SNP Profiles of CEPEC-42   View Data

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 Key

 1234567891011121314
_Input profile
AAAACTACGGGGCCCCCTCCGGTTCTTT
1._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
2._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
3._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
4._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
5._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
6._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
7._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
8._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
9._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
10._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
11._GC-01-065-4-01
AAAACTACGGGGCCCCCTCCGGTTCTTT
12._GC-01-065-4-01
AA_CTACGGGGCCCCCTCCGGTTCTTT
 1516171819202122232425262728
_Input profile
ATACAAAAGGCCGGCTAATTGGATAACC
1._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
2._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
3._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
4._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
5._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
6._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
7._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
8._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
9._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
10._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
11._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
12._GC-01-065-4-01
ATACAAAAGGCCGGCTAATTGGATAACC
 2930313233343536373839404142
_Input profile
CGATTTGTAGGGCCGTGGTTAGCTAGCG
1._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
2._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
3._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
4._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
5._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
6._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
7._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
8._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
9._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
10._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
11._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
12._GC-01-065-4-01
CGATTTGTAGGGCCGTGGTTAGCTAGCG
 4344454647484950515253545556
_Input profile
GGTTCTAGAGAACCCCGGAGGGTTCTCT
1._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
2._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
3._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
4._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
5._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
6._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
7._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
8._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
9._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
10._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
11._GC-01-065-4-01
_TTCTAGAGAACCCCGGAGGGTTCTCT
12._GC-01-065-4-01
GGTTCTAGAGAACCCCGGAGGGTTCTCT
 5758596061626364656667686970
_Input profile
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
1._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
2._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
3._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
4._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
5._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
6._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
7._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
8._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
9._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTT_
10._GC-01-065-4-01
AGCCCTTTAA_GGAAAAGTGGAGTTCC
11._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTTCC
12._GC-01-065-4-01
AGCCCTTTAAGGGGAAAAGTGGAGTT_
 7172737475767778798081828384
_Input profile
AGCTCCAACCACAACCCGCCATACTTCT
1._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
2._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
3._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
4._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
5._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
6._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
7._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
8._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
9._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
10._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
11._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
12._GC-01-065-4-01
AGCTCCAACCACAACCCGCCATACTTCT
 858687888990919293     
_Input profile
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
1._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
2._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
3._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
4._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
5._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
6._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
7._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
8._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
9._GC-01-065-4-01
CTCTAACCCTTTCTATAGX_XX_XX_XX_XX_X
10._GC-01-065-4-01
CTCTAACCCTTTCT__X_XX_XX_XX_XX_X
11._GC-01-065-4-01
CTCTAACCCTTTCT__X_XX_XX_XX_XX_X
12._GC-01-065-4-01
CTCTAACCCTTTCT__X_XX_XX_XX_XX_X

Input profile: CEPEC_42 GC-01-065-4-01

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

4._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

6._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

7._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

8._CEPEC_42 GC-01-065-4-01

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

9._CEPEC_42 GC-01-065-4-01

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._CEPEC_42 GC-01-065-4-01

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL1
Notes: PL1 FP2
 Mars, 2018

11._CEPEC_42 GC-01-065-4-01

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL15
Notes: PL15 FP3
 Mars, 2018

12._CEPEC_42 GC-01-065-4-01

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 1, Tree: PL6
Notes: PL6 FP2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240