SNP Profiles matching PA 45 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AA	AC	GG	CT	AC	AG	CC	AA	GG	AA	CC	CT	GT
1._PA_45_[PER]___	GG	AA	AC	GG	CT	AC	AG	CC	AA	GG	AA	CC	CT	GT
2._SLA_16___	__	__	AC	GG	CT	AC	AG	CC	AA	__	AA	AC	CT	GG
3._PA_188_[PER]___	GG	AT	AC	GG	CT	AC	AA	CC	AA	GG	AA	AC	CC	GT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CG	AC	TT	AA	TT	GG	CC	CC	CT	CG	AA	CT	AG	CC
1._PA_45_[PER]___	CG	AC	TT	AA	TT	GG	CC	CC	CT	CG	AA	CT	AG	CC
2._SLA_16___	CG	CC	TT	__	__	GG	CC	CC	__	__	__	__	AG	CC
3._PA_188_[PER]___	CG	AC	TT	AA	TT	GG	CC	CC	CT	CG	AA	CT	AG	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	AA	CC	CC	TT	CT	CC	TT	CT	GG	GG	CC	X_X	X_X
1._PA_45_[PER]___	GG	AA	CC	CC	TT	CT	CC	TT	CT	GG	GG	CC	X_X	X_X
2._SLA_16___	__	__	__	__	TT	__	__	__	CT	GG	GG	__	X_X	X_X
3._PA_188_[PER]___	GG	AA	CC	CC	TT	TT	AC	TT	CT	CG	GG	CC	X_X	X_X

Input profile: PA_45_[PER]

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A F528 T3

Dapeng Zhang, 2014

1._PA_45_[PER]

identical
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 261

Dapeng Zhang, 2014

2._SLA_16 RUQ_1092

93.5 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._PA_188_[PER]

91.3 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 724

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP577
16	TcSNP591	17	TcSNP619	18	TcSNP645	19	TcSNP836	20	TcSNP872
21	TcSNP878	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520