marper_D_222
TT___TTCCAACC_______________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._NA_95 GC-01-122-6-19
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._NA_95 GC-01-122-6-19
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018
3._NA_95 GC-01-122-6-19
Location: Tree: 9
Notes: 9 > FP2
 Mars, 2018
4._NA_95 GC-01-122-6-19
Location: Tree: 12
Notes: 12
 Mars, 2018
5._NA_95 GC-08-168-4-11
Location: Tree: 1
Notes: 1
 Mars, 2018
6._NA_95 GC-08-168-4-11
Location: Tree: 2
Notes: 2
 Mars, 2018
7._NA_95 GC-08-168-4-11
Location: Tree: 3
Notes: 3
 Mars, 2018
8._NA_95 GC-08-168-4-11
Location: Tree: 4
Notes: 4
 Mars, 2018
9._NA_95 GC-08-168-4-11
Location: Tree: 5
Notes: 5
 Mars, 2018
10._NA_95 GC-08-168-4-11
Location: Tree: 6
Notes: 6
 Mars, 2018
11._NA_95 GC-08-168-4-11
Location: Tree: 7
Notes: 7
 Mars, 2018
12._NA_95 GC-08-168-4-11
Location: Tree: 9
Notes: 9
 Mars, 2018
13._NA_95 GC-08-168-4-11
Location: Tree: 10
Notes: 10
 Mars, 2018
14._NA_95 GC-08-168-4-11
Location: Tree: 11
Notes: 11
 Mars, 2018
15._NA_95 GC-08-168-4-11
Location: Tree: 12
Notes: 12
 Mars, 2018
16._NA_95
Location: 1619 9 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
17._NA_95
Location: 8411 3
 Dapeng Zhang, 2016
18._NA_95
Location: 1619 12
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
19._NA_95
Location: 1619 1 > FP
 Dapeng Zhang, 2016
20._NA_95
Location: 1619 3 > FP
 Dapeng Zhang, 2016
21._NA_95
Location: 8411 1
 Dapeng Zhang, 2016
22._NA_95
Location: 8411 2
 Dapeng Zhang, 2016
23._NA_95
Location: 8411 4
 Dapeng Zhang, 2016
24._NA_95
Location: 8411 5
 Dapeng Zhang, 2016
25._NA_95
Location: 8411 6
 Dapeng Zhang, 2016
26._NA_95
Location: 8411 7
 Dapeng Zhang, 2016
27._NA_95
Location: 8411 9
 Dapeng Zhang, 2016
28._NA_95
Location: 8411 10
 Dapeng Zhang, 2016
29._NA_95
Location: 8411 11
 Dapeng Zhang, 2016
30._NA_95
Location: 8411 12
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

31._NA_95
Location: Marper D 222
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133