SNP Profiles matching POUND 10 /B

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGGGTTTTCCTTTTCCCCAAGGCCGG
1._POUND_10
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
2._POUND_10_/B
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
3._EET_400_[ECU]
CCAAGGTTTT__TTTTCCCCAAGGCCGG
4._EET_400_[ECU]
CCAAGGTTTT__TTTTCCCCAAGGCCGG
5._EET_400_[ECU]
CCAAGGTTTT__TTTTCCCCAAGGCCGG
6._GC-01-066-4-02
CCAAGGTTTT__TTTTCCCCAAGGCCGG
7._GC-01-066-4-02
CCAAGGTTTT__TTTTCCCCAAGGCCGG
8._GC-01-066-4-02
CCAAGGTTTT__TTTTCCCCAAGGCCGG
9._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
10._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
11._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
12._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
13._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
14._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
15._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
16._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
17._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
18._GC-08-162-4-05
CCAAGGTTTT__TTTTCCCCAAGGCCGG
19._GC-08-163-4-06
CCAAGGTTTT__TTTTCCCCAAGGCCGG
20._GC-08-163-4-06
CCAAGGTTTT__TTTTCCCCAAGGCCGG
21._EET_400_[ECU]
CCAAGGTTTT__TTTTCCCCAAGGCCGG
22._GC-01-066-4-02
CCAAGGTTTT__TTTTCCCCAAGGCCGG
23._POUND_10_/B
CCAAGGTT____TTTTCCCCAAGGCCGG
24._GC-01-115-6-12
CCAAGGTT____TTTTCCCCAAGGCCGG
25._RUQ_1618
__AAGGTT______TT________CCGG
26._EET_400_[ECU]
CCAAGGTTTT__TTTTCCCCAAGGCCGG
27._GC-01-066-4-02
CCAAGGTTTT__TTTTCCCCAAGGCCGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTTTCGGGAACCAAGGTTCCCC
1._POUND_10
TTAAGGTTTTCGGGAACCAAGGTTCCCC
2._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
3._EET_400_[ECU]
TTAAGGTTTTCGGGAACCAAGGTTCCCC
4._EET_400_[ECU]
TTAAGGTTTTCGGGAACCAAGGTTCCCC
5._EET_400_[ECU]
TTAAGGTTTTCGGGAACCAAGGTTCCCC
6._GC-01-066-4-02
TTAAGGTTTTCGGGAACCAAGGTTCCCC
7._GC-01-066-4-02
TTAAGGTTTTCGGGAACCAAGGTTCCCC
8._GC-01-066-4-02
TTAAGGTTTTCGGGAACCAAGGTTCCCC
9._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
10._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
11._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
12._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
13._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
14._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
15._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
16._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
17._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
18._GC-08-162-4-05
TTAAGGTTTTCGGGAACCAAGGTTCCCC
19._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
20._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
21._EET_400_[ECU]
TTAAGGTTTTCGGGAACCAAGGTTCCCC
22._GC-01-066-4-02
TTAAGGTTTTCGGGAACCAAGGTTCCCC
23._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
24._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
25._RUQ_1618
________TTCGGG__CCAAGGTTCCCC
26._EET_400_[ECU]
TTAAGGTTTTCGGGAACCAAGGTTCCCC
27._GC-01-066-4-02
TTAAGGTTTTCGGGAACCAAGGTTCCCC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCGGCCAACCGGAATTGGX_XX_X
1._POUND_10
AAGGAACCGGCCAACCGGAATTGGX_XX_X
2._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
3._EET_400_[ECU]
AAGGAACCGGCCAACCGGAATTGGX_XX_X
4._EET_400_[ECU]
AAGGAACCGGCCAACCGGAATTGGX_XX_X
5._EET_400_[ECU]
AAGGAACCGGCCAACCGGAATTGGX_XX_X
6._GC-01-066-4-02
AAGGAACCGGCCAACCGGAATTGGX_XX_X
7._GC-01-066-4-02
AAGGAACCGGCCAACCGGAATTGGX_XX_X
8._GC-01-066-4-02
AAGGAACCGGCCAACCGGAATTGGX_XX_X
9._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
10._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
11._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
12._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
13._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
14._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
15._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
16._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
17._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
18._GC-08-162-4-05
AAGGAACCGGCCAACCGGAATTGGX_XX_X
19._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
20._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
21._EET_400_[ECU]
AAGGAACCGGCCAA__GGAATTGGX_XX_X
22._GC-01-066-4-02
AAGGAACCGGCCAA__GGAATTGGX_XX_X
23._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
24._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
25._RUQ_1618
AA__AACCGGCCAACCGGAA____X_XX_X
26._EET_400_[ECU]
AAGGAACCGGCCAACTGGAATTGGX_XX_X
27._GC-01-066-4-02
AAGGAACCGGCCAACTGGAATTGGX_XX_X

Input profile: POUND_10_/B RUQ_1618

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

1._POUND_10

98.8 %
40 shared markers

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Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P11 1146
 Dapeng Zhang, 2016

2._POUND_10_/B

98.8 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

3._EET_400_[ECU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1402 1 > FP
 Dapeng Zhang, 2016

4._EET_400_[ECU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1402 7
 Dapeng Zhang, 2016

5._EET_400_[ECU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1402 2
 Dapeng Zhang, 2016

6._EET_400_[ECU] GC-01-066-4-02

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

7._EET_400_[ECU] GC-01-066-4-02

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._EET_400_[ECU] GC-01-066-4-02

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

9._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

10._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

11._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

12._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

13._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

14._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

15._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

16._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

17._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

18._POUND_10_/B GC-08-162-4-05

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

19._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

21._EET_400_[ECU]

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1402 10 > F
 Dapeng Zhang, 2016

22._EET_400_[ECU] GC-01-066-4-02

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

23._POUND_10_/B

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016

24._POUND_10_/B GC-01-115-6-12

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._POUND_10_/B RUQ_1618

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

26._EET_400_[ECU]

97.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1402 5
 Dapeng Zhang, 2016

27._EET_400_[ECU] GC-01-066-4-02

97.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25