SNP Profiles of "B 12 /1 [POU]"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-05-093-2-44
______GGGGAA___AA______CCTTCCTT___
2. _GC-05-093-2-44
______GGGGAA___AA______CCTTCCTT___
3. _GC-05-093-2-44
______GGGGAA___AA______CCTTCCTT___
4. _GC-05-093-2-44
______GGGGAA___AA______CCTTCCTT___
5. _GC-05-093-2-44
______GGGGAA___AA______CCTTCCTT___
6. _5244_2
______GG___AA___________________________
7. _5244_3
______GG___AA___________________________
8. _5244_4
______GG___AA___________________________
9. _5244_5
______GG___AA___________________________
10. _5244_1_>_FP
______GG___AA___________________________
11. _RUQ_1541
CTAC_________TT___CCGG____________TT
12. _RUQ_1541
______GGCCAA___AA______GGAACCAA___
13. _RUQ_1541
______________________________TTCC______
14. _RUQ_1541
______GG___AA___________________________
15. _6B_F461_T10
______GG___AA___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-05-093-2-44
___CCGTCTATGG______AA___CCAAGGCC
2. _GC-05-093-2-44
___CCGTCTATGG______AA___CCAAGGCC
3. _GC-05-093-2-44
___CCGT___ATGG______AA___CCAAGGCC
4. _GC-05-093-2-44
___CCGTCTATGG______AA___CCAAGGCC
5. _GC-05-093-2-44
___CCGTCTATGG______AA___CCAAGGCC
6. _5244_2
___CCGTCT____________AA___CCAA___CC
7. _5244_3
___CCGT_______________AA___CCAA___CC
8. _5244_4
___CCGTCT____________AA___CCAA___CC
9. _5244_5
___CCGTCT____________AA___CCAA___CC
10. _5244_1_>_FP
___CCGTCT____________AA___CCAA___CC
11. _RUQ_1541
ATCC____________TTAG___TT___AA______
12. _RUQ_1541
___CCACAGATGG______AA___GGAAGGGG
13. _RUQ_1541
___CCGTCT___GG______AA___CCAA___CC
14. _RUQ_1541
___CCGTCT____________AA___CCAA___CC
15. _6B_F461_T10
___CCGTCT____________AA___CCAA___CC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-05-093-2-44
______TTGG___GGTTCCAA___AGAACCAA
2. _GC-05-093-2-44
______TTGG___GGTTCCAA___AGAACCAA
3. _GC-05-093-2-44
______TTGG___GGTTCCAA___AGAACCAA
4. _GC-05-093-2-44
______TTGG___GGTTCCAA___AGAACCAA
5. _GC-05-093-2-44
______TTGG___GGTTCCAA___AGAACCAA
6. _5244_2
__________________TT_________AG______AA
7. _5244_3
__________________TT_________AG______AA
8. _5244_4
__________________TT_________AG______AA
9. _5244_5
__________________TT_________AG______AA
10. _5244_1_>_FP
__________________TT_________AG______AA
11. _RUQ_1541
CTAA___GGAC____________CC____________
12. _RUQ_1541
______AAGG___GGTTGGAA___AGAAGG___
13. _RUQ_1541
_________GG___GGTT_______________CCAA
14. _RUQ_1541
__________________TT_________AG______AA
15. _6B_F461_T10
__________________TT_________AG______AA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-05-093-2-44
______AA___CCCT___AGGTGGGG___CCCT
2. _GC-05-093-2-44
______AA___CCCT___AGGTGGGG___CCCT
3. _GC-05-093-2-44
______AA___CCCT___AGGTGGGG___CCCT
4. _GC-05-093-2-44
______AA___CCCT___AGGTGGGG___CCCT
5. _GC-05-093-2-44
______AA___CCCT___AGGTGGGG___CCCT
6. _5244_2
____________CCCT______GT___GG___CC___
7. _5244_3
____________CCCT______GT___GG___CC___
8. _5244_4
____________CCCT______GT___GG___CC___
9. _5244_5
____________CCCT______GT___GG___CC___
10. _5244_1_>_FP
____________CCCT______GT___GG___CC___
11. _RUQ_1541
___AC___CTCC___AG_________GGAACCCT
12. _RUQ_1541
GG___AA___CC______AGACGGGG___CCAG
13. _RUQ_1541
____________CCCT______GT___GG___CCCT
14. _RUQ_1541
____________CCCT______GT___GG___CC___
15. _6B_F461_T10
____________CCCT______GT___GG___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-05-093-2-44
AACC_________AAAA___GGTTTTGTAG___
2. _GC-05-093-2-44
AACC_________AAAA___GGTTTTGTAG___
3. _GC-05-093-2-44
AACC_________AAAA___GGTTTTGTAG___
4. _GC-05-093-2-44
AACC_________AAAA___GGTTTTGTAG___
5. _GC-05-093-2-44
AACC_________AAAA___GGTTTTGTAG___
6. _5244_2
___CC_________AA_______________GT______
7. _5244_3
___CC_________AA_______________GT______
8. _5244_4
___CC_________AA_______________GT______
9. _5244_5
___CC_________AA_______________GT______
10. _5244_1_>_FP
___CC_________AA_______________GT______
11. _RUQ_1541
______TTAACCAA___CG______TTGTAGCT
12. _RUQ_1541
___GG____________AA___AA______ACAG___
13. _RUQ_1541
___CC________________________TTGTAG___
14. _RUQ_1541
___CC_________AA_______________GT______
15. _6B_F461_T10
___CC_________AA_______________GT______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-05-093-2-44
TTTTTT___CC___CGAAGGGGTTGGAGCT
2. _GC-05-093-2-44
TTTTTT___CC___CGAAGGGGTTGGAGCT
3. _GC-05-093-2-44
TTTTTT___CC___CGAAGGGGTTGGAGCT
4. _GC-05-093-2-44
TTTTTT___CC___CGAAGGGGTTGGAGCT
5. _GC-05-093-2-44
TT___TT___CC___CGAAGGGGTTGGAGCT
6. _5244_2
________________________GG___TT______CT
7. _5244_3
________________________GG___TT______CT
8. _5244_4
________________________GG___TT______CT
9. _5244_5
________________________GG___TT______CT
10. _5244_1_>_FP
________________________GG___TT______CT
11. _RUQ_1541
_________TTCCAACT___GG_________AG___
12. _RUQ_1541
AAAAAA___CC___CGAACC___AACCAGAG
13. _RUQ_1541
______TT___CC_________GGGGTT___-___
14. _RUQ_1541
________________________GG___CT______CT
15. _6B_F461_T10
________________________GG___TT______CT
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-05-093-2-44
GGCT___AACTAGCT______TTCC___CCAG
2. _GC-05-093-2-44
GGCT___AACTAGCT______TTCC___CCAG
3. _GC-05-093-2-44
GGCT___AACTAGCT______TTCC___CCAG
4. _GC-05-093-2-44
GGCT___AACTAGCT______TTCC___CCAG
5. _GC-05-093-2-44
GGCT___AACTAGCT______TTCC___CCAG
6. _5244_2
GG______AACTAG__________________CCAG
7. _5244_3
GG______AACTAG__________________CCAG
8. _5244_4
GG______AACTAG__________________CCAG
9. _5244_5
GG______AACTAG__________________CCAG
10. _5244_1_>_FP
GG______AACTAG__________________CCAG
11. _RUQ_1541
______CG______AGCTTTAA______CT___AG
12. _RUQ_1541
GGAG___AAAGAG_________AA______GGAG
13. _RUQ_1541
_______________AGCC_______________CC___
14. _RUQ_1541
GG______AACTAG__________________CCAG
15. _6B_F461_T10
GG______AACTAG__________________CCAG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-05-093-2-44
TTTTTTAG___ATCCCCTTTTTT______AC
2. _GC-05-093-2-44
___TTTTAG___ATCCCCTTTTTT______AC
3. _GC-05-093-2-44
TTTTTTAG___ATCCCCTTTTTT______AC
4. _GC-05-093-2-44
TTTTTTAG___ATCCCCTTTTTT______AC
5. _GC-05-093-2-44
TTTTTTAG___ATCCCCTTTTTT______AC
6. _5244_2
___TT____________CC______TT____________
7. _5244_3
___TT____________CC______TT____________
8. _5244_4
___TT____________CC______TT____________
9. _5244_5
___TT____________CC______TT____________
10. _5244_1_>_FP
___TT____________CC______TT____________
11. _RUQ_1541
____________CT___CC____________GGAA___
12. _RUQ_1541
AATTAAAG_________GGAA___AA_________
13. _RUQ_1541
TT______AG___AT________________________
14. _RUQ_1541
___TT____________CC______TT____________
15. _6B_F461_T10
___TT____________CC______TT____________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-05-093-2-44
GTCC______TT___GG______TTTTCTCGGG
2. _GC-05-093-2-44
GTCC______TTCCGG______TTTTCTCGGG
3. _GC-05-093-2-44
GTCC______TT___GG______TTTTCTCGGG
4. _GC-05-093-2-44
GTCC______TT___GG______TTTTCTCGGG
5. _GC-05-093-2-44
GTCC______TT___GG______TTTTCTCGGG
6. _5244_2
GTCC_________CC_________TT___CTCGGG
7. _5244_3
GTCC_____________________TT___CTCGGG
8. _5244_4
GTCC_____________________TT___CTCGGG
9. _5244_5
GTCC_____________________TT___CTCGGG
10. _5244_1_>_FP
GTCC_____________________TT___CTCGGG
11. _RUQ_1541
GT___GGTT_________AAGG_________CG___
12. _RUQ_1541
ACGG______AGCCGG______AAAAAGCGGG
13. _RUQ_1541
GT_________CT_______________TTCTCGGG
14. _RUQ_1541
GTCC_________CC_________TT___CTCGGG
15. _6B_F461_T10
GTCC_________CC_________TT___CTCGGG
 127 128 129 130 131 132 133        
1. _GC-05-093-2-44
CC___CCAACCAGCCX_XX_XX_XX_XX_XX_XX_X
2. _GC-05-093-2-44
CC___CCAACCAGCCX_XX_XX_XX_XX_XX_XX_X
3. _GC-05-093-2-44
CC___CCAACCAGCCX_XX_XX_XX_XX_XX_XX_X
4. _GC-05-093-2-44
CC___CCAACCAGCCX_XX_XX_XX_XX_XX_XX_X
5. _GC-05-093-2-44
CC___CCAACCAGCCX_XX_XX_XX_XX_XX_XX_X
6. _5244_2
CC__________________X_XX_XX_XX_XX_XX_XX_X
7. _5244_3
CC__________________X_XX_XX_XX_XX_XX_XX_X
8. _5244_4
CC__________________X_XX_XX_XX_XX_XX_XX_X
9. _5244_5
CC__________________X_XX_XX_XX_XX_XX_XX_X
10. _5244_1_>_FP
CC__________________X_XX_XX_XX_XX_XX_XX_X
11. _RUQ_1541
___TT_______________X_XX_XX_XX_XX_XX_XX_X
12. _RUQ_1541
GG___CC___CCAGCCX_XX_XX_XX_XX_XX_XX_X
13. _RUQ_1541
_____________________X_XX_XX_XX_XX_XX_XX_X
14. _RUQ_1541
CC__________________X_XX_XX_XX_XX_XX_XX_X
15. _6B_F461_T10
CC__________________X_XX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._B_12_/1_[POU] GC-05-093-2-44
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._B_12_/1_[POU] GC-05-093-2-44
Location: Tree: 2
Notes: 2
 Mars, 2018
3._B_12_/1_[POU] GC-05-093-2-44
Location: Tree: 3
Notes: 3
 Mars, 2018
4._B_12_/1_[POU] GC-05-093-2-44
Location: Tree: 4
Notes: 4
 Mars, 2018
5._B_12_/1_[POU] GC-05-093-2-44
Location: Tree: 5
Notes: 5
 Mars, 2018
6._B_12_/1_[POU]
Location: 5244 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
7._B_12_/1_[POU]
Location: 5244 3
 Dapeng Zhang, 2016
8._B_12_/1_[POU]
Location: 5244 4
 Dapeng Zhang, 2016
9._B_12_/1_[POU]
Location: 5244 5
 Dapeng Zhang, 2016
10._B_12_/1_[POU]
Location: 5244 1 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

11._B_12_/1_[POU] RUQ 1541
 Lambert Motilal, 2023
12._B_12_/1_[POU] RUQ 1541
Notes: Reading_Collection
 Mars, 2018
13._B_12_/1_[POU] RUQ 1541
 Dapeng Zhang, 2014
14._B_12_/1_[POU] RUQ 1541
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

15._B_12_/1_[POU]
Location: 6B F461 T10
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129Tcm001s00947643 130Tcm002s20575712
131Tcm003s01336581 132Tcm003s07402719 133Tcm006s26664133