SNP Profiles of CEPEC-44 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
1._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
2._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
3._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
4._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
5._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
6._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
7._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
8._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
9._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
10._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
11._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
12._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
13._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
14._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
15._NA	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT
16._GC-08-036-1-47	AA	AA	CT	AC	AG	AG	CT	CC	CC	CT	AG	TT	CT	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
1._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
2._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
3._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
4._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
5._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
6._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
7._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
8._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
9._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
10._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
11._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
12._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
13._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
14._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
15._NA	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG
16._GC-08-036-1-47	AT	AC	AA	AA	CG	CC	CC	CT	AA	TT	AG	AT	AA	CG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
1._GC-08-036-1-47	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
2._GC-08-036-1-47	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
3._GC-08-036-1-47	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
4._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
5._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
6._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
7._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
8._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
9._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
10._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
11._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
12._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
13._GC-08-036-1-47	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
14._GC-08-036-1-47	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
15._NA	CG	AA	TT	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA
16._GC-08-036-1-47	CG	AA	_	GT	AG	CC	CC	AG	GT	GT	TT	GG	CT	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
1._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
2._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
3._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
4._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
5._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
6._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
7._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
8._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
9._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
10._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
11._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
12._NA	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
13._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	_	CC	AC	AG	AG	GT	TT	CT
14._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT
15._NA	CC	GG	TT	CT	AG	_	AA	CC	AC	AG	AG	GT	TT	CT
16._GC-08-036-1-47	CC	GG	TT	CT	AG	AG	AA	CC	AC	AG	AG	GT	TT	CT

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
1._GC-08-036-1-47	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
2._GC-08-036-1-47	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
3._GC-08-036-1-47	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
4._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
5._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
6._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
7._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
8._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
9._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
10._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
11._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
12._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
13._GC-08-036-1-47	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
14._GC-08-036-1-47	_	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
15._NA	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG
16._GC-08-036-1-47	CT	TT	AG	CC	CT	CT	AC	CG	AG	AC	AG	TT	GT	GG

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
_Input profile	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
1._GC-08-036-1-47	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
2._GC-08-036-1-47	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
3._GC-08-036-1-47	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
4._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
5._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
6._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
7._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
8._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
9._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
10._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
11._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
12._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
13._GC-08-036-1-47	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
14._GC-08-036-1-47	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
15._NA	TT	CC	GG	TT	AC	AA	CC	AA	AA	CC	CG	CC	AT	AC
16._GC-08-036-1-47	TT	CC	GG	TT	AC	AG	CC	AA	AA	CC	CG	CC	AT	AC

	85	86	87	88	89	90	91	92	93	94	95
_Input profile	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
1._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
2._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
3._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
4._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
5._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
6._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
7._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
8._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
9._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
10._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
11._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
12._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
13._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
14._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
15._NA	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X
16._GC-08-036-1-47	CT	CT	CT	CT	AG	CT	CT	GT	CT	AT	GG	X_X	X_X	X_X

Input profile: CEPEC_44 GC-08-036-1-47

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

1._CEPEC_44 GC-08-036-1-47

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

2._CEPEC_44 GC-08-036-1-47

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

3._CEPEC_44 GC-08-036-1-47

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

4._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

Mars, 2018

5._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

6._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

7._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

8._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

Mars, 2018

9._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

10._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

11._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

12._CEPEC_44 NA

identical
95 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

13._CEPEC_44 GC-08-036-1-47

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

14._CEPEC_44 GC-08-036-1-47

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

15._CEPEC_44 NA

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

16._CEPEC_44 GC-08-036-1-47

99.5 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

Mars, 2018

Key to SNP Markers

1	TcSNP1075	2	TcSNP1350	3	TcSNP534	4	TcSNP591	5	TcSNP42
6	TcSNP418	7	TcSNP702	8	TcSNP1096	9	TcSNP1060	10	TcSNP1165
11	TcSNP429	12	TcSNP75	13	TcSNP891	14	TcSNP122	15	TcSNP316
16	TcSNP521	17	TcSNP860	18	TcSNP1062	19	TcSNP836	20	TcSNP878
21	TcSNP929	22	TcSNP413	23	TcSNP653	24	TcSNP1149	25	TcSNP174
26	TcSNP32	27	TcSNP372	28	TcSNP448	29	TcSNP872	30	TcSNP953
31	TcSNP1034	32	TcSNP1175	33	TcSNP1111	34	TcSNP577	35	TcSNP90
36	TcSNP998	37	TcSNP150	38	TcSNP28	39	TcSNP751	40	TcSNP1484
41	TcSNP602	42	TcSNP561	43	TcSNP894	44	TcSNP1063	45	TcSNP1126
46	TcSNP1270	47	TcSNP606	48	TcSNP329	49	TcSNP689	50	TcSNP944
51	TcSNP1242	52	TcSNP1383	53	TcSNP547	54	TcSNP776	55	TcSNP1309
56	TcSNP151	57	TcSNP1520	58	TcSNP799	59	TcSNP899	60	TcSNP226
61	TcSNP1439	62	TcSNP1442	63	TcSNP193	64	TcSNP25	65	TcSNP364
66	TcSNP144	67	TcSNP230	68	TcSNP560	69	TcSNP723	70	TcSNP731
71	TcSNP701	72	TcSNP1041	73	TcSNP645	74	TcSNP917	75	Tcm003s01336581
76	Tcm003s07402719	77	Tcm001s00947643	78	Tcm006s26664133	79	Tcm002s20575712	80	TcSNP529
81	TcSNP1458	82	TcSNP60	83	TcSNP430	84	TcSNP823	85	TcSNP619
86	TcSNP994	87	TcSNP1144	88	TcSNP1156	89	TcSNP469	90	TcSNP999
91	TcSNP242	92	TcSNP1253	93	TcSNP1414	94	TcSNP154	95	TcSNP240

SNP Profiles of CEPEC-44 View Data

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Input profile: CEPEC_44 GC-08-036-1-47

1._CEPEC_44 GC-08-036-1-47

identical 95 shared markers

2._CEPEC_44 GC-08-036-1-47

identical 95 shared markers

3._CEPEC_44 GC-08-036-1-47

identical 95 shared markers

4._CEPEC_44 NA

identical 95 shared markers

5._CEPEC_44 NA

identical 95 shared markers

6._CEPEC_44 NA

identical 95 shared markers

7._CEPEC_44 NA

identical 95 shared markers

8._CEPEC_44 NA

identical 95 shared markers

9._CEPEC_44 NA

identical 95 shared markers

10._CEPEC_44 NA

identical 95 shared markers

11._CEPEC_44 NA

identical 95 shared markers

12._CEPEC_44 NA

identical 95 shared markers

13._CEPEC_44 GC-08-036-1-47

identical 94 shared markers

14._CEPEC_44 GC-08-036-1-47

identical 94 shared markers

15._CEPEC_44 NA

identical 94 shared markers

16._CEPEC_44 GC-08-036-1-47

99.5 % 94 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
95 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

99.5 %
94 shared markers