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OYA 2 B Group Name Theobroma cacao

Trinidad - CRU (1995)
Cocoa Research Unit. Report for 1995. The University of the West Indies.

Derivation: river OYApock.
Collected by Lachenaud/Mooleedhar.
Location: R. Oyapock, French Guiana.

Lachenaud et al (1997) [LAC97A] All are self incompatible.

Notes: Trinidad - CRU, 1995 [CRU95A] 1995 CIRAD/CRU collecting expedition.

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POPULATION

Guiltinan, Mark, 2019: 'Guiana' Population; Reference

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

GENOME/TRANSCRIPTOME DATA LINKS

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Guiltinan, Mark, 2019

BioProject: PRJNA558793 NCBI ENA FASTQ

Library Source: Genomic & Transcriptomic

Run: SRR14022536 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX10399139

BioSample: SAMN12500397

SampleName: OYA-2B

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000172

Run: SRR9938320 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686803

BioSample: SAMN12500397

SampleName: OYA-2B

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000172

Run: SRR9938324 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686799

BioSample: SAMN12500397

SampleName: OYA-2B

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000172

Run: SRR9938325 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686798

BioSample: SAMN12500397

SampleName: OYA-2B

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000172

Run: SRR9938224 NCBI ENA FASTQ

Library Source: Transcriptomic

Experiment: SRX6686899

BioSample: SAMN12500397

SampleName: OYA-2B

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000172

DISEASE

Phytophthora: Resistant; Guiltinan, Mark, 2019

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

REFERENCES

Trinidad - CRU (1995) Cocoa Research Unit. Report for 1995. The University of the West Indies.

Guiltinan, Mark (2019) Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI