SNP Profiles matching PA-7

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCCCGGAACCCCCCCCGGTTCCTT
1._GC-04-030-2-12
AACCCCCCGGAACCCCCCCCGGTTCCTT
2._GC-04-030-2-12
AACCCCCCGGAACCCCCCCCGGTTCCTT
3._GC-04-030-2-12
AACCCCCCGGAACCCCCCCCGGTTCCTT
4._GC-04-030-2-12
AACCCCCCGGAACCCCCCCCGGTTCCTT
5._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
6._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
7._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
8._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
9._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
10._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
11._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
12._PA_7_[PER]
AACCCCCC________CCCCGG__CC__
13._RUQ_113
____CCCC____CC__CC____TTCC__
14._RUQ_113
AACCCCCC________CCCCGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCGGGGCCCCCTAATTGGATAACCGG
1._GC-04-030-2-12
AACCGGGGCCCCCTAATTGGATAACCGG
2._GC-04-030-2-12
AACCGGGGCCCCCTAATTGGATAACCGG
3._GC-04-030-2-12
AACCGGGGCCCCCTAATTGGATAACCGG
4._GC-04-030-2-12
AACCGGGGCCCCCTAATTGGATAACCGG
5._PA_7_[PER]
____GG____CC________ATAA__GG
6._PA_7_[PER]
____GG____CC________ATAA__GG
7._PA_7_[PER]
____GG____CC________ATAA__GG
8._PA_7_[PER]
____GG____CC________ATAA__GG
9._PA_7_[PER]
____GG____CC________ATAA__GG
10._PA_7_[PER]
____GG____CC________ATAA__GG
11._PA_7_[PER]
____GG____CC________ATAA__GG
12._PA_7_[PER]
____GG____CC________ATAA__GG
13._RUQ_113
________CC________GG__AACCGG
14._RUQ_113
____GG____CC________ATAA__GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGTGGGGCCAGGGGGGTAGCCAGCC
1._GC-04-030-2-12
AATTGTGGGGCCAGGGGGGTAGCCAGCC
2._GC-04-030-2-12
AATTGTGGGGCCAGGGGGGTAGCCAGCC
3._GC-04-030-2-12
AATTGTGGGGCCAGGGGGGTAGCCAGCC
4._GC-04-030-2-12
AATTGTGGGGCCAGGGGGGTAGCCAGCC
5._PA_7_[PER]
AA______GG__AGGG____AG______
6._PA_7_[PER]
AA______GG__AGGG____AG______
7._PA_7_[PER]
AA______GG__AGGG____AG______
8._PA_7_[PER]
AA______GG__AGGG____AG______
9._PA_7_[PER]
AA______GG__AGGG____AG______
10._PA_7_[PER]
AA______GG__AGGG____AG______
11._PA_7_[PER]
AA______GG__AGGG____AG______
12._PA_7_[PER]
AA______GG__AGGG____AG______
13._RUQ_113
______GGGGCCAGGG____AGCC____
14._RUQ_113
AA______GG__AGGG____AG______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCTAAGGAACCCCGGAAGGTTCTCT
1._GC-04-030-2-12
GGTTCTAAGGAACCCCGGAAGGTTCTCT
2._GC-04-030-2-12
GGTTCTAAGGAACCCCGGAAGGTTCTCT
3._GC-04-030-2-12
GGTTCTAAGGAACCCCGGAAGGTTCTCT
4._GC-04-030-2-12
GGTTCTAAGGAACCCCGGAAGGTTCTCT
5._PA_7_[PER]
____CT__________________CTCT
6._PA_7_[PER]
____CT__________________CTCT
7._PA_7_[PER]
____CT__________________CTCT
8._PA_7_[PER]
____CT__________________CTCT
9._PA_7_[PER]
____CT__________________CTCT
10._PA_7_[PER]
____CT__________________CTCT
11._PA_7_[PER]
____CT__________________CTCT
12._PA_7_[PER]
____CT__________________CTCT
13._RUQ_113
GGTT____GG____________CTCT__
14._RUQ_113
____CT__________________CTCT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCCCTAAGGGGAAAGGTGGAGCC
1._GC-04-030-2-12
TTGGCCCCCTAAGGGGAAAGGTGGAGCC
2._GC-04-030-2-12
TTGGCCCCCTAAGGGGAAAGGTGGAGCC
3._GC-04-030-2-12
TTGGCCCCCTAAGGGGAAAGGTGGAGCC
4._GC-04-030-2-12
TTGGCCCCCTAAGGGGAAAGGTGGAGCC
5._PA_7_[PER]
____CC__CTAAGG__AAAGGTGG____
6._PA_7_[PER]
____CC__CTAAGG__AAAGGTGG____
7._PA_7_[PER]
____CC__CTAAGG__AAAGGTGG____
8._PA_7_[PER]
____CC__CTAAGG__AAAGGTGG____
9._PA_7_[PER]
____CC__CTAAGG__AAAGGTGG____
10._PA_7_[PER]
____CC__CTACGG__AAAGGTGG____
11._PA_7_[PER]
____CC__CTACGG__AAAGGTGG____
12._PA_7_[PER]
____CC__CTACGG__AAAGGTGG____
13._RUQ_113
TTGGCCCCCTAC__GGAAAGGTGGAG__
14._RUQ_113
____CC__CTACGG__AAAGGTGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CGAGCCACAGACACAGAACGCCAAAATT
1._GC-04-030-2-12
CGAGCCACAGACACAGAACGCCAAAATT
2._GC-04-030-2-12
CGAGCCACAGACACAGAACGCCAAAATT
3._GC-04-030-2-12
CGAGCCACAGACACAGAACGCCAAAATT
4._GC-04-030-2-12
CGAGCCACAGACACAGAACGCCAAAATT
5._PA_7_[PER]
__AGCC__________AACG______TT
6._PA_7_[PER]
__AGCC__________AACG______TT
7._PA_7_[PER]
__AGCC__________AACG______TT
8._PA_7_[PER]
__AGCC__________AACG______TT
9._PA_7_[PER]
__AGCC__________AACG______TT
10._PA_7_[PER]
__AGCC__________AACG______TT
11._PA_7_[PER]
__AGCC__________AACG______TT
12._PA_7_[PER]
__AGCC__________AACG______TT
13._RUQ_113
________________AACG____AATT
14._RUQ_113
__AACC__________AACG______TT
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CCCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
1._GC-04-030-2-12
CCCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
2._GC-04-030-2-12
CCCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
3._GC-04-030-2-12
CCCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
4._GC-04-030-2-12
CCCCCTAACCCCTTTTAAGGX_XX_XX_XX_X
5._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
6._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
7._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
8._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
9._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
10._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
11._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
12._PA_7_[PER]
CCCC__AA__CCTTTT____X_XX_XX_XX_X
13._RUQ_113
______AACCCCTT______X_XX_XX_XX_X
14._RUQ_113
CCCC__AA__CCTTTT____X_XX_XX_XX_X

Input profile: PA_7_[PER] GC-04-030-2-12

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3