SNP Profiles matching PA 56 [PER]

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AAACCTCCGGGGCCCCCCCCGGTTCCTT
1._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
2._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
3._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
4._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
5._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
6._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
7._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
8._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
9._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
10._RUQ_32
AAACCTCC________CCCCGG__CC__
11._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
12._RUQ_32
____CTCC____CT__CC____TTCC__
13._NA
AAACCTACGGGGCCCCCCCCGGTTCCTT
14._NA
AAACCTACGGGGCCCCCCCCGGTTCCTT
15._NA
AAACCTACGGGGCCCCCCCCGGTTCCTT
16._NA
AAACCTACGGGGCCCCCCCCGGTTCCTT
17._RUQ_37
____CTAC____CT__CC____TTCC__
18._PA_175_[PER]
AAACCTAC________CCCCGG__CC__
19._PA_175_[PER]
AAACCTAC________CCCCGG__CC__
20._PA_175_[PER]
AAACCTAC________CCCCGG__CC__
21._PA_175_[PER]
AAACCTAC________CCCCGG__CC__
22._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
23._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
24._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
25._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
26._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
27._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
28._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
29._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
30._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
31._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
32._RUQ_1569
____CTCC____CT__CC____TTCC__
33._RUQ_1436
____CCCC____TT__CC____TTCC__
34._RUQ_1564
____CTCC____CT__CC____TTCC__
35._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
36._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
37._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
38._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
39._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
40._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
41._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
42._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
43._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
44._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
45._MO_9
AAACCTCC________CCCCGG__CC__
46._MO_9
AAACCTCC________CCCCGG__CC__
47._MO_9
AAACCTCC________CCCCGG__CC__
48._MO_9
AAACCTCC________CCCCGG__CC__
49._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
 1516171819202122232425262728
_Input profile
AACCGGCGCCGGCCAATTGGAAAACCGG
1._NA
AACCGGCGCCGGCCAATTGGAAAACCGG
2._NA
AACCGGCGCCGGCCAATTGGAAAACCGG
3._NA
AACCGGCGCCGGCCAATTGGAAAACCGG
4._NA
AACCGGCGCCGGCCAATTGGAA__CCGG
5._PA_56_[PER]
____GG____GG________AAAA__GG
6._PA_56_[PER]
____GG____GG________AAAA__GG
7._PA_56_[PER]
____GG____GG________AAAA__GG
8._PA_56_[PER]
____GG____GG________AAAA__GG
9._PA_56_[PER]
____GG____GG________AA____GG
10._RUQ_32
____GG____GG________AAAA__GG
11._PA_56_[PER]
____GG____GG________AAAA__GG
12._RUQ_32
________CC________GG__AACCGG
13._NA
AACCAGCGCCCGCTAATTGGATAACCGG
14._NA
AACCAGCGCCCGCTAATTGGATAACCGG
15._NA
AACCAGCGCCCGCTAATTGGATAACCGG
16._NA
AACCAGCGCCCGCTAATTGGATAACCGG
17._RUQ_37
________CC________GG__AACCGG
18._PA_175_[PER]
____AG____CG________ATAA__GG
19._PA_175_[PER]
____AG____CG________ATAA__GG
20._PA_175_[PER]
____AG____CG________ATAA__GG
21._PA_175_[PER]
____AG____CG________ATAA__GG
22._PA_72_[PER]
____GG____GG________AAAA__GG
23._PA_72_[PER]
____GG____GG________AAAA__GG
24._PA_72_[PER]
____GG____GG________AAAA__GG
25._PA_72_[PER]
____GG____GG________AAAA__GG
26._PA_72_[PER]
____GG____GG________AAAA__GG
27._PA_72_[PER]
____GG____GG________AAAA__GG
28._PA_72_[PER]
____GG____GG________AAAA__GG
29._PA_72_[PER]
____GG____GG________AAAA__GG
30._PA_72_[PER]
____GG____GG________AAAA__GG
31._PA_72_[PER]
____GG____GG________AAAA__GG
32._RUQ_1569
________CC________GG__AACCGG
33._RUQ_1436
________CC________GG__AACCGG
34._RUQ_1564
________CC________GG__AACCGG
35._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
36._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
37._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
38._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
39._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
40._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
41._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
42._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
43._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
44._GC-08-051-1-62
AACCGGGGCCGGCTAATTGGAAAACCGG
45._MO_9
____GG____CG________AAAA__GG
46._MO_9
____GG____CG________AAAA__GG
47._MO_9
____GG____CG________AAAA__GG
48._MO_9
____GG____CG________AAAA__GG
49._PA_72_[PER]
____GG____GG________AAAA__GG
 2930313233343536373839404142
_Input profile
AATTGTGGCGCCAGGGGGTTGGTTAGCC
1._NA
AATTGTGGCGCCAGGGGGTTGGTTAGCC
2._NA
AATTGTGGCGCCAGGGGGTTGGTTAGCC
3._NA
AATTGTGGCGCCAGGGGGTTGGTTAGCC
4._NA
AATTGTGGCGCCAGGGGGTTGGTTAGCC
5._PA_56_[PER]
AA______CG__AGGG____GG______
6._PA_56_[PER]
AA______CG__AGGG____GG______
7._PA_56_[PER]
AA______CG__AGGG____GG______
8._PA_56_[PER]
AA______CG__AGGG____GG______
9._PA_56_[PER]
AA______CG__AGGG____GG______
10._RUQ_32
AA______CG__AGGG____GG______
11._PA_56_[PER]
AA______CG__AGGG____GG______
12._RUQ_32
______GGCGCCAGGG____GGTT____
13._NA
AATTGTGGCGCCAAGGGGTTGGTTGGCC
14._NA
AATTGTGGCGCCAAGGGGTTGGTTGGCC
15._NA
AATTGTGGCGCCAAGGGGTTGGTTGGCC
16._NA
AATTGTGGCGCCAAGG__TTGGTTGGCC
17._RUQ_37
______GGCGCCAAGG____GGTT____
18._PA_175_[PER]
AA______CG__AAGG____GG______
19._PA_175_[PER]
AA______CG__AAGG____GG______
20._PA_175_[PER]
AA______CG__AAGG____GG______
21._PA_175_[PER]
AA______CG__AAGG____GG______
22._PA_72_[PER]
AA______CG__AGGT____AG______
23._PA_72_[PER]
AA______CG__AGGT____AG______
24._PA_72_[PER]
AA______CG__AGGT____AG______
25._PA_72_[PER]
AA______CG__AGGT____AG______
26._PA_72_[PER]
AA______CG__AGGT____AG______
27._PA_72_[PER]
AA______CG__AGGT____AG______
28._PA_72_[PER]
AA______CG__AGGT____AG______
29._PA_72_[PER]
AA______CG__AGGT____AG______
30._PA_72_[PER]
AA______CG__AGGT____AG______
31._PA_72_[PER]
AA______CG__AGGT____AG______
32._RUQ_1569
______GGCGCCAGGG____AGTT____
33._RUQ_1436
______GGCGCCAGGG____GGCT____
34._RUQ_1564
______GGCGCCAGGG____AGTT____
35._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
36._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
37._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
38._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
39._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
40._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
41._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
42._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
43._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
44._GC-08-051-1-62
AATTTTGGCGCCAGGTGGGTAGTTAGCC
45._MO_9
AA______GG__AGGT____GG______
46._MO_9
AA______GG__AGGT____GG______
47._MO_9
AA______GG__AGGT____GG______
48._MO_9
AA______GG__AGGT____GG______
49._PA_72_[PER]
AA______CG__AGGT____AG______
 4344454647484950515253545556
_Input profile
GGTTCCAAGGAACCCCGGAGGGTTCCCC
1._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
2._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
3._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
4._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
5._PA_56_[PER]
____CC__________________CCCC
6._PA_56_[PER]
____CC__________________CCCC
7._PA_56_[PER]
____CC__________________CCCC
8._PA_56_[PER]
____CC__________________CCCC
9._PA_56_[PER]
____CC__________________CCCC
10._RUQ_32
____CC__________________CCCC
11._PA_56_[PER]
____CC__________________CCCC
12._RUQ_32
GGTT____GG____________CTCC__
13._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
14._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
15._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
16._NA
GGTTCCAAGGAACCCCGGAGGGTTCCCC
17._RUQ_37
GGTT____GG____________CTCC__
18._PA_175_[PER]
____CC__________________CCCC
19._PA_175_[PER]
____CC__________________CCCC
20._PA_175_[PER]
____CC__________________CCCC
21._PA_175_[PER]
____CC__________________CCCC
22._PA_72_[PER]
____CC__________________CCCT
23._PA_72_[PER]
____CC__________________CCCT
24._PA_72_[PER]
____CC__________________CCCT
25._PA_72_[PER]
____CC__________________CCCT
26._PA_72_[PER]
____CC__________________CCCT
27._PA_72_[PER]
____CC__________________CCCT
28._PA_72_[PER]
____CC__________________CCCT
29._PA_72_[PER]
____CC__________________CCCT
30._PA_72_[PER]
____CC__________________CCCT
31._PA_72_[PER]
____CC__________________CCCT
32._RUQ_1569
GGTT____GG____________CTCC__
33._RUQ_1436
GGTT____GG____________TTCC__
34._RUQ_1564
GGTT____GG____________CTCC__
35._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
36._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
37._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
38._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
39._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
40._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
41._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
42._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
43._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
44._GC-08-051-1-62
GGTTCCAAGGAACCCCGGAAGG__CCCT
45._MO_9
____CC__________________CCCC
46._MO_9
____CC__________________CCCC
47._MO_9
____CC__________________CCCC
48._MO_9
____CC__________________CCCC
49._PA_72_[PER]
____CC__________________CCCT
 5758596061626364656667686970
_Input profile
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
1._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
2._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
3._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
4._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
5._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
6._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
7._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
8._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
9._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
10._RUQ_32
____CC__CTACGG__CCAGGTGG____
11._PA_56_[PER]
____CC__CTACGG__CCAGGTGG____
12._RUQ_32
TT__CCCCCTAC__GGCCAGGTGGAG__
13._NA
TTAGCCCTCTAAGGGGCCGGGTGGAGCT
14._NA
TTAGCCCTCTAAGGGGCCGGGTGGAGCT
15._NA
TTAGCCCTCTAAGGGGCCGGGTGGAGCT
16._NA
TTAGCCCTCTAAGGGGCCGGGTGGAGCT
17._RUQ_37
TT__CCCTCTAA__GGCCGGGTGGAG__
18._PA_175_[PER]
____CC__CTAAGG__CCGGGTGG____
19._PA_175_[PER]
____CC__CTAAGG__CCGGGTGG____
20._PA_175_[PER]
____CC__CTAAGG__CCGGGTGG____
21._PA_175_[PER]
____CC__CTAAGG__CCGGGTGG____
22._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
23._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
24._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
25._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
26._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
27._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
28._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
29._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
30._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
31._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
32._RUQ_1569
TT__CCCTCCAA__GGACAGGTGGGG__
33._RUQ_1436
TT__CCCCCCAC__GGCCAGGTGGAG__
34._RUQ_1564
TT__CCCTCCAA__GGACAGGTGGGG__
35._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
36._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
37._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
38._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
39._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
40._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
41._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
42._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
43._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
44._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
45._MO_9
____CC__CTAAGG__ACAAGTGG____
46._MO_9
____CC__CTAAGG__ACAAGTGG____
47._MO_9
____CC__CTAAGG__ACAAGTGG____
48._MO_9
____CC__CTAAGG__ACAAGTGG____
49._PA_72_[PER]
____CC__CTACGG__ACAGGTGG____
 7172737475767778798081828384
_Input profile
CCGGCTACAGACAAAGACCGCCATAATT
1._NA
CCGGCTACAGACAAAGACCGCCATAATT
2._NA
CCGGCTACAGACAAAGACCGCCATAATT
3._NA
CCGGCTACAGACAAAGACCGCCATAATT
4._NA
CCGGCTACAGACAAAGACCGCCATAATT
5._PA_56_[PER]
__GGCT__________ACCG______TT
6._PA_56_[PER]
__GGCT__________ACCG______TT
7._PA_56_[PER]
__GGCT__________ACCG______TT
8._PA_56_[PER]
__GGCT__________ACCG______TT
9._PA_56_[PER]
__GGCT__________ACCG______TT
10._RUQ_32
__AACT__________ACCG______TT
11._PA_56_[PER]
__AACT__________ACCG______TT
12._RUQ_32
________________ACCG____AATT
13._NA
CCGGCTCCAGACACAGACCGCCATAATT
14._NA
CCGGCTCCAGACACAGACCGCCATAATT
15._NA
CCGGCTCCAGACACAGACCGCCATAATT
16._NA
CCGGCTCCAGACACAGACCGCCATAATT
17._RUQ_37
________________ACCG____AATT
18._PA_175_[PER]
__GGCT__________ACCG______TT
19._PA_175_[PER]
__GGCT__________ACCG______TT
20._PA_175_[PER]
__GGCT__________ACCG______TT
21._PA_175_[PER]
__GGCT__________ACCG______TT
22._PA_72_[PER]
__AACT__________ACGG______TT
23._PA_72_[PER]
__AACT__________ACGG______TT
24._PA_72_[PER]
__AACT__________ACGG______TT
25._PA_72_[PER]
__AACT__________ACGG______TT
26._PA_72_[PER]
__AACT__________ACGG______TT
27._PA_72_[PER]
__AACT__________ACGG______TT
28._PA_72_[PER]
__AACT__________ACGG______TT
29._PA_72_[PER]
__AACT__________ACGG______TT
30._PA_72_[PER]
__AACT__________ACGG______TT
31._PA_72_[PER]
__AACT__________ACGG______TT
32._RUQ_1569
________________ACCG____AATT
33._RUQ_1436
________________ACGG____AATT
34._RUQ_1564
________________ACCG____AATT
35._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
36._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
37._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
38._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
39._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
40._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
41._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
42._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
43._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
44._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
45._MO_9
__AACT__________CCCG______TT
46._MO_9
__AACT__________CCCG______TT
47._MO_9
__AACT__________CCCG______TT
48._MO_9
__AACT__________CCCG______TT
49._PA_72_[PER]
__AACT__________ACGG______TT
 85868788899091929394    
_Input profile
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
1._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
2._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
3._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
4._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
5._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
6._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
7._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
8._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
9._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
10._RUQ_32
CTCC__AA__CCTTTT____X_XX_XX_XX_X
11._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
12._RUQ_32
______AACCCCTT______X_XX_XX_XX_X
13._NA
TTCCTTAACTCCTTTTAAGGX_XX_XX_XX_X
14._NA
TTCCTTAACTCCTTTTAAGGX_XX_XX_XX_X
15._NA
TTCCTTAACTCCTTTTAAGGX_XX_XX_XX_X
16._NA
TTCCTTAACTCCTTTTAAGGX_XX_XX_XX_X
17._RUQ_37
______AACCCCTT______X_XX_XX_XX_X
18._PA_175_[PER]
TTCC__AA__CCTTTT____X_XX_XX_XX_X
19._PA_175_[PER]
TTCC__AA__CCTTTT____X_XX_XX_XX_X
20._PA_175_[PER]
TTCC__AA__CCTTTT____X_XX_XX_XX_X
21._PA_175_[PER]
TTCC__AA__CCTTTT____X_XX_XX_XX_X
22._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
23._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
24._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
25._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
26._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
27._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
28._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
29._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
30._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
31._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
32._RUQ_1569
______AACCCCTT______X_XX_XX_XX_X
33._RUQ_1436
______AACCCCTT______X_XX_XX_XX_X
34._RUQ_1564
______AACCCCTT______X_XX_XX_XX_X
35._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
36._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
37._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
38._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
39._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
40._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
41._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
42._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
43._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
44._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
45._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
46._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
47._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
48._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
49._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X

Input profile: PA_56_[PER] NA

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

1._PA_56_[PER] NA

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._PA_56_[PER] NA

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: Dead
 Mars, 2018

3._PA_56_[PER] NA

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: Dead
 Mars, 2018

4._PA_56_[PER] NA

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

5._PA_56_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 2
 Dapeng Zhang, 2016

6._PA_56_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 3
 Dapeng Zhang, 2016

7._PA_56_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 4
 Dapeng Zhang, 2016

8._PA_56_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 6
 Dapeng Zhang, 2016

9._PA_56_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

10._PA_56_[PER] RUQ_32

96.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

11._PA_56_[PER]

96.3 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 238
 Dapeng Zhang, 2016

12._PA_56_[PER] RUQ_32

95.2 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

13._PA_175_[PER] NA

92.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._PA_175_[PER] NA

92.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

15._PA_175_[PER] NA

92.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

16._PA_175_[PER] NA

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

17._PA_175_[PER] RUQ_37

91.7 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

18._PA_175_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8127 5
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

19._PA_175_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8127 8
 Dapeng Zhang, 2016

20._PA_175_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8127 9
 Dapeng Zhang, 2016

21._PA_175_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8127 12
 Dapeng Zhang, 2016

22._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

23._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 3
 Dapeng Zhang, 2016

24._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 5
 Dapeng Zhang, 2016

25._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 6
 Dapeng Zhang, 2016

26._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 8
 Dapeng Zhang, 2016

27._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 9
 Dapeng Zhang, 2016

28._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 10
 Dapeng Zhang, 2016

29._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 1 > FP
 Dapeng Zhang, 2016

30._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 4 > FP
 Dapeng Zhang, 2016

31._PA_72_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 7 > FP
 Dapeng Zhang, 2016

32._CRUZ_7_/14 RUQ_1569

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

33._MOQ_6_/95 RUQ_1436

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

34._PA_71_[PER] RUQ_1564

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

35._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

36._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

37._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

38._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

39._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

40._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

41._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

42._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

43._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

44._PA_72_[PER] GC-08-051-1-62

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

45._MO_9

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 4 > FP
 Dapeng Zhang, 2016

46._MO_9

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 2
 Dapeng Zhang, 2016

47._MO_9

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 1 > FP
 Dapeng Zhang, 2016

48._MO_9

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 5
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

49._PA_72_[PER]

90 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 633
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240