SNP Profiles of CEPEC-42   View Data

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 Key

 1234567891011121314
_Input profile
AAAACTACGGGGCCCCCTCCGGTTCTTT
1._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
2._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
3._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
4._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
5._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
6._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
7._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
8._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
9._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
10._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
11._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
12._GC-01-065-4-01
AA_CTACGGGGCCCCCTCCGGTTCTTT
 1516171819202122232425262728
_Input profile
ATACAAAAGGCCGGCTAATTGGATAACC
1._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
2._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
3._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
4._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
5._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
6._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
7._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
8._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
9._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
10._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
11._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
12._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
 2930313233343536373839404142
_Input profile
CGATTTGTAGGGCCAGGTGGTTAGCTAG
1._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
2._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
3._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
4._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
5._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
6._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
7._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
8._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
9._GC-01-065-4-01
CGATTTGTAGGGCC_GTGGTTAGCTAG
10._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
11._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
12._GC-01-065-4-01
CGATTTGTAGGGCCAGGTGGTTAGCTAG
 4344454647484950515253545556
_Input profile
CGGGTTCTAGAGAACCCCGGAGGGTTCT
1._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
2._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
3._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
4._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
5._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
6._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
7._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
8._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
9._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
10._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
11._GC-01-065-4-01
CG_TTCTAGAGAACCCCGGAGGGTTCT
12._GC-01-065-4-01
CGGGTTCTAGAGAACCCCGGAGGGTTCT
 5758596061626364656667686970
_Input profile
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
1._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
2._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
3._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
4._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
5._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
6._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
7._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
8._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
9._GC-01-065-4-01
CT_AGCCCTTTAAGGGGAAAAGTGGAG
10._GC-01-065-4-01
CTTTAGCCCTTTAA_GGAAAAGTGGAG
11._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
12._GC-01-065-4-01
CTTTAGCCCTTTAAGGGGAAAAGTGGAG
 7172737475767778798081828384
_Input profile
TTCCAGCTCCAACCACAACCCGCCATAC
1._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
2._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
3._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
4._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
5._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
6._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
7._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
8._GC-01-065-4-01
TT_AGCTCCAACCACAACCCGCCATAC
9._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
10._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
11._GC-01-065-4-01
TTCCAGCTCCAACCACAACCCGCCATAC
12._GC-01-065-4-01
TT_AGCTCCAACCACAACCCGCCATAC
 8586878889909192939495   
_Input profile
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
1._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
2._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
3._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
4._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
5._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
6._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
7._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
8._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
9._GC-01-065-4-01
TTCTCTCTAACCCTTTCTATAGX_XX_XX_X
10._GC-01-065-4-01
TTCTCTCTAACCCTTTCT__X_XX_XX_X
11._GC-01-065-4-01
TTCTCTCTAACCCTTTCT__X_XX_XX_X
12._GC-01-065-4-01
TTCTCTCTAACCCTTTCT__X_XX_XX_X

Input profile: CEPEC_42 GC-01-065-4-01

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

4._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

5._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

6._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

7._CEPEC_42 GC-01-065-4-01

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

8._CEPEC_42 GC-01-065-4-01

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._CEPEC_42 GC-01-065-4-01

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL1
Notes: PL1 FP2
 Mars, 2018

11._CEPEC_42 GC-01-065-4-01

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL15
Notes: PL15 FP3
 Mars, 2018

12._CEPEC_42 GC-01-065-4-01

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL6
Notes: PL6 FP2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240