SNP Profiles matching MO 9

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTCCGGGGCCCCCCCCGGTTCCTT
1._GC-05-071-2-22
AAACCTCCGGGGCCCCCCCCGGTTCCTT
2._GC-05-119-3-21
AAACCTCCGGGGCCCCCCCCGGTTCCTT
3._GC-05-119-3-21
AAACCTCCGGGGCCCCCCCCGGTTCCTT
4._GC-05-071-2-22
AAACCTCCGGGGCCCCCCCCGGTTCCTT
5._MO_9
AAACCTCC________CCCCGG__CC__
6._MO_9
AAACCTCC________CCCCGG__CC__
7._MO_9
AAACCTCC________CCCCGG__CC__
8._MO_9
AAACCTCC________CCCCGG__CC__
9._MO_9
AAACCTCC________CCCCGG__CC__
10._MO_9
AAACCTCC________CCCCGG__CC__
11._IMC_41
AA__CC__________CCCCGG__CC__
12._IMC_41
AAACCCAC________CCCCGG__CC__
13._IMC_41
AAACCCAC________CCCCGG__CC__
14._IMC_41
AAACCCAC________CCCCGG__CC__
15._IMC_41
AAACCCAC________CCCCGG__CC__
16._IMC_41
AAACCCAC________CCCCGG__CC__
17._RUQ_32
AAACCTCC________CCCCGG__CC__
18._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
19._RUQ_1529
____CCAC____CC__CC____TTCC__
20._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
21._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
22._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
23._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
24._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
25._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
26._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
27._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
28._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
29._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
30._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
31._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
32._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
33._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
34._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
35._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
36._RUQ_1059
____CTCC____CC__CC____TTCC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGGGCCCGTTAATTGGAAAACC
1._GC-05-071-2-22
AACCAAGGGGCCCGTTAATTGGAAAACC
2._GC-05-119-3-21
AACCAAGGGGCCCGTTAATTGGAAAACC
3._GC-05-119-3-21
AACCAAGGGGCCCGTTAATTGGAAAACC
4._GC-05-071-2-22
AACCAAGGGGCCCGTTAATTGGAAAACC
5._MO_9
______GG____CG________AAAA__
6._MO_9
______GG____CG________AAAA__
7._MO_9
______GG____CG________AAAA__
8._MO_9
______GG____CG________AAAA__
9._MO_9
______GG____CG________AAAA__
10._MO_9
______GG____CG________AAAA__
11._IMC_41
______GG____GG________AAAA__
12._IMC_41
______GG____GG________AAAA__
13._IMC_41
______GG____GG________AAAA__
14._IMC_41
______GG____GG________AAAA__
15._IMC_41
______GG____GG________AAAA__
16._IMC_41
______GG____GG________AAAA__
17._RUQ_32
______GG____GG________AAAA__
18._PA_56_[PER]
______GG____GG________AAAA__
19._RUQ_1529
__________CC________GG__AACC
20._PA_72_[PER]
______GG____GG________AAAA__
21._PA_72_[PER]
______GG____GG________AAAA__
22._PA_72_[PER]
______GG____GG________AAAA__
23._PA_72_[PER]
______GG____GG________AAAA__
24._PA_72_[PER]
______GG____GG________AAAA__
25._PA_72_[PER]
______GG____GG________AAAA__
26._PA_72_[PER]
______GG____GG________AAAA__
27._PA_72_[PER]
______GG____GG________AAAA__
28._PA_72_[PER]
______GG____GG________AAAA__
29._PA_72_[PER]
______GG____GG________AAAA__
30._PA_72_[PER]
______GG____GG________AAAA__
31._GC-08-275-8-47
AACCAAGGCG__GGTTAATTGGAAAACC
32._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
33._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
34._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
35._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
36._RUQ_1059
__________CC________GG__AACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTTTAGGGCCAGGTGGGTGGTTGG
1._GC-05-071-2-22
GGAATTTTAGGGCCAGGTGGGTGGTTGG
2._GC-05-119-3-21
GGAATTTTAGGGCCAGGTGGGTGGTTGG
3._GC-05-119-3-21
GGAATTTTAGGGCCAGGTGGGTGGTTGG
4._GC-05-071-2-22
GGAATTTTAGGGCCAGGTGGGTGGTTGG
5._MO_9
GGAA______GG__AGGT____GG____
6._MO_9
GGAA______GG__AGGT____GG____
7._MO_9
GGAA______GG__AGGT____GG____
8._MO_9
GGAA______GG__AGGT____GG____
9._MO_9
GGAA______GG__AGGT____GG____
10._MO_9
GGAA______GG__AGGT____GG____
11._IMC_41
GGAA______GG__AGGT____GG____
12._IMC_41
GGAA______GG__AGGT____GG____
13._IMC_41
GGAA______GG__AGGT____GG____
14._IMC_41
GGAA______GG__AGGT____GG____
15._IMC_41
GGAA______GG__AGGT____GG____
16._IMC_41
GGAA______GG__AGGT____GG____
17._RUQ_32
GGAA______CG__AGGG____GG____
18._PA_56_[PER]
GGAA______CG__AGGG____GG____
19._RUQ_1529
GG______AGGGCCAGGT____GGTT__
20._PA_72_[PER]
GGAA______CG__AGGT____AG____
21._PA_72_[PER]
GGAA______CG__AGGT____AG____
22._PA_72_[PER]
GGAA______CG__AGGT____AG____
23._PA_72_[PER]
GGAA______CG__AGGT____AG____
24._PA_72_[PER]
GGAA______CG__AGGT____AG____
25._PA_72_[PER]
GGAA______CG__AGGT____AG____
26._PA_72_[PER]
GGAA______CG__AGGT____AG____
27._PA_72_[PER]
GGAA______CG__AGGT____AG____
28._PA_72_[PER]
GGAA______CG__AGGT____AG____
29._PA_72_[PER]
GGAA______CG__AGGT____AG____
30._PA_72_[PER]
GGAA______CG__AGGT____AG____
31._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
32._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
33._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
34._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
35._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
36._RUQ_1059
GG______GGCGCCAGGT____GGTT__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTCCAAGGAACCCCGGAGGGCCCC
1._GC-05-071-2-22
CCGGTTCCAAGGAACCCCGGAGGGCCCC
2._GC-05-119-3-21
CCGGTTCCAAGGAACCCCGGAGGGCCCC
3._GC-05-119-3-21
CCGGTTCCAAGGAACCCCGGAGGGCCCC
4._GC-05-071-2-22
CCGGTTCCAAGGAACCCCGGAGGGCCCC
5._MO_9
______CC________________CCCC
6._MO_9
______CC________________CCCC
7._MO_9
______CC________________CCCC
8._MO_9
______CC________________CCCC
9._MO_9
______CC________________CCCC
10._MO_9
______CC________________CCCC
11._IMC_41
______CC________________CCCC
12._IMC_41
______CC________________CCCC
13._IMC_41
______CC________________CCCC
14._IMC_41
______CC________________CCCC
15._IMC_41
______CC________________CCCC
16._IMC_41
______CC________________CCCC
17._RUQ_32
______CC________________CCCC
18._PA_56_[PER]
______CC________________CCCC
19._RUQ_1529
__GGTT____GG____________CC__
20._PA_72_[PER]
______CC________________CCCT
21._PA_72_[PER]
______CC________________CCCT
22._PA_72_[PER]
______CC________________CCCT
23._PA_72_[PER]
______CC________________CCCT
24._PA_72_[PER]
______CC________________CCCT
25._PA_72_[PER]
______CC________________CCCT
26._PA_72_[PER]
______CC________________CCCT
27._PA_72_[PER]
______CC________________CCCT
28._PA_72_[PER]
______CC________________CCCT
29._PA_72_[PER]
______CC________________CCCT
30._PA_72_[PER]
______CC________________CCCT
31._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
32._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
33._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
34._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
35._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
36._RUQ_1059
__GGTT____GG____________CC__
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCTCTGGGGACAAGTGGAGCTCC
1._GC-05-071-2-22
TTGGCCCTCTGGGGACAAGTGGAGCTCC
2._GC-05-119-3-21
TTGGCCCTCTGGGGACAAGTGGAGCTCC
3._GC-05-119-3-21
TTGGCCCTCTGGGGACAAGTGGAGCTCC
4._GC-05-071-2-22
TT__CCCTCTGGGGACAAGTGGAGCTCC
5._MO_9
____CC__CTGG__ACAAGTGG______
6._MO_9
____CC__CTGG__ACAAGTGG______
7._MO_9
____CC__CTGG__ACAAGTGG______
8._MO_9
____CC__CTGG__ACAAGTGG______
9._MO_9
____CC__CTGG__ACAAGTGG______
10._MO_9
________CTGG__ACAAGTGG______
11._IMC_41
________CCGG__ACAAGTGG______
12._IMC_41
____CC__CCGG__ACAAGTGG______
13._IMC_41
____CC__CCGG__ACAAGTGG______
14._IMC_41
____CC__CCGG__ACAAGTGG______
15._IMC_41
____CC__CCGG__ACAAGTGG______
16._IMC_41
____CC__CCGG__ACAAGTGG______
17._RUQ_32
____CC__CTGG__CCAGGTGG______
18._PA_56_[PER]
____CC__CTGG__CCAGGTGG______
19._RUQ_1529
TT__CCCCCC__GGACAAGTGGAG____
20._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
21._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
22._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
23._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
24._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
25._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
26._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
27._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
28._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
29._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
30._PA_72_[PER]
____CC__CTGG__ACAGGTGG______
31._GC-08-275-8-47
TTAGCCCCCCGGGGACAAGTGGAGCCCC
32._GC-08-275-8-47
TTAGCCCCCCGGGGACAAGTGGAGCCCC
33._GC-08-275-8-47
TTAGCCCCCCGGGGACAAGTGGAGCCCC
34._GC-08-275-8-47
TTAGCCCCCCGGGGACAAGTGGAGCCCC
35._GC-08-275-8-47
TTAGCCCCCCGGGGACAAGTGGAGCCCC
36._RUQ_1059
TT__CCCTCT__GGACAAGGGGAG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
AACTCCAGCCACGGCCCGCCTTAATTCT
1._GC-05-071-2-22
AACTCCAGCCACGGCCCGCCTTAATTCT
2._GC-05-119-3-21
AACTCCAGCCACGGCCCGCCTTAATTCT
3._GC-05-119-3-21
AACTCCAGCCACGGCCCGCCTTAATTCT
4._GC-05-071-2-22
AACTCCAGCCACGGCCCGCCTTAATTCT
5._MO_9
AACT__________CCCG______TTCT
6._MO_9
AACT__________CCCG______TTCT
7._MO_9
AACT__________CCCG______TTCT
8._MO_9
AACT__________CCCG______TTCT
9._MO_9
AACT__________CCCG______TTCT
10._MO_9
AACT__________CCCG______TTCT
11._IMC_41
AACT__________AACG______TTCT
12._IMC_41
AACT__________AACG______TTCT
13._IMC_41
AACT__________AACG______TTCT
14._IMC_41
AACT__________AACG______TTCT
15._IMC_41
AACT__________AACG______TTCT
16._IMC_41
AACT__________AACG______TTCT
17._RUQ_32
AACT__________ACCG______TTCT
18._PA_56_[PER]
AACT__________ACCG______TTCT
19._RUQ_1529
______________AACG____AATT__
20._PA_72_[PER]
AACT__________ACGG______TTCT
21._PA_72_[PER]
AACT__________ACGG______TTCT
22._PA_72_[PER]
AACT__________ACGG______TTCT
23._PA_72_[PER]
AACT__________ACGG______TTCT
24._PA_72_[PER]
AACT__________ACGG______TTCT
25._PA_72_[PER]
AACT__________ACGG______TTCT
26._PA_72_[PER]
AACT__________ACGG______TTCT
27._PA_72_[PER]
AACT__________ACGG______TTCT
28._PA_72_[PER]
AACT__________ACGG______TTCT
29._PA_72_[PER]
AACT__________ACGG______TTCT
30._PA_72_[PER]
AACT__________ACGG______TTCT
31._GC-08-275-8-47
AACTACAACCAC__AACGCCTTAATTCT
32._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
33._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
34._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
35._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
36._RUQ_1059
______________AAGG____AATT__
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
1._GC-05-071-2-22
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
2._GC-05-119-3-21
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
3._GC-05-119-3-21
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
4._GC-05-071-2-22
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
5._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
6._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
7._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
8._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
9._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
10._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
11._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
12._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
13._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
14._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
15._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
16._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
17._RUQ_32
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
18._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
19._RUQ_1529
____AACCCCTT______X_XX_XX_XX_XX_X
20._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
21._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
22._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
23._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
24._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
25._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
26._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
27._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
28._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
29._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
30._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
31._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
32._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
33._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
34._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
35._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
36._RUQ_1059
____AGCCCCTT______X_XX_XX_XX_XX_X

Input profile: MO_9 GC-05-119-3-21

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3