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SC 5 [COL]    Theobroma cacao

 Hunter, J.R. (1961)
The status of cacao variety improvement work in the Western Hemisphere. Cacao (Costa Rica) 4: pp. 1-16.

Derivation: Seleccion Colombiana.
Location: Palmira, Valle, Colombia.

Notes:  Doak & Zambrano, 1961 [DOA61A] Collected in 1961.

Bartley, 1993a [BAR93A]. May be the same as MIRANDA in Soria, 1970a [SOR70A].

In previous versions of the ICGD the SPA [COL] clones were included as synonyms of the group SC [COL] (SC 57 - 76 inclusive). The synonymy has now been reversed as this material was originally described as SPA and is more widely known under this name, as advised by Dr. Bartley.


 

Synonyms: SCP 5 [COL], SCS 5 [COL]

Location: Palmira, Valle del Cauca, Colombia
Coordinates: 76.50 W, 3.50 N
   Marita, J. M. et al., 2001

 GENOME/TRANSCRIPTOME DATA LINKS

 Jaime A Osorio-Guarín et al., 2020
 Reference
BioProject: PRJNA734904   NCBI   ENA FASTQ 
Library Source: Genomic
 
Run: SRR14743816   NCBI   ENA FASTQ 
Experiment: SRX11078306
BioSample: SAMN19549216
SampleName: SC5
SampleSource: AGROSAVIA, Colombia

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List received in 2012   Reference
• Accession: 215
   - Local Name: SC 5
   - Year of Accession: 1980
List received in 1987   Reference
• Accession: 187
   - Local Name: SC 5 [COL]
   - Year of Accession: 1967
List received in 1989   Reference
• Local Name: SC 5 [COL]
List received in 2012   Reference
• Local Name: SC - 5
List received in 2011   Reference
• Local Name: SC 5 [COL]
   - Year of Accession: 1994

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Susceptible, 80.00 % Infection
Note: External Severety = 3.8 and Internal Severety = 4.6
 Phillips, W., 1996
Susceptible, 80.00 % Infection
Note: External Severety = 3.0 and Internal Severety = 3.9
 Phillips, W., 1997
Moderate Resistance, sp. P. palmivora (Pod).
Note: Unripe, Attached and not wounded
 Morera, J., 1993
Moderately Susceptible, sp. P. palmivora (Pod).
 Phillips, W., 1997
Resistant (Seedling).
 Luz, E.D.M.N. & Silva, S.D.V.M., 1997
Susceptible (Field Reaction).
 Luz, E.D.M.N. & Silva, S.D.V.M., 1997

Pod Index: 18.9 (pods per kg dried beans)
 Reference
Seed Index: 72.9 (dried beans per 100g)
Productivity: high - very high
 Reference

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Colour: dark purple
Shape: oblong
Number: 35.0
Total Wet Weight: 77.9 g
Cotyledon Dry Weight: 1.51 g
Cotyledon Length: 24.8 mm
Cotyledon Width: 14.0 mm
 Reference
Colour Dark Purple: Present
Colour Light Purple: Present
Colour Grey: Present
Colour White: Absent
Colour Mottled: Present
Number: 26.8
Maximum Number: 40
Cotyledon Wet Weight: 2.14 g
Cotyledon Dry Weight: 1.37 g
Cotyledon Length: 24.8 mm
Cotyledon Width: 13.3 mm
Cotyledon Thickness: 9.9 mm
 Reference
Colour Purple: 65 %
Colour Light Purple: 32 %
Colour White: 2 %
Colour Mottled: 1 %
Shape: round
Length: 24.6 mm
Width: 14.4 mm
Thickness: 10.9 mm
Cotyledon Wet Weight: 2.34 g
Cotyledon Dry Weight: 1.43 g
 Reference
Colour Purple: 69 %
Colour Light Purple: 22 %
Colour White: 9 %
Size: medium
Number: 29.2
Length: 23.5 mm
Width: 13.8 mm
Thickness: 10.5 mm
Total Wet Weight: 102.1 g
Wet Weight: 2.63 g
Cotyledon Wet Weight: 2.36 g
Cotyledon Dry Weight: 1.60 g
 Reference
Colour Dark Purple: 65 %
Colour Light Purple: 32 %
Colour White: 2 %
Colour Mottled: 1 %
Cotyledon Wet Weight: 2.34 g
Cotyledon Dry Weight: 1.43 g
Cotyledon Length: 24.6 mm
Cotyledon Width: 14.4 mm
Cotyledon Thickness: 10.9 mm
 Reference

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Testa: 4.50 %
 Reference
Butterfat Content: 50.36 %
Testa: 8.74 %
 Reference
Testa: 5.01 %
 Reference

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Shape: elliptical
Basal Constriction: moderate
Apex Form: acute
Rugosity: slight
Length: 188.0 mm
Breadth: 89.0 mm
Colour: slight anthocyanin
 Reference
Rugosity: intense
 Reference
Basal Constriction: absent
Apex Form: slightly acute
Rugosity: slight - moderate
Husk Thickness: 11.15 mm (13.9 - 8.4)
Length: 191.0 mm
Breadth: 84.0 mm
Colour: negligible - slight / absent anthocyanin (ridge/furrow)
Weight: 599.0 g
Pods Per Tree: 8
Hardness: soft
Length Breadth Ratio: 2.27
Note: ratio of distances between ridges within a pair and between ridges of two different pairs = 0.83
 Reference
Shape: angoleta
Husk Thickness: 17.3 mm
Length: 186.0 mm
Breadth: 89.0 mm
Colour: red / yellow (ridge/furrow)
Hardness: soft
Length Breadth Ratio: 2.08
 Reference
Shape: orbicular
Basal Constriction: moderate - slight
Apex Form: acute
Rugosity: moderate
Husk Thickness: 0.70 mm
Length: 204.8 mm
Breadth: 101.6 mm
Colour: dark red
Weight: 786.0 g
Hardness: moderate
Length Breadth Ratio: 2.02
 Reference
Shape: angoleta
Rugosity: intense
Husk Thickness: 17.3 mm
Length: 186.0 mm
Breadth: 89.0 mm
Colour: light red
Hardness: moderate
Length Breadth Ratio: 2.08
 Reference
Shape: angoleta
Colour: red
 Reference

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Colour: moderate anthocyanin
 Reference
Colour: reddish brown
 Reference
Colour: intense anthocyanin
 Reference
Colour: yellow
 Reference

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Length to Width Ratio: 2.78
Basal Angle: 151.0 °
Apical Angle: 86.0 °
 Reference
Shape: obovate
Length: 297.0 mm
Width: 100.1 mm
Length to Width Ratio: 2.96
Apex Form: acuminate
Pulvinus Present: Yes
 Reference
Basal Angle: 151.0 °
Apical Angle: 86.0 °
 Reference

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Ligule Colour: slight anthocyanin
Stamen Colour: anthocyanin absent
Sepal Length: 8.71 mm
Ligule Width: 2.78 mm
Ovule Number: 43
Style Length: 2.40 mm
Pedicel Colour: red
 Reference
Self Compatibility: self compatible
 Reference
Ligule Colour: slight anthocyanin (apical)
Stamen Colour: anthocyanin absent
Sepal Colour: greyish green
Sepal Width: 2.14 mm
Sepal Length: 8.40 mm
Ligule Length: 7.14 mm
Ligule Width: 2.64 mm
Ovary Colour: slight anthocyanin (apical)
Ovary Width: 0.97 mm
Ovary Length: 1.12 mm
Style Length: 2.08 mm
Staminode Length: 7.05 mm
Pedicel Colour: pastel red
Self Compatibility: self compatible
Note: Translation of Methuen colour codes.
 Reference
Bud Colour: intense anthocyanin
Ligule Colour: slight anthocyanin
Stamen Colour: anthocyanin absent
Guide Line Length: 3.50 mm
Sepal Colour: intense anthocyanin
Sepal Width: 2.20 mm
Sepal Length: 7.70 mm
Sepal Length to Width Ratio: 3.50
Ligule Length: 3.30 mm
Ligule Width: 2.70 mm
Ligule Length to Width Ratio: 1.23
Ribbon Length: 3.70 mm
Ribbon Colour: slight anthocyanin
Ovary Colour: moderate anthocyanin (apical), slight anthocyanin (basal)
Ovary Width: 1.00 mm
Ovary Length: 1.40 mm
Ovary Length to Width Ratio: 1.37
Ovule Number: 43
Style Colour: anthocyanin absent (apical), anthocyanin absent (basal)
Style Length: 1.90 mm
Staminode Colour: intense anthocyanin
Staminode Length: 7.50 mm
Pedicel Length: 14.90 mm
Pedicel Colour: intense anthocyanin, intense anthocyanin (ab), slight anthocyanin (basal)
Hairs on Upper Surface of Sepal: present
Pigmented Glands on Lower Surface of Sepal: present
Horns at Base of Guide Lines: absent
Pigmented Spot on Pollen Sac: absent
 Reference
Ligule Colour: anthocyanin absent
Petal Length: 11.30 mm
Sepal Colour: intense anthocyanin
Sepal Width: 2.26 mm
Sepal Length: 8.62 mm
Sepal Length to Width Ratio: 3.80
Ligule Length: 3.08 mm
Ligule Width: 3.00 mm
Ligule Length to Width Ratio: 1.02
Ribbon Length: 3.73 mm
Ovary Width: 1.00 mm
Ovary Length: 1.16 mm
Ovary Length to Width Ratio: 1.16
Ovule Number: 38
Style Length: 1.30 mm
Staminode Colour: purplish red
Staminode Length: 7.66 mm
Pedicel Length: 15.20 mm
Pedicel Colour: vivid red
Hairs on Upper Surface of Sepal: present
Pigmented Glands on Lower Surface of Sepal: present
Self Compatibility: self compatible
Note: Translation of Pantone colour codes.
 Reference
Bud Colour: yellow
Ligule Colour: white
Stamen Colour: anthocyanin absent
Guide Line Length: 3.50 mm
Sepal Colour: yellow
Sepal Width: 2.20 mm
Sepal Length: 7.70 mm
Ligule Length: 3.30 mm
Ligule Width: 2.70 mm
Ribbon Length: 3.70 mm
Ribbon Colour: green
Ovary Width: 1.00 mm
Ovary Length: 1.40 mm
Ovule Number: 43
Style Colour: green - white (apical), green (basal)
Style Length: 1.90 mm
Staminode Colour: yellow
Staminode Length: 7.50 mm
Pedicel Length: 14.90 mm
Pedicel Colour: yellow, yellow (ab), green (basal)
Hairs on Upper Surface of Sepal: present
Pigmented Glands on Lower Surface of Sepal: present
Horns at Base of Guide Lines: absent
 Reference

Hunter, J.R. (1961) The status of cacao variety improvement work in the Western Hemisphere. Cacao (Costa Rica) 4: pp. 1-16.
Marita, J. M., Nienhuis, J., Pires, J. L. & Aitken, W. M. (2001) Analysis of Genetic Diversity in Theobroma cacao with Emphasis on Witches’ Broom Disease Resistance. Crop Sci. 41:1305–1316.
Jaime A Osorio-Guarín, Jhon A Berdugo-Cely, Roberto A Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng (2020) Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.). G3 Genes|Genomes|Genetics, Volume 10, Issue 5, Pages 1713–1725
CEPEC (2012) Accession list for the CEPEC (Bahia, Brazil) collection. Dr. José Luis Pires, personal communication, February 2012.
Almeida, C.M.V.C. de, Barriga, J.P., Machado, P.F.R. & Bartley, B.G.D. (1987) Evolucao do programa de conservacao dos recursos geneticos de cacau na Amazonia Brasileira. CEPLAC/DEPEA, Boletim Tecnico, Belem, Brasil 5: pp.108.
Colombia - ICA Palmira (1989) ? A catalogue of the cacao germplasm at ICA Palmira. F. Ocampo Rojas, ICA Palmira, Colombia.
EET - Pichilingue (2012) Accessions planted in EET - Pichilingue, Ecuador. Freddy Amores and Ignacio Sotomayor C, personal communication, February 2012.
CRU (2011) ICG,T accessions. CRU website.
Phillips, W. (1996) Cocoa cultivar reaction when innoculated with Moniliophthora roreri. Unpublished data supplied by W. Phillips, CATIE, Costa Rica. Personal communication
Phillips, W. (1997) Results of the artificial inoculation of Moniliophthora rorei using the Aspersion method. Unpublished data supplied by W. Phillips, CATIE, Costa Rica. Personal communication
Morera, J. (1993) Reaction of clones to Phytophthora palmivora. J. Morera, CATIE, Costa Rica. Personal Communication.
Phillips, W. (1997) Results of the artificial inoculation of Phytophthora palmivora using the Paper Disc method. Unpublished data supplied by W. Phillips, CATIE, Costa Rica. Personal communication
Luz, E.D.M.N. & Silva, S.D.V.M. (1997) Evaluating resistance/tolerance to Witches' Broom disease in Bahia, Brazil. Final Report to ACRI. CEPLAC/CEPEC, February, 1997. pp. 56. Data supplied to ICGD by Luz & Silva.
Frances Bekele & Gillian Bidaisee (2022) Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Costa Rica - CATIE (1981) Genetic Resources of Cacao. A Catalogue of the CATIE Collection. J.M.M. Engels, Tropical Agricultural Research and Training Centre, CATIE, Turrialba, Costa Rica. Technical Bulletin No. 7: pp. 191.
Enriquez, G.A. & Soria, V.J. (1967) Cacao Cultivars Register. IICA Teaching and Research Centre, Costa Rica
Colombia - ICA Palmira (1986) ? A catalogue of the cacao germplasm at ICA Palmira. ICA Palmira, Colombia.
Morera, J. & Mora, A. (1990) Banco de Germoplasma de Cacao del CATIE. Information supplied on computer diskette by CATIE, Turrialba, Costa Rica.
Trinidad - CRU (1998) Fat Analysis Data. Data supplied on computer diskette by F. Bekele, CRU, Trinidad.
Brazil - CEPEC (1987) List of clones in the CEPEC, Bahia, Brazil collection. Computer printout from CEPEC. Supplied by B.G.D. Bartley, CEPEC, Brazil.
Morera, J., Paredes, A. & Mora, A. (1991) Germoplasma de cacao en el CATIE entre 1947 y 1991, Programa II: Generacion y transferencia de tecnologia. IICA, San Jose, Costa Rica, pp. 49.