SNP Profiles matching ICS 16

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTACGGGGCCCCCCCCGGTTCCTT
1._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
2._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
3._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
4._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
5._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
6._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
7._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
8._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
9._GC-08-067-1-89
AAACCTACGGGGCCCCCCCCGGTTCCTT
10._ICS_16
AAACCTAC________CCCCGG__CC__
11._ICS_16
AAACCTAC________CCCCGG__CC__
12._ICS_16
AAACCTAC________CCCCGG__CC__
13._ICS_16
AAACCTAC________CCCCGG__CC__
14._ICS_16
AAACCTAC________CCCCGG__CC__
15._ICS_16
AAACCTAC________CCCCGG__CC__
16._ICS_16
AAACCTAC________CCCCGG__CC__
17._ICS_16
AAACCTAC________CCCCGG__CC__
18._ICS_16
AAACCTAC________CCCCGG__CC__
19._ICS_16
AAACCTAC________CCCCGG__CC__
20._PA_90_[PER]
AAACCTAC________CCCCGG__CC__
21._PA_150_[PER]
AAACCTAC________CCCCGG__CC__
22._PA_150_[PER]
AAACCTAC________CCCCGG__CC__
23._PA_150_[PER]
AAACCTAC________CCCCGG__CC__
24._PA_150_[PER]
AAACCTAC________CCCCGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGCGCCCGTTAATTGGAAAACC
1._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
2._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
3._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
4._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
5._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
6._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
7._GC-08-067-1-89
AACCAAGGCGCCCGTTAATTGGAAAACC
8._GC-08-067-1-89
AACCAAGGCG__CGTTAATTGGAAAACC
9._GC-08-067-1-89
AACCAAGGCGCC__TTAATTGGAAAACC
10._ICS_16
______GG____CG________AAAA__
11._ICS_16
______GG____CG________AAAA__
12._ICS_16
______GG____CG________AAAA__
13._ICS_16
______GG____CG________AAAA__
14._ICS_16
______GG____CG________AAAA__
15._ICS_16
______GG____CG________AAAA__
16._ICS_16
______GG____CG________AAAA__
17._ICS_16
______GG____CG________AAAA__
18._ICS_16
______GG____CG________AAAA__
19._ICS_16
______GG______________AAAA__
20._PA_90_[PER]
______GGTTCCCG________AAAA__
21._PA_150_[PER]
______GG____CC________AAAA__
22._PA_150_[PER]
______GG____CC________AAAA__
23._PA_150_[PER]
______GG____CC________AAAA__
24._PA_150_[PER]
______GG____CC________AAAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGTGGGGCCAGGGGGGTGGCTGG
1._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
2._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
3._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
4._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
5._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
6._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
7._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
8._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
9._GC-08-067-1-89
GGAATTGTGGGGCCAGGGGGGTGGCTGG
10._ICS_16
GGAA______GG__AGGG____GG____
11._ICS_16
GGAA______GG__AGGG____GG____
12._ICS_16
GGAA______GG__AGGG____GG____
13._ICS_16
GGAA______GG__AGGG____GG____
14._ICS_16
GGAA______GG__AGGG____GG____
15._ICS_16
GGAA______GG__AGGG____GG____
16._ICS_16
GGAA______GG__AGGG____GG____
17._ICS_16
GGAA______GG__AGGG____GG____
18._ICS_16
GGAA______GG__AGGG____GG____
19._ICS_16
GGAA______GG__AGGG____GG____
20._PA_90_[PER]
GGAA______GG__AGGG____GG____
21._PA_150_[PER]
GGAA______CG__AGGG____AG____
22._PA_150_[PER]
GGAA______CG__AGGG____AG____
23._PA_150_[PER]
GGAA______CG__AGGG____AG____
24._PA_150_[PER]
GGAA______CG__AGGG____AG____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTTTAAGGAACCCCGGAGGGTTCC
1._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
2._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
3._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
4._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
5._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
6._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
7._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
8._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
9._GC-08-067-1-89
CCGGTTTTAAGGAACCCCGGAGGGTTCC
10._ICS_16
______TT__________________CC
11._ICS_16
______TT__________________CC
12._ICS_16
______TT__________________CC
13._ICS_16
______TT__________________CC
14._ICS_16
______TT__________________CC
15._ICS_16
______TT__________________CC
16._ICS_16
______TT__________________CC
17._ICS_16
______TT__________________CC
18._ICS_16
______TT__________________CC
19._ICS_16
______TT__________________CC
20._PA_90_[PER]
______TT__________________CC
21._PA_150_[PER]
______TT__________________CC
22._PA_150_[PER]
______TT__________________CC
23._PA_150_[PER]
______TT__________________CC
24._PA_150_[PER]
______TT__________________CC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CTTTGGCCCCCCAAGGGGACGGTTGGGG
1._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
2._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
3._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
4._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
5._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
6._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
7._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
8._GC-08-067-1-89
CTTTGGCCCCCCAAGGGGACGGTTGGGG
9._GC-08-067-1-89
CTTT__CCCCCCAAGGGGACGGTTGGGG
10._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
11._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
12._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
13._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
14._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
15._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
16._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
17._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
18._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
19._ICS_16
CT____CC__CCAAGG__ACGGTTGG__
20._PA_90_[PER]
CT________CCAAGG__ACGGTT____
21._PA_150_[PER]
CT____CC__CCAAGG__ACGGTTGG__
22._PA_150_[PER]
CT____CC__CCAAGG__ACGGTTGG__
23._PA_150_[PER]
CT____CC__CCAAGG__ACGGTTGG__
24._PA_150_[PER]
CT________CCAAGG__ACGGTTGG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CTCCAGCTACAAAAACAGAAGGCCAAAA
1._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
2._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
3._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
4._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
5._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
6._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
7._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
8._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
9._GC-08-067-1-89
CTCCAGCTACAAAAACAGAAGGCCAAAA
10._ICS_16
____AGCT__________AAGG______
11._ICS_16
____AGCT__________AAGG______
12._ICS_16
____AGCT__________AAGG______
13._ICS_16
____AGCT__________AAGG______
14._ICS_16
____AGCT__________AAGG______
15._ICS_16
____AGCT__________AAGG______
16._ICS_16
____AGCT__________AAGG______
17._ICS_16
____AGCT__________AAGG______
18._ICS_16
____AGCT__________AAGG______
19._ICS_16
____AGCT__________AAGG______
20._PA_90_[PER]
____AACT__________AAGG______
21._PA_150_[PER]
____AACT__________ACGG______
22._PA_150_[PER]
____AACT__________ACGG______
23._PA_150_[PER]
____AACT__________ACGG______
24._PA_150_[PER]
____AACT__________ACGG______
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
1._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
2._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
3._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
4._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
5._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
6._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
7._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
8._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
9._GC-08-067-1-89
CTCTCCCTAGCTTTTTAAGGX_XX_XX_XX_X
10._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
11._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
12._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
13._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
14._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
15._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
16._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
17._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
18._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
19._ICS_16
CTCTCC__AG__TTTT____X_XX_XX_XX_X
20._PA_90_[PER]
CTCTCC__AG__TTTT____X_XX_XX_XX_X
21._PA_150_[PER]
TTCCCC__AG__TTTT____X_XX_XX_XX_X
22._PA_150_[PER]
TTCCCC__AG__TTTT____X_XX_XX_XX_X
23._PA_150_[PER]
TTCCCC__AG__TTTT____X_XX_XX_XX_X
24._PA_150_[PER]
TTCC____AG__TTTT____X_XX_XX_XX_X

Input profile: ICS_16 GC-08-067-1-89

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9