SNP Profiles matching PA 56 [PER]

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTCCGGGGCCCCCCCCGGTTCCTT
1._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
2._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
3._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
4._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
5._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
6._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
7._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
8._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
9._PA_72_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
10._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
11._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
12._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
13._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
14._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
15._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
16._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
17._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
18._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
19._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
20._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
21._PA_72_[PER]___
AAACCTCC________CCCCGG__CC__
22._CRUZ_7_/14___
____CTCC____CT__CC____TTCC__
23._PA_121_[PER]___
____CTCC____CC__CC____TTCC__
24._PA_289_[PER]___
____CTCC____CC__CC____TTCC__
25._PA_56_[PER]___
____CTCC____CT__CC____TTCC__
26._PA_71_[PER]___
____CTCC____CT__CC____TTCC__
27._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
28._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
29._PA_39_[PER]___
____CTAC____CC__CC____TTCC__
30._MO_9___
AAACCTCC________CCCCGG__CC__
31._MO_9___
AAACCTCC________CCCCGG__CC__
32._MO_9___
AAACCTCC________CCCCGG__CC__
33._MO_9___
AAACCTCC________CCCCGG__CC__
34._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
35._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
36._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
37._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
38._MO_9___
AAACCTCC________CCCCGG__CC__
39._PA_56_[PER]___
AAACCTCC________CCCCGG__CC__
40._PA_70_[PER]___
____TTAC____CC__CC____TTCC__
41._PA_56_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
42._PA_56_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
43._PA_56_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
44._PA_56_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
45._PA_156_[PER]___
____CCCC____CT__CC____TTCC__
46._PA_299_[PER]___
____CTCC____CT__CC____TTCC__
47._PA_4_[PER]___
____CTCC____CC__CC____TTCC__
48._PA_56_[PER]___
AAACCTCCGGGGCCCCCCCCGGTTCCTT
49._PA_41_[PER]___
AAACCTCC________CCCCGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGGGCCGGCTAATTGGAAAACC
1._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
2._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
3._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
4._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
5._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
6._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
7._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
8._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
9._PA_72_[PER]___
AACCAAGGGGCCGGCTAATTGGAAAACC
10._PA_72_[PER]___
______GG____GG________AAAA__
11._PA_72_[PER]___
______GG____GG________AAAA__
12._PA_72_[PER]___
______GG____GG________AAAA__
13._PA_72_[PER]___
______GG____GG________AAAA__
14._PA_72_[PER]___
______GG____GG________AAAA__
15._PA_72_[PER]___
______GG____GG________AAAA__
16._PA_72_[PER]___
______GG____GG________AAAA__
17._PA_72_[PER]___
______GG____GG________AAAA__
18._PA_72_[PER]___
______GG____GG________AAAA__
19._PA_72_[PER]___
______GG____GG________AAAA__
20._PA_72_[PER]___
______GG____GG________AAAA__
21._PA_72_[PER]___
______GGTTCCGG________AAAA__
22._CRUZ_7_/14___
__________CC________GG__AACC
23._PA_121_[PER]___
__________CC________GG__AACC
24._PA_289_[PER]___
__________CC________GG__AACC
25._PA_56_[PER]___
__________CC________GG__AACC
26._PA_71_[PER]___
__________CC________GG__AACC
27._PA_56_[PER]___
______GG____GG________AAAA__
28._PA_56_[PER]___
______GG____GG________AAAA__
29._PA_39_[PER]___
__________CC________GG__AACC
30._MO_9___
______GG____CG________AAAA__
31._MO_9___
______GG____CG________AAAA__
32._MO_9___
______GG____CG________AAAA__
33._MO_9___
______GG____CG________AAAA__
34._PA_56_[PER]___
______GG____GG________AAAA__
35._PA_56_[PER]___
______GG____GG________AAAA__
36._PA_56_[PER]___
______GG____GG________AAAA__
37._PA_56_[PER]___
______GG____GG________AAAA__
38._MO_9___
______GG____CG________AAAA__
39._PA_56_[PER]___
______GG____GG________AA____
40._PA_70_[PER]___
__________CC________GG__AACC
41._PA_56_[PER]___
AACC__GGCGCCGGCCAATTGGAAAACC
42._PA_56_[PER]___
AACC__GGCGCCGGCCAATTGGAAAACC
43._PA_56_[PER]___
AACC__GGCGCCGGCCAATTGGAAAACC
44._PA_56_[PER]___
AACC__GGCGCCGGCCAATTGGAAAACC
45._PA_156_[PER]___
__________CC________GG__AACC
46._PA_299_[PER]___
__________CC________GG__AACC
47._PA_4_[PER]___
__________CC________GG__AACC
48._PA_56_[PER]___
AACC__GGCGCCGGCCAATTGGAA__CC
49._PA_41_[PER]___
______GGTTCCGG________AAAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTTTGGCGCCAGGTGGGTAGTTAG
1._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
2._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
3._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
4._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
5._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
6._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
7._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
8._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
9._PA_72_[PER]___
GGAATTTTGGCGCCAGGTGGGTAGTTAG
10._PA_72_[PER]___
GGAA______CG__AGGT____AG____
11._PA_72_[PER]___
GGAA______CG__AGGT____AG____
12._PA_72_[PER]___
GGAA______CG__AGGT____AG____
13._PA_72_[PER]___
GGAA______CG__AGGT____AG____
14._PA_72_[PER]___
GGAA______CG__AGGT____AG____
15._PA_72_[PER]___
GGAA______CG__AGGT____AG____
16._PA_72_[PER]___
GGAA______CG__AGGT____AG____
17._PA_72_[PER]___
GGAA______CG__AGGT____AG____
18._PA_72_[PER]___
GGAA______CG__AGGT____AG____
19._PA_72_[PER]___
GGAA______CG__AGGT____AG____
20._PA_72_[PER]___
GGAA______CG__AGGT____AG____
21._PA_72_[PER]___
GGAA______CG__AGGT____AG____
22._CRUZ_7_/14___
GG______GGCGCCAGGG____AGTT__
23._PA_121_[PER]___
GG______GGCGCCAGGT____GGTT__
24._PA_289_[PER]___
GG______GGCGCCAGGT____GGTT__
25._PA_56_[PER]___
GG______GGCGCCAGGG____GGTT__
26._PA_71_[PER]___
GG______GGCGCCAGGG____AGTT__
27._PA_56_[PER]___
GGAA______CG__AGGG____GG____
28._PA_56_[PER]___
GGAA______CG__AGGG____GG____
29._PA_39_[PER]___
GG______GGCGCCAGGG____AGCT__
30._MO_9___
GGAA______GG__AGGT____GG____
31._MO_9___
GGAA______GG__AGGT____GG____
32._MO_9___
GGAA______GG__AGGT____GG____
33._MO_9___
GGAA______GG__AGGT____GG____
34._PA_56_[PER]___
GGAA______CG__AGGG____GG____
35._PA_56_[PER]___
GGAA______CG__AGGG____GG____
36._PA_56_[PER]___
GGAA______CG__AGGG____GG____
37._PA_56_[PER]___
GGAA______CG__AGGG____GG____
38._MO_9___
GGAA______GG__AGGT____GG____
39._PA_56_[PER]___
GGAA______CG__AGGG____GG____
40._PA_70_[PER]___
GG______GGCGCCAGGG____AGCT__
41._PA_56_[PER]___
GGAATTGTGGCGCCAGGGGGTTGGTTAG
42._PA_56_[PER]___
GGAATTGTGGCGCCAGGGGGTTGGTTAG
43._PA_56_[PER]___
GGAATTGTGGCGCCAGGGGGTTGGTTAG
44._PA_56_[PER]___
GGAATTGTGGCGCCAGGGGGTTGGTTAG
45._PA_156_[PER]___
GG______GGCGCCAGGG____AGTT__
46._PA_299_[PER]___
GG______GGCGCCAGGG____GGTT__
47._PA_4_[PER]___
GG______GGCGCCAAGG____AGCT__
48._PA_56_[PER]___
GGAATTGTGGCGCCAGGGGGTTGGTTAG
49._PA_41_[PER]___
GGAA______CG__AGGT____AG____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTCCAAGGAACCCCGGAAGGCCCT
1._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
2._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
3._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
4._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
5._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
6._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
7._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
8._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
9._PA_72_[PER]___
CCGGTTCCAAGGAACCCCGGAAGGCCCT
10._PA_72_[PER]___
______CC________________CCCT
11._PA_72_[PER]___
______CC________________CCCT
12._PA_72_[PER]___
______CC________________CCCT
13._PA_72_[PER]___
______CC________________CCCT
14._PA_72_[PER]___
______CC________________CCCT
15._PA_72_[PER]___
______CC________________CCCT
16._PA_72_[PER]___
______CC________________CCCT
17._PA_72_[PER]___
______CC________________CCCT
18._PA_72_[PER]___
______CC________________CCCT
19._PA_72_[PER]___
______CC________________CCCT
20._PA_72_[PER]___
______CC________________CCCT
21._PA_72_[PER]___
______CC________________CCCT
22._CRUZ_7_/14___
__GGTT____GG____________CC__
23._PA_121_[PER]___
__GGTT____GG____________CC__
24._PA_289_[PER]___
__GGTT____GG____________CT__
25._PA_56_[PER]___
__GGTT____GG____________CC__
26._PA_71_[PER]___
__GGTT____GG____________CC__
27._PA_56_[PER]___
______CC________________CCCC
28._PA_56_[PER]___
______CC________________CCCC
29._PA_39_[PER]___
__GGTT____GG____________CC__
30._MO_9___
______CC________________CCCC
31._MO_9___
______CC________________CCCC
32._MO_9___
______CC________________CCCC
33._MO_9___
______CC________________CCCC
34._PA_56_[PER]___
______CC________________CCCC
35._PA_56_[PER]___
______CC________________CCCC
36._PA_56_[PER]___
______CC________________CCCC
37._PA_56_[PER]___
______CC________________CCCC
38._MO_9___
______CC________________CCCC
39._PA_56_[PER]___
______CC________________CCCC
40._PA_70_[PER]___
__GGTT____GG____________CC__
41._PA_56_[PER]___
CCGGTTCCAAGGAACCCCGGAGGGCCCC
42._PA_56_[PER]___
CCGGTTCCAAGGAACCCCGGAGGGCCCC
43._PA_56_[PER]___
CCGGTTCCAAGGAACCCCGGAGGGCCCC
44._PA_56_[PER]___
CCGGTTCCAAGGAACCCCGGAGGGCCCC
45._PA_156_[PER]___
__GGTT____GG____________CC__
46._PA_299_[PER]___
__GGTT____GG____________CC__
47._PA_4_[PER]___
__GGTT____GG____________CC__
48._PA_56_[PER]___
CCGGTTCCAAGGAACCCCGGAGGGCCCC
49._PA_41_[PER]___
______CT________________CCCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCCCTAAGGGGACAGGTGGAGCC
1._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
2._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
3._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
4._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
5._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
6._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
7._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
8._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
9._PA_72_[PER]___
TTGGCCCCCTAAGGGGACAGGTGGAGCC
10._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
11._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
12._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
13._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
14._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
15._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
16._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
17._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
18._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
19._PA_72_[PER]___
____CC__CTAAGG__ACAGGTGG____
20._PA_72_[PER]___
____CC__CTACGG__ACAGGTGG____
21._PA_72_[PER]___
________CTACGG__ACAGGT______
22._CRUZ_7_/14___
TT__CCCTCCAA__GGACAGGTGGGG__
23._PA_121_[PER]___
TT__CCCTCTAA__GGACAAGGGGAG__
24._PA_289_[PER]___
TT__CCCTCTAA__GGACGGGGGGAG__
25._PA_56_[PER]___
TT__CCCCCTAC__GGCCAGGTGGAG__
26._PA_71_[PER]___
TT__CCCTCCAA__GGACAGGTGGGG__
27._PA_56_[PER]___
____CC__CTACGG__CCAGGTGG____
28._PA_56_[PER]___
____CC__CTACGG__CCAGGTGG____
29._PA_39_[PER]___
TT__CCCTCTAA__GGACAATTGGAG__
30._MO_9___
____CC__CTAAGG__ACAAGTGG____
31._MO_9___
____CC__CTAAGG__ACAAGTGG____
32._MO_9___
____CC__CTAAGG__ACAAGTGG____
33._MO_9___
____CC__CTAAGG__ACAAGTGG____
34._PA_56_[PER]___
____CC__CTAAGG__CCAGGTGG____
35._PA_56_[PER]___
____CC__CTAAGG__CCAGGTGG____
36._PA_56_[PER]___
____CC__CTAAGG__CCAGGTGG____
37._PA_56_[PER]___
____CC__CTAAGG__CCAGGTGG____
38._MO_9___
____CC__CT__GG__ACAAGTGG____
39._PA_56_[PER]___
____CC__CTAAGG__CCAGGTGG____
40._PA_70_[PER]___
TTGGCCCCCTAA__GGAAAGGGGGGG__
41._PA_56_[PER]___
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
42._PA_56_[PER]___
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
43._PA_56_[PER]___
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
44._PA_56_[PER]___
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
45._PA_156_[PER]___
TTGGCCCTCTAA__GGACAATTGGGG__
46._PA_299_[PER]___
TT__CCCTCTAA__GGACGGGGGGAG__
47._PA_4_[PER]___
TT__CCCCTTAA__GGAAAGGTGGAG__
48._PA_56_[PER]___
TTGGCCCCCTAAGGGGCCAGGTGGAGCT
49._PA_41_[PER]___
________CCACGG__ACAGGT______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACTACAAAACCAGACGGCCATAATT
1._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
2._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
3._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
4._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
5._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
6._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
7._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
8._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
9._PA_72_[PER]___
CCAACTACAAAACCAGACGGCCATAATT
10._PA_72_[PER]___
__AACT__________ACGG______TT
11._PA_72_[PER]___
__AACT__________ACGG______TT
12._PA_72_[PER]___
__AACT__________ACGG______TT
13._PA_72_[PER]___
__AACT__________ACGG______TT
14._PA_72_[PER]___
__AACT__________ACGG______TT
15._PA_72_[PER]___
__AACT__________ACGG______TT
16._PA_72_[PER]___
__AACT__________ACGG______TT
17._PA_72_[PER]___
__AACT__________ACGG______TT
18._PA_72_[PER]___
__AACT__________ACGG______TT
19._PA_72_[PER]___
__AACT__________ACGG______TT
20._PA_72_[PER]___
__AACT__________ACGG______TT
21._PA_72_[PER]___
__AACT__________ACGG______TT
22._CRUZ_7_/14___
________________ACCG____AATT
23._PA_121_[PER]___
________________AAGG____AATT
24._PA_289_[PER]___
________________AAGG____AATT
25._PA_56_[PER]___
________________ACCG____AATT
26._PA_71_[PER]___
________________ACCG____AATT
27._PA_56_[PER]___
__AACT__________ACCG______TT
28._PA_56_[PER]___
__AACT__________ACCG______TT
29._PA_39_[PER]___
________________CCGG____AATT
30._MO_9___
__AACT__________CCCG______TT
31._MO_9___
__AACT__________CCCG______TT
32._MO_9___
__AACT__________CCCG______TT
33._MO_9___
__AACT__________CCCG______TT
34._PA_56_[PER]___
__GGCT__________ACCG______TT
35._PA_56_[PER]___
__GGCT__________ACCG______TT
36._PA_56_[PER]___
__GGCT__________ACCG______TT
37._PA_56_[PER]___
__GGCT__________ACCG______TT
38._MO_9___
__AACT__________CCCG______TT
39._PA_56_[PER]___
__GGCT__________ACCG______TT
40._PA_70_[PER]___
________________AAGG____AATT
41._PA_56_[PER]___
CCGGCTACAGACAAAGACCGCCATAATT
42._PA_56_[PER]___
CCGGCTACAGACAAAGACCGCCATAATT
43._PA_56_[PER]___
CCGGCTACAGACAAAGACCGCCATAATT
44._PA_56_[PER]___
CCGGCTACAGACAAAGACCGCCATAATT
45._PA_156_[PER]___
________________ACGG____ACTT
46._PA_299_[PER]___
________________ACCC____AATT
47._PA_4_[PER]___
________________ACCC____AATT
48._PA_56_[PER]___
CCGGCTACAGACAAAGACCGCCATAATT
49._PA_41_[PER]___
__AACC__________ACGG______TT
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
1._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
2._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
3._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
4._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
5._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
6._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
7._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
8._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
9._PA_72_[PER]___
CTCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
10._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
11._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
12._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
13._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
14._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
15._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
16._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
17._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
18._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
19._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
20._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
21._PA_72_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
22._CRUZ_7_/14___
______AACCCCTT______X_XX_XX_XX_X
23._PA_121_[PER]___
______AGCCCCTT______X_XX_XX_XX_X
24._PA_289_[PER]___
______AACCCCTT______X_XX_XX_XX_X
25._PA_56_[PER]___
______AACCCCTT______X_XX_XX_XX_X
26._PA_71_[PER]___
______AACCCCTT______X_XX_XX_XX_X
27._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
28._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
29._PA_39_[PER]___
______AACCCCTT______X_XX_XX_XX_X
30._MO_9___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
31._MO_9___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
32._MO_9___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
33._MO_9___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
34._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
35._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
36._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
37._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
38._MO_9___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
39._PA_56_[PER]___
CTCC__AA__CCTTTT____X_XX_XX_XX_X
40._PA_70_[PER]___
______AACCCCTT______X_XX_XX_XX_X
41._PA_56_[PER]___
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
42._PA_56_[PER]___
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
43._PA_56_[PER]___
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
44._PA_56_[PER]___
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
45._PA_156_[PER]___
______AA__CCTT______X_XX_XX_XX_X
46._PA_299_[PER]___
______AACCCCTT______X_XX_XX_XX_X
47._PA_4_[PER]___
______AGCCCCTT______X_XX_XX_XX_X
48._PA_56_[PER]___
CTCCCTAACTCCTTTTAAGGX_XX_XX_XX_X
49._PA_41_[PER]___
CTCC__AG__CCTTTT____X_XX_XX_XX_X

Input profile: PA_72_[PER] GC-08-051-1-62

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

1._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

2._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

3._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

4._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

5._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

6._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._PA_72_[PER] GC-08-051-1-62

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

10._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 2
 Dapeng Zhang, 2016

11._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 3
 Dapeng Zhang, 2016

12._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 5
 Dapeng Zhang, 2016

13._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 6
 Dapeng Zhang, 2016

14._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 8
 Dapeng Zhang, 2016

15._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 9
 Dapeng Zhang, 2016

16._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 10
 Dapeng Zhang, 2016

17._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 1 > FP
 Dapeng Zhang, 2016

18._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 4 > FP
 Dapeng Zhang, 2016

19._PA_72_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8162 7 > FP
 Dapeng Zhang, 2016

20._PA_72_[PER]

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 633
 Dapeng Zhang, 2016

21._PA_72_[PER]

96.3 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 633
 Dapeng Zhang, 2014

22._CRUZ_7_/14 RUQ_1569

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

23._PA_121_[PER] RUQ_1059

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

24._PA_289_[PER] RUQ_952

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

25._PA_56_[PER] RUQ_32

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

26._PA_71_[PER] RUQ_1564

92.7 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

27._PA_56_[PER] RUQ_32

92.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

28._PA_56_[PER]

92.5 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 238
 Dapeng Zhang, 2016

29._PA_39_[PER] RUQ_1567

91.5 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

30._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 4 > FP
 Dapeng Zhang, 2016

31._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 2
 Dapeng Zhang, 2016

32._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 1 > FP
 Dapeng Zhang, 2016

33._MO_9

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 5
 Dapeng Zhang, 2016

34._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 2
 Dapeng Zhang, 2016

35._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 3
 Dapeng Zhang, 2016

36._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 4
 Dapeng Zhang, 2016

37._PA_56_[PER]

91.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 6
 Dapeng Zhang, 2016

38._MO_9

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 3 > FP
 Dapeng Zhang, 2016

39._PA_56_[PER]

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8176 1
 Dapeng Zhang, 2016

40._PA_70_[PER] RUQ_33

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

41._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

42._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

43._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: Dead
 Mars, 2018

44._PA_56_[PER] NA

90.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: Dead
 Mars, 2018

45._PA_156_[PER] RUQ_1531

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

46._PA_299_[PER] RUQ_1621

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._PA_4_[PER] RUQ_1058

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._PA_56_[PER] NA

90.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

49._PA_41_[PER]

90 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 667
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240