SNP Profiles of GU 296 /H View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	GG	TT	AA	CC	AA	CC	AA	GG	GG	TT	TT	TT
1._RUQ_230	AA	TT	GG	TT	AA	CC	GG	CC	AA	GG	GG	CC	TT	CT
2._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	__	__	__
3._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
4._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
5._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
6._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
7._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
8._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
9._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
10._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
11._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
12._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
13._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
14._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
15._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
16._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
17._GC-01-076-4-12	__	__	__	TT	__	CC	GG	__	__	GG	GG	GG	__	__
18._GC-01-76-4-12	__	__	__	AA	__	__	GG	__	__	GG	CC	CC	__	__

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_Input profile	GG	GG	TT	AA	CC	AA	CC	AA	AT	CG	CC	TT	CC	GG
1._RUQ_230	AA	GG	CC	AA	CC	GG	CC	AC	AT	CC	AA	CT	CT	GG
2._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
3._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
4._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
5._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
6._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
7._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
8._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
9._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
10._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
11._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
12._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
13._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
14._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
15._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
16._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
17._GC-01-076-4-12	AA	GG	CT	GG	__	__	CC	AC	__	CC	AA	__	__	GG
18._GC-01-76-4-12	AA	CC	__	__	__	__	GG	AC	__	CC	AA	__	__	GG

	29	30	31	32	33	34	35	36	37	38
_Input profile	AA	AA	GG	CC	CC	TT	GG	CC	CC	TT	X_X	X_X	X_X	X_X
1._RUQ_230	AA	GG	GG	CC	AA	TT	GG	CC	AC	TT	X_X	X_X	X_X	X_X
2._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
3._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
4._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
5._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
6._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
7._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
8._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
9._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
10._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
11._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
12._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
13._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
14._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
15._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
16._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
17._GC-01-076-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X
18._GC-01-76-4-12	__	GG	__	__	AA	__	__	__	__	__	X_X	X_X	X_X	X_X

Input profile: SPEC_41_/6-18 RUQ_1325

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._GU_296_/H RUQ_230

71.1 %
38 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

GU
0.993

2._GU_296_/H GC-01-076-4-12

53.1 %
16 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

Mars, 2018

3._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

4._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

Mars, 2018

5._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15

Mars, 2018

6._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

Mars, 2018

7._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

Mars, 2018

8._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

Mars, 2018

9._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

Mars, 2018

10._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

Mars, 2018

11._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

12._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

13._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

14._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

15._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

16._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

17._GU_296_/H GC-01-076-4-12

50 %
17 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

18._GU_296_/H GC-01-76-4-12

21.4 %
14 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 4, Rep: 12, Tree: 2

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1404	4	TcSNP1253	5	TcSNP1230
6	TcSNP1144	7	TcSNP1062	8	TcSNP1053	9	TcSNP1019	10	TcSNP998
11	TcSNP872	12	TcSNP836	13	TcSNP800	14	TcSNP739	15	TcSNP731
16	TcSNP723	17	TcSNP702	18	TcSNP645	19	TcSNP644	20	TcSNP642
21	TcSNP602	22	TcSNP591	23	TcSNP589	24	TcSNP577	25	TcSNP529
26	TcSNP522	27	TcSNP421	28	TcSNP329	29	TcSNP305	30	TcSNP230
31	TcSNP189	32	TcSNP176	33	TcSNP144	34	TcSNP131	35	TcSNP52
36	TcSNP49	37	TcSNP19	38	TcSNP13

SNP Profiles of GU 296 /H View Data

Show/Hide Profiles

Input profile: SPEC_41_/6-18 RUQ_1325

1._GU_296_/H RUQ_230

71.1 % 38 shared markers

2._GU_296_/H GC-01-076-4-12

53.1 % 16 shared markers

3._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

4._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

5._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

6._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

7._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

8._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

9._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

10._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

11._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

12._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

13._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

14._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

15._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

16._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

17._GU_296_/H GC-01-076-4-12

50 % 17 shared markers

18._GU_296_/H GC-01-76-4-12

21.4 % 14 shared markers

71.1 %
38 shared markers

53.1 %
16 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

50 %
17 shared markers

21.4 %
14 shared markers