SNP Profiles matching PA 72 [PER]

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTCCGGGGCCCCCCCCGGTTCCTT
1._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
2._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
3._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
4._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
5._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
6._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
7._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
8._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
9._GC-08-051-1-62
AAACCTCCGGGGCCCCCCCCGGTTCCTT
10._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
11._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
12._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
13._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
14._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
15._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
16._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
17._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
18._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
19._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
20._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
21._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
22._RUQ_1569
____CTCC____CT__CC____TTCC__
23._RUQ_1059
____CTCC____CC__CC____TTCC__
24._RUQ_952
____CTCC____CC__CC____TTCC__
25._RUQ_32
____CTCC____CT__CC____TTCC__
26._RUQ_1564
____CTCC____CT__CC____TTCC__
27._RUQ_32
AAACCTCC________CCCCGG__CC__
28._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
29._RUQ_1567
____CTAC____CC__CC____TTCC__
30._MO_9
AAACCTCC________CCCCGG__CC__
31._MO_9
AAACCTCC________CCCCGG__CC__
32._MO_9
AAACCTCC________CCCCGG__CC__
33._MO_9
AAACCTCC________CCCCGG__CC__
34._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
35._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
36._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
37._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
38._MO_9
AAACCTCC________CCCCGG__CC__
39._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
40._RUQ_33
____TTAC____CC__CC____TTCC__
41._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
42._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
43._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
44._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
45._RUQ_1531
____CCCC____CT__CC____TTCC__
46._RUQ_1621
____CTCC____CT__CC____TTCC__
47._RUQ_1058
____CTCC____CC__CC____TTCC__
48._NA
AAACCTCCGGGGCCCCCCCCGGTTCCTT
49._PA_41_[PER]
AAACCTCC________CCCCGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGGGCCGGCTAATTGGAAAACC
1._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
2._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
3._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
4._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
5._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
6._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
7._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
8._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
9._GC-08-051-1-62
AACCAAGGGGCCGGCTAATTGGAAAACC
10._PA_72_[PER]
______GG____GG________AAAA__
11._PA_72_[PER]
______GG____GG________AAAA__
12._PA_72_[PER]
______GG____GG________AAAA__
13._PA_72_[PER]
______GG____GG________AAAA__
14._PA_72_[PER]
______GG____GG________AAAA__
15._PA_72_[PER]
______GG____GG________AAAA__
16._PA_72_[PER]
______GG____GG________AAAA__
17._PA_72_[PER]
______GG____GG________AAAA__
18._PA_72_[PER]
______GG____GG________AAAA__
19._PA_72_[PER]
______GG____GG________AAAA__
20._PA_72_[PER]
______GG____GG________AAAA__
21._PA_72_[PER]
______GGTTCCGG________AAAA__
22._RUQ_1569
__________CC________GG__AACC
23._RUQ_1059
__________CC________GG__AACC
24._RUQ_952
__________CC________GG__AACC
25._RUQ_32
__________CC________GG__AACC
26._RUQ_1564
__________CC________GG__AACC
27._RUQ_32
______GG____GG________AAAA__
28._PA_56_[PER]
______GG____GG________AAAA__
29._RUQ_1567
__________CC________GG__AACC
30._MO_9
______GG____CG________AAAA__
31._MO_9
______GG____CG________AAAA__
32._MO_9
______GG____CG________AAAA__
33._MO_9
______GG____CG________AAAA__
34._PA_56_[PER]
______GG____GG________AAAA__
35._PA_56_[PER]
______GG____GG________AAAA__
36._PA_56_[PER]
______GG____GG________AAAA__
37._PA_56_[PER]
______GG____GG________AAAA__
38._MO_9
______GG____CG________AAAA__
39._PA_56_[PER]
______GG____GG________AA____
40._RUQ_33
__________CC________GG__AACC
41._NA
AACC__GGCGCCGGCCAATTGGAAAACC
42._NA
AACC__GGCGCCGGCCAATTGGAAAACC
43._NA
AACC__GGCGCCGGCCAATTGGAAAACC
44._NA
AACC__GGCGCCGGCCAATTGGAAAACC
45._RUQ_1531
__________CC________GG__AACC
46._RUQ_1621
__________CC________GG__AACC
47._RUQ_1058
__________CC________GG__AACC
48._NA
AACC__GGCGCCGGCCAATTGGAA__CC
49._PA_41_[PER]
______GGTTCCGG________AAAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTTTGGCGCCAGGTGGGTAGTTAG
1._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
2._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
3._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
4._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
5._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
6._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
7._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
8._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
9._GC-08-051-1-62
GGAATTTTGGCGCCAGGTGGGTAGTTAG
10._PA_72_[PER]
GGAA______CG__AGGT____AG____
11._PA_72_[PER]
GGAA______CG__AGGT____AG____
12._PA_72_[PER]
GGAA______CG__AGGT____AG____
13._PA_72_[PER]
GGAA______CG__AGGT____AG____
14._PA_72_[PER]
GGAA______CG__AGGT____AG____
15._PA_72_[PER]
GGAA______CG__AGGT____AG____
16._PA_72_[PER]
GGAA______CG__AGGT____AG____
17._PA_72_[PER]
GGAA______CG__AGGT____AG____
18._PA_72_[PER]
GGAA______CG__AGGT____AG____
19._PA_72_[PER]
GGAA______CG__AGGT____AG____
20._PA_72_[PER]
GGAA______CG__AGGT____AG____
21._PA_72_[PER]
GGAA______CG__AGGT____AG____
22._RUQ_1569
GG______GGCGCCAGGG____AGTT__
23._RUQ_1059
GG______GGCGCCAGGT____GGTT__
24._RUQ_952
GG______GGCGCCAGGT____GGTT__
25._RUQ_32
GG______GGCGCCAGGG____GGTT__
26._RUQ_1564
GG______GGCGCCAGGG____AGTT__
27._RUQ_32
GGAA______CG__AGGG____GG____
28._PA_56_[PER]
GGAA______CG__AGGG____GG____
29._RUQ_1567
GG______GGCGCCAGGG____AGCT__
30._MO_9
GGAA______GG__AGGT____GG____
31._MO_9
GGAA______GG__AGGT____GG____
32._MO_9
GGAA______GG__AGGT____GG____
33._MO_9
GGAA______GG__AGGT____GG____
34._PA_56_[PER]
GGAA______CG__AGGG____GG____
35._PA_56_[PER]
GGAA______CG__AGGG____GG____
36._PA_56_[PER]
GGAA______CG__AGGG____GG____
37._PA_56_[PER]
GGAA______CG__AGGG____GG____
38._MO_9
GGAA______GG__AGGT____GG____
39._PA_56_[PER]
GGAA______CG__AGGG____GG____
40._RUQ_33
GG______GGCGCCAGGG____AGCT__
41._NA
GGAATTGTGGCGCCAGGGGGTTGGTTAG
42._NA
GGAATTGTGGCGCCAGGGGGTTGGTTAG
43._NA
GGAATTGTGGCGCCAGGGGGTTGGTTAG
44._NA
GGAATTGTGGCGCCAGGGGGTTGGTTAG
45._RUQ_1531
GG______GGCGCCAGGG____AGTT__
46._RUQ_1621
GG______GGCGCCAGGG____GGTT__
47._RUQ_1058
GG______GGCGCCAAGG____AGCT__
48._NA
GGAATTGTGGCGCCAGGGGGTTGGTTAG
49._PA_41_[PER]
GGAA______CG__AGGT____AG____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTCCAAGGAACCCCGGAAGGCCCT
1._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
2._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
3._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
4._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
5._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
6._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
7._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
8._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
9._GC-08-051-1-62
CCGGTTCCAAGGAACCCCGGAAGGCCCT
10._PA_72_[PER]
______CC________________CCCT
11._PA_72_[PER]
______CC________________CCCT
12._PA_72_[PER]
______CC________________CCCT
13._PA_72_[PER]
______CC________________CCCT
14._PA_72_[PER]
______CC________________CCCT
15._PA_72_[PER]
______CC________________CCCT
16._PA_72_[PER]
______CC________________CCCT
17._PA_72_[PER]
______CC________________CCCT
18._PA_72_[PER]
______CC________________CCCT
19._PA_72_[PER]
______CC________________CCCT
20._PA_72_[PER]
______CC________________CCCT
21._PA_72_[PER]
______CC________________CCCT
22._RUQ_1569
__GGTT____GG____________CC__
23._RUQ_1059
__GGTT____GG____________CC__
24._RUQ_952
__GGTT____GG____________CT__
25._RUQ_32
__GGTT____GG____________CC__
26._RUQ_1564
__GGTT____GG____________CC__
27._RUQ_32
______CC________________CCCC
28._PA_56_[PER]
______CC________________CCCC
29._RUQ_1567
__GGTT____GG____________CC__
30._MO_9
______CC________________CCCC
31._MO_9
______CC________________CCCC
32._MO_9
______CC________________CCCC
33._MO_9
______CC________________CCCC
34._PA_56_[PER]
______CC________________CCCC
35._PA_56_[PER]
______CC________________CCCC
36._PA_56_[PER]
______CC________________CCCC
37._PA_56_[PER]
______CC________________CCCC
38._MO_9
______CC________________CCCC
39._PA_56_[PER]
______CC________________CCCC
40._RUQ_33
__GGTT____GG____________CC__
41._NA
CCGGTTCCAAGGAACCCCGGAGGGCCCC
42._NA
CCGGTTCCAAGGAACCCCGGAGGGCCCC
43._NA
CCGGTTCCAAGGAACCCCGGAGGGCCCC
44._NA
CCGGTTCCAAGGAACCCCGGAGGGCCCC
45._RUQ_1531
__GGTT____GG____________CC__
46._RUQ_1621
__GGTT____GG____________CC__
47._RUQ_1058
__GGTT____GG____________CC__
48._NA
CCGGTTCCAAGGAACCCCGGAGGGCCCC
49._PA_41_[PER]
______CT________________CCCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCCCTAAGGGGACAGGTGGAGCC
1._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
2._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
3._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
4._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
5._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
6._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
7._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
8._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
9._GC-08-051-1-62
TTGGCCCCCTAAGGGGACAGGTGGAGCC
10._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
11._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
12._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
13._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
14._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
15._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
16._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
17._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
18._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
19._PA_72_[PER]
____CC__CTAAGG__ACAGGTGG____
20._PA_72_[PER]
____CC__CTACGG__ACAGGTGG____
21._PA_72_[PER]
________CTACGG__ACAGGT______
22._RUQ_1569
TT__CCCTCCAA__GGACAGGTGGGG__
23._RUQ_1059
TT__CCCTCTAA__GGACAAGGGGAG__
24._RUQ_952
TT__CCCTCTAA__GGACGGGGGGAG__
25._RUQ_32
TT__CCCCCTAC__GGCCAGGTGGAG__
26._RUQ_1564
TT__CCCTCCAA__GGACAGGTGGGG__
27._RUQ_32
____CC__CTACGG__CCAGGTGG____
28._PA_56_[PER]
____CC__CTACGG__CCAGGTGG____
29._RUQ_1567
TT__CCCTCTAA__GGACAATTGGAG__
30._MO_9
____CC__CTAAGG__ACAAGTGG____
31._MO_9
____CC__CTAAGG__ACAAGTGG____
32._MO_9
____CC__CTAAGG__ACAAGTGG____
33._MO_9
____CC__CTAAGG__ACAAGTGG____
34._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
35._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
36._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
37._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
38._MO_9
____CC__CT__GG__ACAAGTGG____
39._PA_56_[PER]
____CC__CTAAGG__CCAGGTGG____
40._RUQ_33
TTGGCCCCCTAA__GGAAAGGGGGGG__
41._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
42._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
43._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
44._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
45._RUQ_1531
TTGGCCCTCTAA__GGACAATTGGGG__
46._RUQ_1621
TT__CCCTCTAA__GGACGGGGGGAG__
47._RUQ_1058
TT__CCCCTTAA__GGAAAGGTGGAG__
48._NA
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
49._PA_41_[PER]
________CCACGG__ACAGGT______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACTACAAAACCAGACGGCCATAATT
1._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
2._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
3._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
4._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
5._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
6._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
7._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
8._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
9._GC-08-051-1-62
CCAACTACAAAACCAGACGGCCATAATT
10._PA_72_[PER]
__AACT__________ACGG______TT
11._PA_72_[PER]
__AACT__________ACGG______TT
12._PA_72_[PER]
__AACT__________ACGG______TT
13._PA_72_[PER]
__AACT__________ACGG______TT
14._PA_72_[PER]
__AACT__________ACGG______TT
15._PA_72_[PER]
__AACT__________ACGG______TT
16._PA_72_[PER]
__AACT__________ACGG______TT
17._PA_72_[PER]
__AACT__________ACGG______TT
18._PA_72_[PER]
__AACT__________ACGG______TT
19._PA_72_[PER]
__AACT__________ACGG______TT
20._PA_72_[PER]
__AACT__________ACGG______TT
21._PA_72_[PER]
__AACT__________ACGG______TT
22._RUQ_1569
________________ACCG____AATT
23._RUQ_1059
________________AAGG____AATT
24._RUQ_952
________________AAGG____AATT
25._RUQ_32
________________ACCG____AATT
26._RUQ_1564
________________ACCG____AATT
27._RUQ_32
__AACT__________ACCG______TT
28._PA_56_[PER]
__AACT__________ACCG______TT
29._RUQ_1567
________________CCGG____AATT
30._MO_9
__AACT__________CCCG______TT
31._MO_9
__AACT__________CCCG______TT
32._MO_9
__AACT__________CCCG______TT
33._MO_9
__AACT__________CCCG______TT
34._PA_56_[PER]
__GGCT__________ACCG______TT
35._PA_56_[PER]
__GGCT__________ACCG______TT
36._PA_56_[PER]
__GGCT__________ACCG______TT
37._PA_56_[PER]
__GGCT__________ACCG______TT
38._MO_9
__AACT__________CCCG______TT
39._PA_56_[PER]
__GGCT__________ACCG______TT
40._RUQ_33
________________AAGG____AATT
41._NA
CCGGCTACAGACAAAGACCGCCATAATT
42._NA
CCGGCTACAGACAAAGACCGCCATAATT
43._NA
CCGGCTACAGACAAAGACCGCCATAATT
44._NA
CCGGCTACAGACAAAGACCGCCATAATT
45._RUQ_1531
________________ACGG____ACTT
46._RUQ_1621
________________ACCC____AATT
47._RUQ_1058
________________ACCC____AATT
48._NA
CCGGCTACAGACAAAGACCGCCATAATT
49._PA_41_[PER]
__AACC__________ACGG______TT
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
1._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
2._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
3._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
4._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
5._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
6._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
7._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
8._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
9._GC-08-051-1-62
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
10._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
11._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
12._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
13._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
14._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
15._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
16._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
17._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
18._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
19._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
20._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
21._PA_72_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
22._RUQ_1569
______AACCCCTT______X_XX_XX_XX_X
23._RUQ_1059
______AGCCCCTT______X_XX_XX_XX_X
24._RUQ_952
______AACCCCTT______X_XX_XX_XX_X
25._RUQ_32
______AACCCCTT______X_XX_XX_XX_X
26._RUQ_1564
______AACCCCTT______X_XX_XX_XX_X
27._RUQ_32
CTCC__AA__CCTTTT____X_XX_XX_XX_X
28._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
29._RUQ_1567
______AACCCCTT______X_XX_XX_XX_X
30._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
31._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
32._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
33._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
34._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
35._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
36._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
37._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
38._MO_9
CTCC__AA__CCTTTT____X_XX_XX_XX_X
39._PA_56_[PER]
CTCC__AA__CCTTTT____X_XX_XX_XX_X
40._RUQ_33
______AACCCCTT______X_XX_XX_XX_X
41._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
42._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
43._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
44._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
45._RUQ_1531
______AA__CCTT______X_XX_XX_XX_X
46._RUQ_1621
______AACCCCTT______X_XX_XX_XX_X
47._RUQ_1058
______AGCCCCTT______X_XX_XX_XX_X
48._NA
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
49._PA_41_[PER]
CTCC__AG__CCTTTT____X_XX_XX_XX_X

Input profile: PA_72_[PER] GC-08-051-1-62

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

1._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

3._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

5._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

7._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

8._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

9._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

10._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 2
 Dapeng Zhang, 2016

11._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 3
 Dapeng Zhang, 2016

12._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 5
 Dapeng Zhang, 2016

13._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 6
 Dapeng Zhang, 2016

14._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 8
 Dapeng Zhang, 2016

15._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 9
 Dapeng Zhang, 2016

16._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 10
 Dapeng Zhang, 2016

17._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 1 > FP
 Dapeng Zhang, 2016

18._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 4 > FP
 Dapeng Zhang, 2016

19._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 7 > FP
 Dapeng Zhang, 2016

20._PA_72_[PER]

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 633
 Dapeng Zhang, 2016

21._PA_72_[PER]

96.3 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 633
 Dapeng Zhang, 2014

22._CRUZ_7_/14 RUQ_1569

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

23._PA_121_[PER] RUQ_1059

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

24._PA_289_[PER] RUQ_952

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

25._PA_56_[PER] RUQ_32

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

26._PA_71_[PER] RUQ_1564

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

27._PA_56_[PER] RUQ_32

92.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

28._PA_56_[PER]

92.5 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 238
 Dapeng Zhang, 2016

29._PA_39_[PER] RUQ_1567

91.5 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

30._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 4 > FP
 Dapeng Zhang, 2016

31._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 2
 Dapeng Zhang, 2016

32._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 1 > FP
 Dapeng Zhang, 2016

33._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 5
 Dapeng Zhang, 2016

34._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 2
 Dapeng Zhang, 2016

35._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 3
 Dapeng Zhang, 2016

36._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 4
 Dapeng Zhang, 2016

37._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 6
 Dapeng Zhang, 2016

38._MO_9

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 3 > FP
 Dapeng Zhang, 2016

39._PA_56_[PER]

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 1
 Dapeng Zhang, 2016

40._PA_70_[PER] RUQ_33

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

41._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

42._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

43._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: Dead
 Mars, 2018

44._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: Dead
 Mars, 2018

45._PA_156_[PER] RUQ_1531

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

46._PA_299_[PER] RUQ_1621

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._PA_4_[PER] RUQ_1058

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._PA_56_[PER] NA

90.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

49._PA_41_[PER]

90 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 667
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240