SNP Profiles matching MO 9

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAACCTCCGGGGCCCCCCCCGGTTCCTT
1._GC-05-071-2-22
AAACCTCCGGGGCCCCCCCCGGTTCCTT
2._GC-05-119-3-21
AAACCTCCGGGGCCCCCCCCGGTTCCTT
3._GC-05-119-3-21
AAACCTCCGGGGCCCCCCCCGGTTCCTT
4._GC-05-119-3-21
AAACCTCCGGGGCCCCCCCCGGTTCCTT
5._MO_9
AAACCTCC________CCCCGG__CC__
6._MO_9
AAACCTCC________CCCCGG__CC__
7._MO_9
AAACCTCC________CCCCGG__CC__
8._MO_9
AAACCTCC________CCCCGG__CC__
9._MO_9
AAACCTCC________CCCCGG__CC__
10._MO_9
AAACCTCC________CCCCGG__CC__
11._IMC_41
AAACCCAC________CCCCGG__CC__
12._IMC_41
AAACCCAC________CCCCGG__CC__
13._IMC_41
AAACCCAC________CCCCGG__CC__
14._IMC_41
AAACCCAC________CCCCGG__CC__
15._IMC_41
AAACCCAC________CCCCGG__CC__
16._IMC_41
AA__CC__________CCCCGG__CC__
17._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
18._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
19._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
20._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
21._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
22._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
23._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
24._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
25._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
26._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
27._RUQ_32
AAACCTCC________CCCCGG__CC__
28._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
29._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
30._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
31._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
32._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
33._GC-08-275-8-47
AAACCCACGGGGCTCCCCCCGGTTCCCT
34._RUQ_1529
____CCAC____CC__CC____TTCC__
35._RUQ_1059
____CTCC____CC__CC____TTCC__
36._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
37._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
38._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
39._PA_56_[PER]
AAACCTCC________CCCCGG__CC__
40._PA_72_[PER]
AAACCTCC________CCCCGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAAGGGGCCCGTTAATTGGAAAACC
1._GC-05-071-2-22
AACCAAGGGGCCCGTTAATTGGAAAACC
2._GC-05-119-3-21
AACCAAGGGGCCCGTTAATTGGAAAACC
3._GC-05-119-3-21
AACCAAGGGGCCCGTTAATTGGAAAACC
4._GC-05-119-3-21
AACCAAGGGGCCCGTTAATTGGAAAACC
5._MO_9
______GG____CG________AAAA__
6._MO_9
______GG____CG________AAAA__
7._MO_9
______GG____CG________AAAA__
8._MO_9
______GG____CG________AAAA__
9._MO_9
______GG____CG________AAAA__
10._MO_9
______GG____CG________AAAA__
11._IMC_41
______GG____GG________AAAA__
12._IMC_41
______GG____GG________AAAA__
13._IMC_41
______GG____GG________AAAA__
14._IMC_41
______GG____GG________AAAA__
15._IMC_41
______GG____GG________AAAA__
16._IMC_41
______GG____GG________AAAA__
17._PA_72_[PER]
______GG____GG________AAAA__
18._PA_72_[PER]
______GG____GG________AAAA__
19._PA_72_[PER]
______GG____GG________AAAA__
20._PA_72_[PER]
______GG____GG________AAAA__
21._PA_72_[PER]
______GG____GG________AAAA__
22._PA_72_[PER]
______GG____GG________AAAA__
23._PA_72_[PER]
______GG____GG________AAAA__
24._PA_72_[PER]
______GG____GG________AAAA__
25._PA_72_[PER]
______GG____GG________AAAA__
26._PA_72_[PER]
______GG____GG________AAAA__
27._RUQ_32
______GG____GG________AAAA__
28._PA_56_[PER]
______GG____GG________AAAA__
29._GC-08-275-8-47
AACCAAGGCG__GGTTAATTGGAAAACC
30._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
31._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
32._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
33._GC-08-275-8-47
AACCAAGGCGCCGGTTAATTGGAAAACC
34._RUQ_1529
__________CC________GG__AACC
35._RUQ_1059
__________CC________GG__AACC
36._PA_56_[PER]
______GG____GG________AAAA__
37._PA_56_[PER]
______GG____GG________AAAA__
38._PA_56_[PER]
______GG____GG________AAAA__
39._PA_56_[PER]
______GG____GG________AAAA__
40._PA_72_[PER]
______GG____GG________AAAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTTTAGGGCCAGGTGGGTGGTTGG
1._GC-05-071-2-22
GGAATTTTAGGGCCAGGTGGGTGGTTGG
2._GC-05-119-3-21
GGAATTTTAGGGCCAGGTGGGTGGTTGG
3._GC-05-119-3-21
GGAATTTTAGGGCCAGGTGGGTGGTTGG
4._GC-05-119-3-21
GGAATTTTAGGGCCAGGTGGGTGGTTGG
5._MO_9
GGAA______GG__AGGT____GG____
6._MO_9
GGAA______GG__AGGT____GG____
7._MO_9
GGAA______GG__AGGT____GG____
8._MO_9
GGAA______GG__AGGT____GG____
9._MO_9
GGAA______GG__AGGT____GG____
10._MO_9
GGAA______GG__AGGT____GG____
11._IMC_41
GGAA______GG__AGGT____GG____
12._IMC_41
GGAA______GG__AGGT____GG____
13._IMC_41
GGAA______GG__AGGT____GG____
14._IMC_41
GGAA______GG__AGGT____GG____
15._IMC_41
GGAA______GG__AGGT____GG____
16._IMC_41
GGAA______GG__AGGT____GG____
17._PA_72_[PER]
GGAA______CG__AGGT____AG____
18._PA_72_[PER]
GGAA______CG__AGGT____AG____
19._PA_72_[PER]
GGAA______CG__AGGT____AG____
20._PA_72_[PER]
GGAA______CG__AGGT____AG____
21._PA_72_[PER]
GGAA______CG__AGGT____AG____
22._PA_72_[PER]
GGAA______CG__AGGT____AG____
23._PA_72_[PER]
GGAA______CG__AGGT____AG____
24._PA_72_[PER]
GGAA______CG__AGGT____AG____
25._PA_72_[PER]
GGAA______CG__AGGT____AG____
26._PA_72_[PER]
GGAA______CG__AGGT____AG____
27._RUQ_32
GGAA______CG__AGGG____GG____
28._PA_56_[PER]
GGAA______CG__AGGG____GG____
29._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
30._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
31._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
32._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
33._GC-08-275-8-47
GGAATTTTAGGGCCAGGTGGTTGGTTGG
34._RUQ_1529
GG______AGGGCCAGGT____GGTT__
35._RUQ_1059
GG______GGCGCCAGGT____GGTT__
36._PA_56_[PER]
GGAA______CG__AGGG____GG____
37._PA_56_[PER]
GGAA______CG__AGGG____GG____
38._PA_56_[PER]
GGAA______CG__AGGG____GG____
39._PA_56_[PER]
GGAA______CG__AGGG____GG____
40._PA_72_[PER]
GGAA______CG__AGGT____AG____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTCCAAGGAACCCCGGAGGGCCCC
1._GC-05-071-2-22
CCGGTTCCAAGGAACCCCGGAGGGCCCC
2._GC-05-119-3-21
CCGGTTCCAAGGAACCCCGGAGGGCCCC
3._GC-05-119-3-21
CCGGTTCCAAGGAACCCCGGAGGGCCCC
4._GC-05-119-3-21
CCGGTTCCAAGGAACCCCGGAGGGCCCC
5._MO_9
______CC________________CCCC
6._MO_9
______CC________________CCCC
7._MO_9
______CC________________CCCC
8._MO_9
______CC________________CCCC
9._MO_9
______CC________________CCCC
10._MO_9
______CC________________CCCC
11._IMC_41
______CC________________CCCC
12._IMC_41
______CC________________CCCC
13._IMC_41
______CC________________CCCC
14._IMC_41
______CC________________CCCC
15._IMC_41
______CC________________CCCC
16._IMC_41
______CC________________CCCC
17._PA_72_[PER]
______CC________________CCCT
18._PA_72_[PER]
______CC________________CCCT
19._PA_72_[PER]
______CC________________CCCT
20._PA_72_[PER]
______CC________________CCCT
21._PA_72_[PER]
______CC________________CCCT
22._PA_72_[PER]
______CC________________CCCT
23._PA_72_[PER]
______CC________________CCCT
24._PA_72_[PER]
______CC________________CCCT
25._PA_72_[PER]
______CC________________CCCT
26._PA_72_[PER]
______CC________________CCCT
27._RUQ_32
______CC________________CCCC
28._PA_56_[PER]
______CC________________CCCC
29._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
30._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
31._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
32._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
33._GC-08-275-8-47
CCGGTTCCAAGGAACCCCGGAAGGCCCC
34._RUQ_1529
__GGTT____GG____________CC__
35._RUQ_1059
__GGTT____GG____________CC__
36._PA_56_[PER]
______CC________________CCCC
37._PA_56_[PER]
______CC________________CCCC
38._PA_56_[PER]
______CC________________CCCC
39._PA_56_[PER]
______CC________________CCCC
40._PA_72_[PER]
______CC________________CCCT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTCCCTCTAAGGGGACAAGTGGAGCTCC
1._GC-05-071-2-22
TTCCCTCTAAGGGGACAAGTGGAGCTCC
2._GC-05-119-3-21
TTCCCTCTAAGGGGACAAGTGGAGCTCC
3._GC-05-119-3-21
TTCCCTCTAAGGGGACAAGTGGAGCTCC
4._GC-05-119-3-21
TTCCCTCT__GGGGACAAGTGGAGCTCC
5._MO_9
__CC__CTAAGG__ACAAGTGG______
6._MO_9
__CC__CTAAGG__ACAAGTGG______
7._MO_9
__CC__CTAAGG__ACAAGTGG______
8._MO_9
__CC__CTAAGG__ACAAGTGG______
9._MO_9
__CC__CT__GG__ACAAGTGG______
10._MO_9
______CTACGG__ACAAGTGG______
11._IMC_41
__CC__CCAAGG__ACAAGTGG______
12._IMC_41
__CC__CCAAGG__ACAAGTGG______
13._IMC_41
__CC__CC__GG__ACAAGTGG______
14._IMC_41
__CC__CC__GG__ACAAGTGG______
15._IMC_41
__CC__CC__GG__ACAAGTGG______
16._IMC_41
______CCACGG__ACAAGTGG______
17._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
18._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
19._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
20._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
21._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
22._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
23._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
24._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
25._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
26._PA_72_[PER]
__CC__CTAAGG__ACAGGTGG______
27._RUQ_32
__CC__CTACGG__CCAGGTGG______
28._PA_56_[PER]
__CC__CTACGG__CCAGGTGG______
29._GC-08-275-8-47
TTCCCCCC__GGGGACAAGTGGAGCCCC
30._GC-08-275-8-47
TTCCCCCCAAGGGGACAAGTGGAGCCCC
31._GC-08-275-8-47
TTCCCCCCAAGGGGACAAGTGGAGCCCC
32._GC-08-275-8-47
TTCCCCCC__GGGGACAAGTGGAGCCCC
33._GC-08-275-8-47
TTCCCCCC__GGGGACAAGTGGAGCCCC
34._RUQ_1529
TTCCCCCCAC__GGACAAGTGGAG____
35._RUQ_1059
TTCCCTCTAA__GGACAAGGGGAG____
36._PA_56_[PER]
__CC__CTAAGG__CCAGGTGG______
37._PA_56_[PER]
__CC__CTAAGG__CCAGGTGG______
38._PA_56_[PER]
__CC__CTAAGG__CCAGGTGG______
39._PA_56_[PER]
__CC__CTAAGG__CCAGGTGG______
40._PA_72_[PER]
__CC__CTACGG__ACAGGTGG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
AACTCCAGCCACGGCCCGCCTTAATTCT
1._GC-05-071-2-22
AACTCCAGCCACGGCCCGCCTTAATTCT
2._GC-05-119-3-21
AACTCCAGCCACGGCCCGCCTTAATTCT
3._GC-05-119-3-21
AACTCCAGCCACGGCCCGCCTTAATTCT
4._GC-05-119-3-21
AACTCCAGCCACGGCCCGCCTTAATTCT
5._MO_9
AACT__________CCCG______TTCT
6._MO_9
AACT__________CCCG______TTCT
7._MO_9
AACT__________CCCG______TTCT
8._MO_9
AACT__________CCCG______TTCT
9._MO_9
AACT__________CCCG______TTCT
10._MO_9
AACT__________CCCG______TTCT
11._IMC_41
AACT__________AACG______TTCT
12._IMC_41
AACT__________AACG______TTCT
13._IMC_41
AACT__________AACG______TTCT
14._IMC_41
AACT__________AACG______TTCT
15._IMC_41
AACT__________AACG______TTCT
16._IMC_41
AACT__________AACG______TTCT
17._PA_72_[PER]
AACT__________ACGG______TTCT
18._PA_72_[PER]
AACT__________ACGG______TTCT
19._PA_72_[PER]
AACT__________ACGG______TTCT
20._PA_72_[PER]
AACT__________ACGG______TTCT
21._PA_72_[PER]
AACT__________ACGG______TTCT
22._PA_72_[PER]
AACT__________ACGG______TTCT
23._PA_72_[PER]
AACT__________ACGG______TTCT
24._PA_72_[PER]
AACT__________ACGG______TTCT
25._PA_72_[PER]
AACT__________ACGG______TTCT
26._PA_72_[PER]
AACT__________ACGG______TTCT
27._RUQ_32
AACT__________ACCG______TTCT
28._PA_56_[PER]
AACT__________ACCG______TTCT
29._GC-08-275-8-47
AACTACAACCAC__AACGCCTTAATTCT
30._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
31._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
32._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
33._GC-08-275-8-47
AACTACAACCACAGAACGCCTTAATTCT
34._RUQ_1529
______________AACG____AATT__
35._RUQ_1059
______________AAGG____AATT__
36._PA_56_[PER]
GGCT__________ACCG______TTCT
37._PA_56_[PER]
GGCT__________ACCG______TTCT
38._PA_56_[PER]
GGCT__________ACCG______TTCT
39._PA_56_[PER]
GGCT__________ACCG______TTCT
40._PA_72_[PER]
AACT__________ACGG______TTCT
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
1._GC-05-071-2-22
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
2._GC-05-119-3-21
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
3._GC-05-119-3-21
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
4._GC-05-119-3-21
CCCCAACTCCTTTTAAGGX_XX_XX_XX_XX_X
5._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
6._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
7._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
8._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
9._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
10._MO_9
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
11._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
12._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
13._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
14._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
15._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
16._IMC_41
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
17._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
18._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
19._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
20._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
21._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
22._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
23._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
24._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
25._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
26._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
27._RUQ_32
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
28._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
29._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
30._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
31._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
32._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
33._GC-08-275-8-47
CCCCAACCCCTTTTAAGGX_XX_XX_XX_XX_X
34._RUQ_1529
____AACCCCTT______X_XX_XX_XX_XX_X
35._RUQ_1059
____AGCCCCTT______X_XX_XX_XX_XX_X
36._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
37._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
38._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
39._PA_56_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X
40._PA_72_[PER]
CC__AA__CCTTTT____X_XX_XX_XX_XX_X

Input profile: MO_9 GC-05-071-2-22

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 1