SNP Profiles matching NA 286

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 Key

 1234567891011121314
_Input profile
AAAACCAAGGGGCCCCCCCCGGTTCCTT
1._GC-01-101-5-18
AAAACCAAGGGGCCCCCCCCGGTTCCTT
2._NA_286
AAAACCAA________CCCCGG__CC__
3._NA_286
AAAACCAA________CCCCGG__CC__
4._NA_286
AAACCCAA________CCCCGG__CC__
5._RUQ_801
____CCAA____TT__CC____TTCC__
6._RUQ_1587
____CCAA____TT__CC____TTCC__
7._RUQ_468
____CTAA____TT__CC____TTCC__
8._GC-08-165-4-08
AA__CTAAGGGGCCCCCCCCGGTTCCTT
9._GC-08-165-4-08
AA__CTAAGGGGCCCCCCCCGGTTCCTT
10._GC-08-165-4-08
AA__CTAAGGGGCCCCCCCCGGTTCCTT
11._GC-08-165-4-08
AA__CTAAGGGGCCCCCCCCGGTTCCTT
12._RUQ_897
____CTAA____TT__CC____TTCC__
13._POUND_5_/C
AA__CTAA________CCCCGG__CC__
14._POUND_5_/C
AA__CTAA________CCCCGG__CC__
15._POUND_5_/C
AA__CTAA________CCCCGG__CC__
16._POUND_5_/C
AA__CTAA________CCCCGG__CC__
17._RUQ_877
______AA____TT__CC____TTCC__
18._POUND_2_/A
AAAATTAA________CCCCGG__CC__
19._POUND_2_/A
AAAATTAA________CCCCGG__CC__
20._POUND_2_/A
AAAATTAA________CCCCGG__CC__
21._POUND_2_/A
AAAATTAA________CCCCGG__CC__
22._POUND_2_/A
AAAATTAA________CCCCGG__CC__
23._POUND_2_/A
AAAATTAA________CCCCGG__CC__
24._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
25._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
26._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
27._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
28._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
29._GC-01-093-5-10
AAAATTAAGGGGCCCCCCCCGGTTCCTT
30._POUND_2_/A
AAAATTAA________CCCCGG__CC__
31._POUND_25_/A
AAAATTAA________CCCCGG__CC__
32._GC-01-066-4-02
AA__CCAAGGGGCCCCCCCCGGTTTTTT
33._GC-01-066-4-02
AA__CCAAGGGGCCCCCCCCGGTTTTTT
34._GC-01-066-4-02
AA__CCAAGGGGCCCCCCCCGGTTTTTT
35._GC-01-115-6-12
AA__CCAAGGGGCCCCCCCCGGTTTTTT
36._GC-01-115-6-12
AA__CCAAGGGGCCCCCCCCGGTTTTTT
37._GC-08-162-4-05
AA__CCAAGGGGCCCCCCCCGGTTTTTT
38._GC-01-066-4-02
AA__CCAAGGGGCCCCCCCCGGTTTTTT
39._GC-01-115-6-12
AA__CCAAGGGGCCCCCCCCGGTTTTTT
40._GC-01-115-6-12
AA__CCAAGGGGCCCCCCCCGGTTTTTT
41._GC-08-163-4-06
AA__CCAAGGGGCCCCCCCCGGTTTTTT
42._GC-08-163-4-06
AA__CCAAGGGGCCCCCCCCGGTTTTTT
43._POUND_5_/C
AACCCTAA________CCCCGG__CC__
44._GC-01-066-4-02
AA__CCAAGGGGCCCCCCCCGGTTTTTT
45._RUQ_515
____TTAA____TT__CC____TTCC__
46._RUQ_1588
____TTAA____TT__CC____TTCC__
47._MARPER_38
AAAACT____________CCGG__CC__
48._RUQ_1334
____TTAA____TT__CC____TTCC__
49._RUQ_1504
____TTAA____TT__CC____TTCC__
 1516171819202122232425262728
_Input profile
AAAAAAGGCCGGTTAATTGGTTAACCGG
1._GC-01-101-5-18
AAAAAAGGCCGGTTAATTGGTTAACCGG
2._NA_286
____AA____GG________TTAA__GG
3._NA_286
____AA____GG________TTAA__GG
4._NA_286
____AA____GG________TTAA__GG
5._RUQ_801
________CC________GG__AACCGG
6._RUQ_1587
________CC________GG__AACCGG
7._RUQ_468
________CC________GG__AACCGG
8._GC-08-165-4-08
AAAAGGGGCCGGCTAATTGGTTAACCGG
9._GC-08-165-4-08
AAAAGGGGCCGGCTAATTGGTTAACCGG
10._GC-08-165-4-08
AAAAGGGGCCGGCTAATTGGTTAACCGG
11._GC-08-165-4-08
AAAAGGGGCCGGCTAATTGGTTAACCGG
12._RUQ_897
________CC________GG__AACCGG
13._POUND_5_/C
____GG____GG________TTAA__GG
14._POUND_5_/C
____GG____GG________TTAA__GG
15._POUND_5_/C
____GG____GG________TTAA__GG
16._POUND_5_/C
____GG____GG________TTAA__GG
17._RUQ_877
________CC________GG__AACCCG
18._POUND_2_/A
____AG____GG________TTAA__GG
19._POUND_2_/A
____AG____GG________TTAA__GG
20._POUND_2_/A
____AG____GG________TTAA__GG
21._POUND_2_/A
____AG____GG________TTAA__GG
22._POUND_2_/A
____AG____GG________TTAA__GG
23._POUND_2_/A
____AG____GG________TTAA__GG
24._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
25._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
26._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
27._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
28._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
29._GC-01-093-5-10
AAAAAGGGCCGGCCAATTGGTTAACCGG
30._POUND_2_/A
____AG____GG________TTAA__GG
31._POUND_25_/A
____AG____GG________TTAA__GG
32._GC-01-066-4-02
AAAAGGGGCCGGTTAATTGGTTAACCCG
33._GC-01-066-4-02
AAAAGGGGCCGGTTAATTGGTTAACCCG
34._GC-01-066-4-02
AAAAGGGGCCGGTTAATTGGTTAACCCG
35._GC-01-115-6-12
AAAAGGGGCCGGTTAATTGGTTAACCCG
36._GC-01-115-6-12
AAAAGGGGCCGGTTAATTGGTTAACCCG
37._GC-08-162-4-05
AAAAGGGGCCGGTTAATTGGTTAACCCG
38._GC-01-066-4-02
AAAAGGGGCCGGTTAATTGGTTAACCCG
39._GC-01-115-6-12
AAAAGGGGCCGGTTAATTGGTTAACCCG
40._GC-01-115-6-12
AAAAGGGGCCGGTTAATTGGTTAACCCG
41._GC-08-163-4-06
AAAAGGGGCCGGTTAATTGGTTAACCCG
42._GC-08-163-4-06
AAAAGGGGCCGGTTAATTGGTTAACCCG
43._POUND_5_/C
____GG____GG________TTAA__GG
44._GC-01-066-4-02
AAAAGGGGCCGGTTAATTGGTTAACCCG
45._RUQ_515
________CC________GG__AACCGG
46._RUQ_1588
________CC________GG__AACCGG
47._MARPER_38
____AGTT__GG________TT______
48._RUQ_1334
________CC________GG__AACCCG
49._RUQ_1504
________CC________GG__AACCGG
 2930313233343536373839404142
_Input profile
AATTGGGGGGCCGGGGGGTTAACCGGCC
1._GC-01-101-5-18
AATTGGGGGGCCGGGGGGTTAACCGGCC
2._NA_286
AA______GG__GGGG____AA______
3._NA_286
AA______GG__GGGG____AA______
4._NA_286
AA______GG__GGGG____AA______
5._RUQ_801
______GGGGCCGGGG____AACC____
6._RUQ_1587
______GGGGCCGGGG____AACC____
7._RUQ_468
______GGGGCCGGGG____AACC____
8._GC-08-165-4-08
AATTGGGGGGCCGGGGGGTTAACCGGCC
9._GC-08-165-4-08
AATTGGGGGGCCGGGGGGTTAACCGGCC
10._GC-08-165-4-08
AATTGGGGGGCCGGGGGGTTAACCGGCC
11._GC-08-165-4-08
AATTGGGGGG__GGGGGGTTAACCGGCC
12._RUQ_897
______GGGGCCGGGG____AACC____
13._POUND_5_/C
AA______GG__GGGG____AA______
14._POUND_5_/C
AA______GG__GGGG____AA______
15._POUND_5_/C
AA______GG__GGGG____AA______
16._POUND_5_/C
AA______GG__GGGG____AA______
17._RUQ_877
______GGGGCCGGGG____AACC____
18._POUND_2_/A
AA______GG__GGGG____AA______
19._POUND_2_/A
AA______GG__GGGG____AA______
20._POUND_2_/A
AA______GG__GGGG____AA______
21._POUND_2_/A
AA______GG__GGGG____AA______
22._POUND_2_/A
AA______GG__GGGG____AA______
23._POUND_2_/A
AA______GG__GGGG____AA______
24._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
25._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
26._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
27._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
28._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
29._GC-01-093-5-10
AATTGGGGGGCCGGGGGGTTAACCGGCC
30._POUND_2_/A
AA______GG__GGGG____AA______
31._POUND_25_/A
AA______GG__GGGG____AA______
32._GC-01-066-4-02
AATTGGGGGGCCGGGGGGTTAACCGGCC
33._GC-01-066-4-02
AATTGGGGGGCCGGGGGGTTAACCGGCC
34._GC-01-066-4-02
AATTGGGGGGCCGGGGGGTTAACCGGCC
35._GC-01-115-6-12
AATTGGGGGGCCGGGGGGTTAACCGGCC
36._GC-01-115-6-12
AATTGGGGGGCCGGGGGGTTAACCGGCC
37._GC-08-162-4-05
AATTGGGGGGCCGGGGGGTTAACCGGCC
38._GC-01-066-4-02
AATTGGGGGGCCGGGGGGTTAACCGGCC
39._GC-01-115-6-12
AATTGGGGGGCCGGGGGGTTAACCGGCC
40._GC-01-115-6-12
AATTGGGGGGCCGGGGGGTTAACCGGCC
41._GC-08-163-4-06
AATTGGGGGGCCGGGGGGTTAACCGGCC
42._GC-08-163-4-06
AATTGGGGGGCCGGGGGGTTAACCGGCC
43._POUND_5_/C
AA______GG__GGGG____AA______
44._GC-01-066-4-02
AATTGGGGGGCCGGGGGGTTAACCGGCC
45._RUQ_515
______GGGGCCAGGG____AACC____
46._RUQ_1588
______GGGGCCAGGG____AACC____
47._MARPER_38
AA______GG__GGGG____AA______
48._RUQ_1334
______GGGGCCGGGG____AACC____
49._RUQ_1504
______GGGGCCAGGG____AACC____
 4344454647484950515253545556
_Input profile
GGTTTTAAGGAACCCCGGAAGGTTCCCC
1._GC-01-101-5-18
GGTTTTAAGGAACCCCGGAAGGTTCCCC
2._NA_286
____TT__________________CCCC
3._NA_286
____TT__________________CCCC
4._NA_286
____TT__________________CCCC
5._RUQ_801
GGTT____GG____________TTCC__
6._RUQ_1587
GGTT____GG____________TTCC__
7._RUQ_468
GGTT____GG____________TTCC__
8._GC-08-165-4-08
GGTTTTAAGGAACCCCGGAAGGTTCCCC
9._GC-08-165-4-08
GGTTTTAAGGAACCCCGGAAGGTTCCCC
10._GC-08-165-4-08
GGTTTTAAGGAACCCCGGAAGGTTCCCC
11._GC-08-165-4-08
GGTTTTAAGGAACCCCGGAAGGTTCCCC
12._RUQ_897
GGTT____GG____________TTCC__
13._POUND_5_/C
____TT__________________CCCC
14._POUND_5_/C
____TT__________________CCCC
15._POUND_5_/C
____TT__________________CCCC
16._POUND_5_/C
____TT__________________CCCC
17._RUQ_877
GGTT____GG____________TTCC__
18._POUND_2_/A
____TT__________________CCCC
19._POUND_2_/A
____TT__________________CCCC
20._POUND_2_/A
____TT__________________CCCC
21._POUND_2_/A
____TT__________________CCCC
22._POUND_2_/A
____TT__________________CCCC
23._POUND_2_/A
____TT__________________CCCC
24._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
25._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
26._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
27._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
28._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
29._GC-01-093-5-10
GGTTTTAAGGAACCCCGGGGGGTTCCCC
30._POUND_2_/A
____TT__________________CCCC
31._POUND_25_/A
____TT__________________CCCC
32._GC-01-066-4-02
GGTTTTAAGGAACCCCGGAAGGTTCCCC
33._GC-01-066-4-02
GGTTTTAAGGAACCCCGGAAGGTTCCCC
34._GC-01-066-4-02
GGTTTTAAGGAACCCCGGAAGGTTCCCC
35._GC-01-115-6-12
GGTTTTAAGGAACCCCGGAAGGTTCCCC
36._GC-01-115-6-12
GGTTTTAAGGAACCCCGGAAGGTTCCCC
37._GC-08-162-4-05
GGTTTTAAGGAACCCCGGAAGGTTCCCC
38._GC-01-066-4-02
GGTTTTAAGGAACCCCGGAAGGTT__CC
39._GC-01-115-6-12
GGTTTTAAGGAACCCCGGAAGGTTCCCC
40._GC-01-115-6-12
GGTTTTAAGGAACCCCGGAAGGTTCCCC
41._GC-08-163-4-06
GGTTTTAAGGAACCCCGGAAGGTTCCCC
42._GC-08-163-4-06
GGTTTTAAGGAACCCCGGAAGGTTCCCC
43._POUND_5_/C
____TT__________________CCCC
44._GC-01-066-4-02
GGTTTTAAGGAACCCCGGAAGGTTCTCC
45._RUQ_515
GGTT____GG____________TTCC__
46._RUQ_1588
GGTT____GG____________TTCC__
47._MARPER_38
____TT____________________CC
48._RUQ_1334
GGTT____GG____________TTCC__
49._RUQ_1504
GGTT____GG____________TTCC__
 5758596061626364656667686970
_Input profile
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
1._GC-01-101-5-18
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
2._NA_286
____CC__TTAAGG__CCAAGGGG____
3._NA_286
____CC__TTAAGG__CCAAGGGG____
4._NA_286
____CC__TTAAGG__CCAAGGGG____
5._RUQ_801
TTGGCCCCTTAA__GGCCAAGGGGGG__
6._RUQ_1587
TT__CCCCTTAA__GGCCAAGGGGGG__
7._RUQ_468
TT__CCCCTTAA__GGCCAAGGGGGG__
8._GC-08-165-4-08
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
9._GC-08-165-4-08
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
10._GC-08-165-4-08
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
11._GC-08-165-4-08
TTGGCCCCTTAAGGGGCCAGGGGGGGTT
12._RUQ_897
TT__CCCCTTAA__GGCCAAGGGGGG__
13._POUND_5_/C
____CC__TTAAGG__CCAGGGGG____
14._POUND_5_/C
____CC__TTAAGG__CCAGGGGG____
15._POUND_5_/C
____CC__TTAAGG__CCAGGGGG____
16._POUND_5_/C
____CC__TTAAGG__CCAGGGGG____
17._RUQ_877
TTGGCCCCTTAA__GGCCAAGGGGGG__
18._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
19._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
20._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
21._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
22._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
23._POUND_2_/A
____CC__TTAAGG__CCAAGGGG____
24._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
25._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
26._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
27._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
28._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGGTT
29._GC-01-093-5-10
TTGGCCCCTTAAGGGGCCAAGGGGGG__
30._POUND_2_/A
________TTAAGG__CCAAGGGG____
31._POUND_25_/A
________TTAAGG__CCAAGGGG____
32._GC-01-066-4-02
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
33._GC-01-066-4-02
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
34._GC-01-066-4-02
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
35._GC-01-115-6-12
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
36._GC-01-115-6-12
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
37._GC-08-162-4-05
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
38._GC-01-066-4-02
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
39._GC-01-115-6-12
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
40._GC-01-115-6-12
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
41._GC-08-163-4-06
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
42._GC-08-163-4-06
__GGCCCCTTAAGGGGAAGGTTGGGGTT
43._POUND_5_/C
________TTAAGG__CCAGGGGG____
44._GC-01-066-4-02
TTGGCCCCTTAAGGGGAAGGTTGGGGTT
45._RUQ_515
TT__CCCCTTAA__GGCCAGGGGGGG__
46._RUQ_1588
TT__CCCCTTAA__GGCCAAGGGGGG__
47._MARPER_38
________TT________AA__GG____
48._RUQ_1334
TTGGCCCCTTAA__GGCCAGGGGGGG__
49._RUQ_1504
TT__CCCCTTAA__GGCCAAGGGGGG__
 7172737475767778798081828384
_Input profile
CCAACCACAACCCCAACCGGCCAACCCC
1._GC-01-101-5-18
CCAACCACAACCCCAACCGGCCAACCCC
2._NA_286
__AACC__________CCGG______CC
3._NA_286
__AACC__________CCGG______CC
4._NA_286
__AACC__________CCGG______CC
5._RUQ_801
________________CCGG____CCCC
6._RUQ_1587
________________CCGG____CCCC
7._RUQ_468
________________CCGG____CCCC
8._GC-08-165-4-08
CCAACCAAAACCACAACCGGCCAACCCC
9._GC-08-165-4-08
CCAACCAAAACCACAACCGGCCAACCCC
10._GC-08-165-4-08
CCAACCAAAACCACAACCGGCC__CCCC
11._GC-08-165-4-08
CCAACCAAAACCACAACCGGCCAACCCC
12._RUQ_897
________________CCCG____CCCC
13._POUND_5_/C
__AACC__________CCGG______CC
14._POUND_5_/C
__AACC__________CCGG______CC
15._POUND_5_/C
__AACC__________CCGG______CC
16._POUND_5_/C
__AACC__________CCGG______CC
17._RUQ_877
________________CCCC____CCCC
18._POUND_2_/A
__AACC__________CCCC______CC
19._POUND_2_/A
__AACC__________CCCC______CC
20._POUND_2_/A
__AACC__________CCCC______CC
21._POUND_2_/A
__AACC__________CCCC______CC
22._POUND_2_/A
__AACC__________CCCC______CC
23._POUND_2_/A
__AACC__________CCCC______CC
24._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
25._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
26._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
27._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
28._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
29._GC-01-093-5-10
CCAACCCCAACCAAAACCCCCCAACCCC
30._POUND_2_/A
__AACC__________CCCC______CC
31._POUND_25_/A
__AACC__________CCCC______CC
32._GC-01-066-4-02
CCAATTAAAACCCCAACCGGCCAACCCC
33._GC-01-066-4-02
CCAATTAAAACCCCAACCGGCCAACCCC
34._GC-01-066-4-02
CCAATTAAAACCCCAACCGGCCAACCCC
35._GC-01-115-6-12
CCAATTAAAACCCCAACCGGCCAACCCC
36._GC-01-115-6-12
CCAATTAAAACCCCAACCGGCCAACCCC
37._GC-08-162-4-05
CCAATTAAAACCCCAACCGGCCAACCCC
38._GC-01-066-4-02
CCAATTAAAACCCCAACCGGCCAACCCC
39._GC-01-115-6-12
CCAATTAAAACCCCAACCGGCCAACCCC
40._GC-01-115-6-12
CCAATTAA__CCCCAACCGGCCAACCCC
41._GC-08-163-4-06
CCAATTAAAACCCCAACCGGCCAACCCC
42._GC-08-163-4-06
CCAATTAAAACCCCAACCGGCC__CCCC
43._POUND_5_/C
__AACC__________CCGG______CC
44._GC-01-066-4-02
CCAATTAAAACCCCAACCGGCCAACCCC
45._RUQ_515
________________CCCG____CCCC
46._RUQ_1588
________________CCCG____ACCC
47._MARPER_38
__AA____________CCCG______CC
48._RUQ_1334
________________CCCC____CCCC
49._RUQ_1504
________________CCCC____ACCC
 85868788899091929394    
_Input profile
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
1._GC-01-101-5-18
TTCCTTAACCCC__TTTTGGX_XX_XX_XX_X
2._NA_286
TTCC__AA__CCTTTT____X_XX_XX_XX_X
3._NA_286
TTCC__AA__CC__TT____X_XX_XX_XX_X
4._NA_286
TTCC__AA__CCTTTT____X_XX_XX_XX_X
5._RUQ_801
______AACCCCTT______X_XX_XX_XX_X
6._RUQ_1587
______AACCCCTT______X_XX_XX_XX_X
7._RUQ_468
______AACCCCTT______X_XX_XX_XX_X
8._GC-08-165-4-08
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
9._GC-08-165-4-08
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
10._GC-08-165-4-08
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
11._GC-08-165-4-08
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
12._RUQ_897
______AACCCCTT______X_XX_XX_XX_X
13._POUND_5_/C
TTCC__AA__CCTTTT____X_XX_XX_XX_X
14._POUND_5_/C
TTCC__AA__CCTTTT____X_XX_XX_XX_X
15._POUND_5_/C
TTCC__AA__CCTTTT____X_XX_XX_XX_X
16._POUND_5_/C
TTCC__AA__CCTTTT____X_XX_XX_XX_X
17._RUQ_877
______AACCCCTT______X_XX_XX_XX_X
18._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
19._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
20._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
21._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
22._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
23._POUND_2_/A
TTCC__AA__CCTTTT____X_XX_XX_XX_X
24._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
25._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
26._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
27._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
28._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
29._GC-01-093-5-10
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
30._POUND_2_/A
TT____AA__CCTTTT____X_XX_XX_XX_X
31._POUND_25_/A
TT____AA__CCTTTT____X_XX_XX_XX_X
32._GC-01-066-4-02
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
33._GC-01-066-4-02
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
34._GC-01-066-4-02
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
35._GC-01-115-6-12
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
36._GC-01-115-6-12
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
37._GC-08-162-4-05
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
38._GC-01-066-4-02
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
39._GC-01-115-6-12
TTCCTTAACCCCTT__TTGGX_XX_XX_XX_X
40._GC-01-115-6-12
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
41._GC-08-163-4-06
TTCCTTAA__CCTTTTTTGGX_XX_XX_XX_X
42._GC-08-163-4-06
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
43._POUND_5_/C
TT____AA__CCTTTT____X_XX_XX_XX_X
44._GC-01-066-4-02
TTCCTTAACCCCTTTTTTGGX_XX_XX_XX_X
45._RUQ_515
______AACCCCTT______X_XX_XX_XX_X
46._RUQ_1588
______AACCCCTT______X_XX_XX_XX_X
47._MARPER_38
TT____AA__CC________X_XX_XX_XX_X
48._RUQ_1334
______AACCCCTT______X_XX_XX_XX_X
49._RUQ_1504
______AACCCCTT______X_XX_XX_XX_X

Input profile: NA_286 GC-01-101-5-18

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

1._NA_286 GC-01-101-5-18

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

2._NA_286

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1518 4 > FP
 Dapeng Zhang, 2016

3._NA_286

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1518 11 > F
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

4._NA_286

98.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5B F511 T4
 Dapeng Zhang, 2016

5._NA_149 RUQ_801

97.7 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

6._NA_702 RUQ_1587

97.6 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

7._NA_756 RUQ_468

96.4 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

8._POUND_5_/C GC-08-165-4-08

96.2 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._POUND_5_/C GC-08-165-4-08

96.2 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

10._POUND_5_/C GC-08-165-4-08

96.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._POUND_5_/C GC-08-165-4-08

96.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._CRU_70 RUQ_897

95.2 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

13._POUND_5_/C

94.9 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 4
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

14._POUND_5_/C

94.9 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 5
 Dapeng Zhang, 2016

15._POUND_5_/C

94.9 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 6
 Dapeng Zhang, 2016

16._POUND_5_/C

94.9 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8408 11
 Dapeng Zhang, 2016

17._CRU_100 RUQ_877

94 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

18._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

19._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 2
 Dapeng Zhang, 2016

20._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 11
 Dapeng Zhang, 2016

21._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 4 > FP
 Dapeng Zhang, 2016

22._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 7 > FP
 Dapeng Zhang, 2016

23._POUND_2_/A

93.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1510 9 > FP
 Dapeng Zhang, 2016

24._POUND_2_/A GC-01-093-5-10

93.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

25._POUND_2_/A GC-01-093-5-10

93.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

26._POUND_2_/A GC-01-093-5-10

93.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

27._POUND_2_/A GC-01-093-5-10

93.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

28._POUND_2_/A GC-01-093-5-10

93.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

29._POUND_2_/A GC-01-093-5-10

93.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

30._POUND_2_/A

93.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A75 T3
 Dapeng Zhang, 2016

31._POUND_25_/A

93.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F406 T5
 Dapeng Zhang, 2016

32._EET_400_[ECU] GC-01-066-4-02

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

33._EET_400_[ECU] GC-01-066-4-02

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

34._EET_400_[ECU] GC-01-066-4-02

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

35._POUND_10_/B GC-01-115-6-12

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

36._POUND_10_/B GC-01-115-6-12

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

37._POUND_10_/B GC-08-162-4-05

92.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

38._EET_400_[ECU] GC-01-066-4-02

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

39._POUND_10_/B GC-01-115-6-12

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

40._POUND_10_/B GC-01-115-6-12

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

41._POUND_10_/B GC-08-163-4-06

92.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

42._POUND_10_/B GC-08-163-4-06

92.3 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

43._POUND_5_/C

92.1 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A77 T10
 Dapeng Zhang, 2016

44._EET_400_[ECU] GC-01-066-4-02

91.9 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

45._IMC_27 RUQ_515

91.7 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

46._NA_710 RUQ_1588

91.7 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._MARPER_38

90.7 %
27 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 167
 Dapeng Zhang, 2014

48._NA_916 RUQ_1334

90.7 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

49._NA_232 RUQ_1504

90.5 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240