Genomic/Transcriptomic Data  

Claudia Garcia, Alex-Alan Furtado de Almeida, Marcio Costa, Dahyana Britto, Fabio Correa, Pedro Mangabeira, Lidiane Silva, Jose Silva, Stefan Royaert & Jean-Philippe Marelli (2022) Single-base resolution methylomes of somatic embryogenesis in Theobroma cacao L. reveal epigenome modifications associated with somatic embryo abnormalities. Scientific Reports 12:15097

SampleNameClone nameData typeRunExperimentBioSampleSampleSourceNotes
TC41_CpGCCN 10 x CCN 51genomicSRR20075024  NCBI ENASRX16112995SAMN29628478BRAALMZygotic Embryo
TC51_CpGCCN 51genomicSRR20075023  NCBI ENASRX16112996SAMN29628480BRAALMNormal Somatic Embryo
TC61_CpGCCN 10genomicSRR20075022  NCBI ENASRX16112997SAMN29628482BRAALMAbnormal Somatic Embryo