SNP Profiles matching NA 286

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCAAGGGGCCCCCCCCGGTTCCTT
1._NA_286___
AAAACCAAGGGGCCCCCCCCGGTTCCTT
2._NA_286___
AAAACCAA________CCCCGG__CC__
3._NA_286___
AAAACCAA________CCCCGG__CC__
4._NA_286___
AAACCCAA________CCCCGG__CC__
5._NA_149___
____CCAA____TT__CC____TTCC__
6._NA_702___
____CCAA____TT__CC____TTCC__
7._NA_756___
____CTAA____TT__CC____TTCC__
8._POUND_5_/C___
AA__CTAAGGGGCCCCCCCCGGTTCCTT
9._POUND_5_/C___
AA__CTAAGGGGCCCCCCCCGGTTCCTT
10._POUND_5_/C___
AA__CTAAGGGGCCCCCCCCGGTTCCTT
11._POUND_5_/C___
AA__CTAAGGGGCCCCCCCCGGTTCCTT
12._CRU_70___
____CTAA____TT__CC____TTCC__
13._POUND_5_/C___
AA__CTAA________CCCCGG__CC__
14._POUND_5_/C___
AA__CTAA________CCCCGG__CC__
15._POUND_5_/C___
AA__CTAA________CCCCGG__CC__
16._POUND_5_/C___
AA__CTAA________CCCCGG__CC__
17._CRU_100___
______AA____TT__CC____TTCC__
18._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
19._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
20._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
21._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
22._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
23._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
24._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
25._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
26._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
27._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
28._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
29._POUND_2_/A___
AAAATTAAGGGGCCCCCCCCGGTTCCTT
30._POUND_2_/A___
AAAATTAA________CCCCGG__CC__
31._POUND_25_/A___
AAAATTAA________CCCCGG__CC__
32._EET_400_[ECU]___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
33._EET_400_[ECU]___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
34._EET_400_[ECU]___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
35._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
36._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
37._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
38._EET_400_[ECU]___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
39._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
40._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
41._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
42._POUND_10_/B___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
43._POUND_5_/C___
AACCCTAA________CCCCGG__CC__
44._EET_400_[ECU]___
AA__CCAAGGGGCCCCCCCCGGTTTTTT
45._IMC_27___
____TTAA____TT__CC____TTCC__
46._NA_710___
____TTAA____TT__CC____TTCC__
47._MARPER_38___
AAAACT____________CCGG__CC__
48._NA_916___
____TTAA____TT__CC____TTCC__
49._NA_232___
____TTAA____TT__CC____TTCC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAAAGGCCGGTTAATTGGTTAACCGG
1._NA_286___
AAAAAAGGCCGGTTAATTGGTTAACCGG
2._NA_286___
____AA____GG________TTAA__GG
3._NA_286___
____AA____GG________TTAA__GG
4._NA_286___
____AA____GG________TTAA__GG
5._NA_149___
________CC________GG__AACCGG
6._NA_702___
________CC________GG__AACCGG
7._NA_756___
________CC________GG__AACCGG
8._POUND_5_/C___
AAAAGGGGCCGGCTAATTGGTTAACCGG
9._POUND_5_/C___
AAAAGGGGCCGGCTAATTGGTTAACCGG
10._POUND_5_/C___
AAAAGGGGCCGGCTAATTGGTTAACCGG
11._POUND_5_/C___
AAAAGGGGCCGGCTAATTGGTTAACCGG
12._CRU_70___
________CC________GG__AACCGG
13._POUND_5_/C___
____GG____GG________TTAA__GG
14._POUND_5_/C___
____GG____GG________TTAA__GG
15._POUND_5_/C___
____GG____GG________TTAA__GG
16._POUND_5_/C___
____GG____GG________TTAA__GG
17._CRU_100___
________CC________GG__AACCCG
18._POUND_2_/A___
____AG____GG________TTAA__GG
19._POUND_2_/A___
____AG____GG________TTAA__GG
20._POUND_2_/A___
____AG____GG________TTAA__GG
21._POUND_2_/A___
____AG____GG________TTAA__GG
22._POUND_2_/A___
____AG____GG________TTAA__GG
23._POUND_2_/A___
____AG____GG________TTAA__GG
24._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
25._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
26._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
27._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
28._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
29._POUND_2_/A___
AAAAAGGGCCGGCCAATTGGTTAACCGG
30._POUND_2_/A___
____AG____GG________TTAA__GG
31._POUND_25_/A___
____AG____GG________TTAA__GG
32._EET_400_[ECU]___
AAAAGGGGCCGGTTAATTGGTTAACCCG
33._EET_400_[ECU]___
AAAAGGGGCCGGTTAATTGGTTAACCCG
34._EET_400_[ECU]___
AAAAGGGGCCGGTTAATTGGTTAACCCG
35._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
36._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
37._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
38._EET_400_[ECU]___
AAAAGGGGCCGGTTAATTGGTTAACCCG
39._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
40._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
41._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
42._POUND_10_/B___
AAAAGGGGCCGGTTAATTGGTTAACCCG
43._POUND_5_/C___
____GG____GG________TTAA__GG
44._EET_400_[ECU]___
AAAAGGGGCCGGTTAATTGGTTAACCCG
45._IMC_27___
________CC________GG__AACCGG
46._NA_710___
________CC________GG__AACCGG
47._MARPER_38___
____AGTT__GG________TT______
48._NA_916___
________CC________GG__AACCCG
49._NA_232___
________CC________GG__AACCGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGGGGGCCGGGGGGTTAACCGGCC
1._NA_286___
AATTGGGGGGCCGGGGGGTTAACCGGCC
2._NA_286___
AA______GG__GGGG____AA______
3._NA_286___
AA______GG__GGGG____AA______
4._NA_286___
AA______GG__GGGG____AA______
5._NA_149___
______GGGGCCGGGG____AACC____
6._NA_702___
______GGGGCCGGGG____AACC____
7._NA_756___
______GGGGCCGGGG____AACC____
8._POUND_5_/C___
AATTGGGGGGCCGGGGGGTTAACCGGCC
9._POUND_5_/C___
AATTGGGGGGCCGGGGGGTTAACCGGCC
10._POUND_5_/C___
AATTGGGGGGCCGGGGGGTTAACCGGCC
11._POUND_5_/C___
AATTGGGGGG__GGGGGGTTAACCGGCC
12._CRU_70___
______GGGGCCGGGG____AACC____
13._POUND_5_/C___
AA______GG__GGGG____AA______
14._POUND_5_/C___
AA______GG__GGGG____AA______
15._POUND_5_/C___
AA______GG__GGGG____AA______
16._POUND_5_/C___
AA______GG__GGGG____AA______
17._CRU_100___
______GGGGCCGGGG____AACC____
18._POUND_2_/A___
AA______GG__GGGG____AA______
19._POUND_2_/A___
AA______GG__GGGG____AA______
20._POUND_2_/A___
AA______GG__GGGG____AA______
21._POUND_2_/A___
AA______GG__GGGG____AA______
22._POUND_2_/A___
AA______GG__GGGG____AA______
23._POUND_2_/A___
AA______GG__GGGG____AA______
24._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
25._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
26._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
27._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
28._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
29._POUND_2_/A___
AATTGGGGGGCCGGGGGGTTAACCGGCC
30._POUND_2_/A___
AA______GG__GGGG____AA______
31._POUND_25_/A___
AA______GG__GGGG____AA______
32._EET_400_[ECU]___
AATTGGGGGGCCGGGGGGTTAACCGGCC
33._EET_400_[ECU]___
AATTGGGGGGCCGGGGGGTTAACCGGCC
34._EET_400_[ECU]___
AATTGGGGGGCCGGGGGGTTAACCGGCC
35._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
36._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
37._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
38._EET_400_[ECU]___
AATTGGGGGGCCGGGGGGTTAACCGGCC
39._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
40._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
41._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
42._POUND_10_/B___
AATTGGGGGGCCGGGGGGTTAACCGGCC
43._POUND_5_/C___
AA______GG__GGGG____AA______
44._EET_400_[ECU]___
AATTGGGGGGCCGGGGGGTTAACCGGCC
45._IMC_27___
______GGGGCCAGGG____AACC____
46._NA_710___
______GGGGCCAGGG____AACC____
47._MARPER_38___
AA______GG__GGGG____AA______
48._NA_916___
______GGGGCCGGGG____AACC____
49._NA_232___
______GGGGCCAGGG____AACC____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTTTAAGGAACCCCGGAAGGTTCCCC
1._NA_286___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
2._NA_286___
____TT__________________CCCC
3._NA_286___
____TT__________________CCCC
4._NA_286___
____TT__________________CCCC
5._NA_149___
GGTT____GG____________TTCC__
6._NA_702___
GGTT____GG____________TTCC__
7._NA_756___
GGTT____GG____________TTCC__
8._POUND_5_/C___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
9._POUND_5_/C___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
10._POUND_5_/C___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
11._POUND_5_/C___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
12._CRU_70___
GGTT____GG____________TTCC__
13._POUND_5_/C___
____TT__________________CCCC
14._POUND_5_/C___
____TT__________________CCCC
15._POUND_5_/C___
____TT__________________CCCC
16._POUND_5_/C___
____TT__________________CCCC
17._CRU_100___
GGTT____GG____________TTCC__
18._POUND_2_/A___
____TT__________________CCCC
19._POUND_2_/A___
____TT__________________CCCC
20._POUND_2_/A___
____TT__________________CCCC
21._POUND_2_/A___
____TT__________________CCCC
22._POUND_2_/A___
____TT__________________CCCC
23._POUND_2_/A___
____TT__________________CCCC
24._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
25._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
26._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
27._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
28._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
29._POUND_2_/A___
GGTTTTAAGGAACCCCGGGGGGTTCCCC
30._POUND_2_/A___
____TT__________________CCCC
31._POUND_25_/A___
____TT__________________CCCC
32._EET_400_[ECU]___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
33._EET_400_[ECU]___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
34._EET_400_[ECU]___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
35._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
36._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
37._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
38._EET_400_[ECU]___
GGTTTTAAGGAACCCCGGAAGGTT__CC
39._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
40._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
41._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
42._POUND_10_/B___
GGTTTTAAGGAACCCCGGAAGGTTCCCC
43._POUND_5_/C___
____TT__________________CCCC
44._EET_400_[ECU]___
GGTTTTAAGGAACCCCGGAAGGTTCTCC
45._IMC_27___
GGTT____GG____________TTCC__
46._NA_710___
GGTT____GG____________TTCC__
47._MARPER_38___
____TT____________________CC
48._NA_916___
GGTT____GG____________TTCC__
49._NA_232___
GGTT____GG____________TTCC__
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
1._NA_286___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
2._NA_286___
____CC__TTAAGG__CCAAGGGG____
3._NA_286___
____CC__TTAAGG__CCAAGGGG____
4._NA_286___
____CC__TTAAGG__CCAAGGGG____
5._NA_149___
TTGGCCCCTTAA__GGCCAAGGGGGG__
6._NA_702___
TT__CCCCTTAA__GGCCAAGGGGGG__
7._NA_756___
TT__CCCCTTAA__GGCCAAGGGGGG__
8._POUND_5_/C___
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
9._POUND_5_/C___
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
10._POUND_5_/C___
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
11._POUND_5_/C___
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
12._CRU_70___
TT__CCCCTTAA__GGCCAAGGGGGG__
13._POUND_5_/C___
____CC__TTAAGG__CCAGGGGG____
14._POUND_5_/C___
____CC__TTAAGG__CCAGGGGG____
15._POUND_5_/C___
____CC__TTAAGG__CCAGGGGG____
16._POUND_5_/C___
____CC__TTAAGG__CCAGGGGG____
17._CRU_100___
TTGGCCCCTTAA__GGCCAAGGGGGG__
18._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
19._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
20._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
21._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
22._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
23._POUND_2_/A___
____CC__TTAAGG__CCAAGGGG____
24._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
25._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
26._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
27._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
28._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
29._POUND_2_/A___
TTGGCCCCTTAAGGGGCCAAGGGGGG__
30._POUND_2_/A___
________TTAAGG__CCAAGGGG____
31._POUND_25_/A___
________TTAAGG__CCAAGGGG____
32._EET_400_[ECU]___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
33._EET_400_[ECU]___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
34._EET_400_[ECU]___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
35._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
36._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
37._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
38._EET_400_[ECU]___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
39._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
40._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
41._POUND_10_/B___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
42._POUND_10_/B___
__GGCCCCTTAAGGGGAAGGTTGGGGTT
43._POUND_5_/C___
________TTAAGG__CCAGGGGG____
44._EET_400_[ECU]___
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
45._IMC_27___
TT__CCCCTTAA__GGCCAGGGGGGG__
46._NA_710___
TT__CCCCTTAA__GGCCAAGGGGGG__
47._MARPER_38___
________TT________AA__GG____
48._NA_916___
TTGGCCCCTTAA__GGCCAGGGGGGG__
49._NA_232___
TT__CCCCTTAA__GGCCAAGGGGGG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACCACAACCCCAACCGGCCAACCCC
1._NA_286___
CCAACCACAACCCCAACCGGCCAACCCC
2._NA_286___
__AACC__________CCGG______CC
3._NA_286___
__AACC__________CCGG______CC
4._NA_286___
__AACC__________CCGG______CC
5._NA_149___
________________CCGG____CCCC
6._NA_702___
________________CCGG____CCCC
7._NA_756___
________________CCGG____CCCC
8._POUND_5_/C___
CCAACCAAAACCACAACCGGCCAACCCC
9._POUND_5_/C___
CCAACCAAAACCACAACCGGCCAACCCC
10._POUND_5_/C___
CCAACCAAAACCACAACCGGCC__CCCC
11._POUND_5_/C___
CCAACCAAAACCACAACCGGCCAACCCC
12._CRU_70___
________________CCCG____CCCC
13._POUND_5_/C___
__AACC__________CCGG______CC
14._POUND_5_/C___
__AACC__________CCGG______CC
15._POUND_5_/C___
__AACC__________CCGG______CC
16._POUND_5_/C___
__AACC__________CCGG______CC
17._CRU_100___
________________CCCC____CCCC
18._POUND_2_/A___
__AACC__________CCCC______CC
19._POUND_2_/A___
__AACC__________CCCC______CC
20._POUND_2_/A___
__AACC__________CCCC______CC
21._POUND_2_/A___
__AACC__________CCCC______CC
22._POUND_2_/A___
__AACC__________CCCC______CC
23._POUND_2_/A___
__AACC__________CCCC______CC
24._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
25._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
26._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
27._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
28._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
29._POUND_2_/A___
CCAACCCCAACCAAAACCCCCCAACCCC
30._POUND_2_/A___
__AACC__________CCCC______CC
31._POUND_25_/A___
__AACC__________CCCC______CC
32._EET_400_[ECU]___
CCAATTAAAACCCCAACCGGCCAACCCC
33._EET_400_[ECU]___
CCAATTAAAACCCCAACCGGCCAACCCC
34._EET_400_[ECU]___
CCAATTAAAACCCCAACCGGCCAACCCC
35._POUND_10_/B___
CCAATTAAAACCCCAACCGGCCAACCCC
36._POUND_10_/B___
CCAATTAAAACCCCAACCGGCCAACCCC
37._POUND_10_/B___
CCAATTAAAACCCCAACCGGCCAACCCC
38._EET_400_[ECU]___
CCAATTAAAACCCCAACCGGCCAACCCC
39._POUND_10_/B___
CCAATTAAAACCCCAACCGGCCAACCCC
40._POUND_10_/B___
CCAATTAA__CCCCAACCGGCCAACCCC
41._POUND_10_/B___
CCAATTAAAACCCCAACCGGCCAACCCC
42._POUND_10_/B___
CCAATTAAAACCCCAACCGGCC__CCCC
43._POUND_5_/C___
__AACC__________CCGG______CC
44._EET_400_[ECU]___
CCAATTAAAACCCCAACCGGCCAACCCC
45._IMC_27___
________________CCCG____CCCC
46._NA_710___
________________CCCG____ACCC
47._MARPER_38___
__AA____________CCCG______CC
48._NA_916___
________________CCCC____CCCC
49._NA_232___
________________CCCC____ACCC
 85 86 87 88 89 90 91 92 93      
_Input profile
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
1._NA_286___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
2._NA_286___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
3._NA_286___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
4._NA_286___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
5._NA_149___
______AACCCC______X_XX_XX_XX_XX_X
6._NA_702___
______AACCCC______X_XX_XX_XX_XX_X
7._NA_756___
______AACCCC______X_XX_XX_XX_XX_X
8._POUND_5_/C___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
9._POUND_5_/C___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
10._POUND_5_/C___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
11._POUND_5_/C___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
12._CRU_70___
______AACCCC______X_XX_XX_XX_XX_X
13._POUND_5_/C___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
14._POUND_5_/C___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
15._POUND_5_/C___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
16._POUND_5_/C___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
17._CRU_100___
______AACCCC______X_XX_XX_XX_XX_X
18._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
19._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
20._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
21._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
22._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
23._POUND_2_/A___
TTCC__AA__CCTT____X_XX_XX_XX_XX_X
24._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
25._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
26._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
27._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
28._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
29._POUND_2_/A___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
30._POUND_2_/A___
TT____AA__CCTT____X_XX_XX_XX_XX_X
31._POUND_25_/A___
TT____AA__CCTT____X_XX_XX_XX_XX_X
32._EET_400_[ECU]___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
33._EET_400_[ECU]___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
34._EET_400_[ECU]___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
35._POUND_10_/B___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
36._POUND_10_/B___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
37._POUND_10_/B___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
38._EET_400_[ECU]___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
39._POUND_10_/B___
TTCCTTAACCCC__TTGGX_XX_XX_XX_XX_X
40._POUND_10_/B___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
41._POUND_10_/B___
TTCCTTAA__CCTTTTGGX_XX_XX_XX_XX_X
42._POUND_10_/B___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
43._POUND_5_/C___
TT____AA__CCTT____X_XX_XX_XX_XX_X
44._EET_400_[ECU]___
TTCCTTAACCCCTTTTGGX_XX_XX_XX_XX_X
45._IMC_27___
______AACCCC______X_XX_XX_XX_XX_X
46._NA_710___
______AACCCC______X_XX_XX_XX_XX_X
47._MARPER_38___
TT____AA__CC______X_XX_XX_XX_XX_X
48._NA_916___
______AACCCC______X_XX_XX_XX_XX_X
49._NA_232___
______AACCCC______X_XX_XX_XX_XX_X

Input profile: NA_286 GC-01-101-5-18

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

1._NA_286 GC-01-101-5-18

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

2._NA_286

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1518 4 > FP
 Dapeng Zhang, 2016

3._NA_286

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1518 11 > F
 Dapeng Zhang, 2016

4._NA_286

98.7 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5B F511 T4
 Dapeng Zhang, 2016

5._NA_149 RUQ_801

97.6 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

6._NA_702 RUQ_1587

97.6 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

7._NA_756 RUQ_468

96.3 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

8._POUND_5_/C GC-08-165-4-08

96.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._POUND_5_/C GC-08-165-4-08

96.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

10._POUND_5_/C GC-08-165-4-08

96.2 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._POUND_5_/C GC-08-165-4-08

96.2 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._CRU_70 RUQ_897

95.1 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

13._POUND_5_/C

94.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 4
 Dapeng Zhang, 2016

14._POUND_5_/C

94.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 5
 Dapeng Zhang, 2016

15._POUND_5_/C

94.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 6
 Dapeng Zhang, 2016

16._POUND_5_/C

94.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 11
 Dapeng Zhang, 2016

17._CRU_100 RUQ_877

93.9 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

18._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 1
 Dapeng Zhang, 2016

19._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 2
 Dapeng Zhang, 2016

20._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 11
 Dapeng Zhang, 2016

21._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 4 > FP
 Dapeng Zhang, 2016

22._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 7 > FP
 Dapeng Zhang, 2016

23._POUND_2_/A

93.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 9 > FP
 Dapeng Zhang, 2016

24._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

25._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

26._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

27._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

28._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

29._POUND_2_/A GC-01-093-5-10

93.5 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

30._POUND_2_/A

93.2 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A75 T3
 Dapeng Zhang, 2016

31._POUND_25_/A

93.2 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F406 T5
 Dapeng Zhang, 2016

32._EET_400_[ECU] GC-01-066-4-02

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

33._EET_400_[ECU] GC-01-066-4-02

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

34._EET_400_[ECU] GC-01-066-4-02

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

35._POUND_10_/B GC-01-115-6-12

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

36._POUND_10_/B GC-01-115-6-12

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

37._POUND_10_/B GC-08-162-4-05

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

38._EET_400_[ECU] GC-01-066-4-02

92.3 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

39._POUND_10_/B GC-01-115-6-12

92.3 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

40._POUND_10_/B GC-01-115-6-12

92.3 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

41._POUND_10_/B GC-08-163-4-06

92.3 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

42._POUND_10_/B GC-08-163-4-06

92.2 %
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

43._POUND_5_/C

91.9 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A77 T10
 Dapeng Zhang, 2016

44._EET_400_[ECU] GC-01-066-4-02

91.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

45._IMC_27 RUQ_515

91.5 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

46._NA_710 RUQ_1588

91.5 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._MARPER_38

90.7 %
27 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 167
 Dapeng Zhang, 2014

48._NA_916 RUQ_1334

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

49._NA_232 RUQ_1504

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1414 92TcSNP154 93TcSNP240