SNP Profiles matching PA 156 [PER]

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AAAACTAAGGGGCCCCCCCCGGTTCTCT
1._GC-05-138-3-40
AAAACTAAGGGGCCCCCCCCGGTTCTCT
2._GC-05-138-3-40
AAAACTAAGGGGCCCCCCCCGGTTCTCT
3._GC-05-138-3-40
AAAACTAAGGGGCCCCCCCCGGTTCTCT
4._GC-05-138-3-40
AAAACTAAGGGGCCCCCCCCGGTTCTCT
5._PA_156_[PER]
AAAACTAA________CCCCGG__CT__
6._PA_156_[PER]
AAAACTAA________CCCCGG__CT__
7._PA_156_[PER]
AAAACTAA________CCCCGG__CT__
8._PA_156_[PER]
AAAACTAA________CCCCGG__CT__
9._PA_156_[PER]
AAAACTAA________CCCCGG__CT__
 1516171819202122232425262728
_Input profile
AACCAAGGCCCGCTAATTGGATAACCCG
1._GC-05-138-3-40
AACCAAGGCCCGCTAATTGGATAACCCG
2._GC-05-138-3-40
AACCAAGGCCCGCTAATTGGATAACCCG
3._GC-05-138-3-40
AACCAAGGCCCGCTAATTGGATAACCCG
4._GC-05-138-3-40
AACCAAGGCCCGCTAATTGGATAACCCG
5._PA_156_[PER]
____AA____CG________ATAA__CG
6._PA_156_[PER]
____AA____CG________ATAA__CG
7._PA_156_[PER]
____AA____CG________ATAA__CG
8._PA_156_[PER]
____AA____CG________ATAA__CG
9._PA_156_[PER]
____AA____CG________ATAA__CG
 2930313233343536373839404142
_Input profile
AATTGGAGCGCCAGTTGGTTAGCTAGCC
1._GC-05-138-3-40
AATTGGAGCGCCAGTTGGTTAGCTAGCC
2._GC-05-138-3-40
AATTGGAGCGCCAGTTGGTTAGCTAGCC
3._GC-05-138-3-40
AATTGGAGCGCCAGTTGGTTAGCTAGCC
4._GC-05-138-3-40
AATTGGAGCGCCAGTTGGTTAGCTAGCC
5._PA_156_[PER]
AA______CG__AGTT____AG______
6._PA_156_[PER]
AA______CG__AGTT____AG______
7._PA_156_[PER]
AA______CG__AGTT____AG______
8._PA_156_[PER]
AA______CG__AGTT____AG______
9._PA_156_[PER]
AA______CG__AGTT____AG______
 4344454647484950515253545556
_Input profile
GGTTCTAAGGAACCCCGGGGTTTTCTTT
1._GC-05-138-3-40
GGTTCTAAGGAACCCCGGGGTTTTCTTT
2._GC-05-138-3-40
GGTTCTAAGGAACCCCGGGGTTTTCTTT
3._GC-05-138-3-40
GGTTCTAAGGAACCCCGGGGTTTTCTTT
4._GC-05-138-3-40
GGTTCTAAGGAACCCCGGGGTTTTCTTT
5._PA_156_[PER]
____CT__________________CT__
6._PA_156_[PER]
____CT__________________CT__
7._PA_156_[PER]
____CT__________________CT__
8._PA_156_[PER]
____CT__________________CT__
9._PA_156_[PER]
____CT__________________CT__
 5758596061626364656667686970
_Input profile
AACCCTCTAAGGGGAAAAGTGGGGTTCC
1._GC-05-138-3-40
AACCCTCTAAGGGGAAAAGTGGGGTTCC
2._GC-05-138-3-40
AACCCTCTAAGGGGAAAAGTGGGGTTCC
3._GC-05-138-3-40
AACCCTCTAAGGGGAAAAGTGGGGTTCC
4._GC-05-138-3-40
AACCCTCTAAGGGGAAAAGTGGGGTTCC
5._PA_156_[PER]
__CC__CTAAGG__AAAAGTGG______
6._PA_156_[PER]
__CC__CTAAGG__AAAAGTGG______
7._PA_156_[PER]
__CC__CTAAGG__AAAAGTGG______
8._PA_156_[PER]
__CC__CTAAGG__AAAAGTGG______
9._PA_156_[PER]
__CC__CTAAGG__AAAAGTGG______
 7172737475767778798081828384
_Input profile
AGCTAAAAACAAAACCGGCCATAACTTT
1._GC-05-138-3-40
AGCTAAAAACAAAACCGGCCATAACTTT
2._GC-05-138-3-40
AGCTAAAAACAAAACCGGCCATAACTTT
3._GC-05-138-3-40
AGCTAAAAACAAAACCGGCCATAACTTT
4._GC-05-138-3-40
AGCTAAAAACAAAACCGGCCATAACTTT
5._PA_156_[PER]
AGCT__________CCGG______CTTT
6._PA_156_[PER]
AGCT__________CCGG______CTTT
7._PA_156_[PER]
AGCT__________CCGG______CTTT
8._PA_156_[PER]
AGCT__________CCGG______CTTT
9._PA_156_[PER]
AGCT__________CCGG______CTTT
 858687888990919293     
_Input profile
TTCCAATTCTTTTTATGGX_XX_XX_XX_XX_X
1._GC-05-138-3-40
TTCCAATTCTTTTTATGGX_XX_XX_XX_XX_X
2._GC-05-138-3-40
TTCCAATTCTTTTTATGGX_XX_XX_XX_XX_X
3._GC-05-138-3-40
TTCCAATTCTTTTTATGGX_XX_XX_XX_XX_X
4._GC-05-138-3-40
TTCCAATTCTTTTTATGGX_XX_XX_XX_XX_X
5._PA_156_[PER]
TT__AA__CTTTTT____X_XX_XX_XX_XX_X
6._PA_156_[PER]
TT__AA__CTTTTT____X_XX_XX_XX_XX_X
7._PA_156_[PER]
TT__AA__CTTTTT____X_XX_XX_XX_XX_X
8._PA_156_[PER]
TT__AA__CTTTTT____X_XX_XX_XX_XX_X
9._PA_156_[PER]
TT__AA__CTTTTT____X_XX_XX_XX_XX_X

Input profile: PA_156_[PER] GC-05-138-3-40

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

1._PA_156_[PER] GC-05-138-3-40

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._PA_156_[PER] GC-05-138-3-40

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

3._PA_156_[PER] GC-05-138-3-40

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._PA_156_[PER] GC-05-138-3-40

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

5._PA_156_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5340 3 > FP
 Dapeng Zhang, 2016

6._PA_156_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5340 2 > FP
 Dapeng Zhang, 2016

7._PA_156_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5340 1 > FP
 Dapeng Zhang, 2016

8._PA_156_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5340 5
 Dapeng Zhang, 2016

9._PA_156_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5340 4
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240