SNP Profiles matching OC 61 [VEN]

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 Key

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_Input profile
TTAAGGCTTTAACCTTCTTTAAAATTAG
1._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
2._GC-05-039-1-39
TTAAGGCTTTAACCTTCTTTAAAATTAG
3._GC-05-039-1-39
TTAAGGCTTTAACCTTCTTTAAAATTAG
4._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
5._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
6._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
7._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
8._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
9._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
10._OC_61_[VEN]
TTAAGGCTTTAACCTTCTTTAAAATTAG
11._GC-05-039-1-39
TTAAGGCTTTAACCTTCTTTAAAATTAG
12._GC-05-039-1-39
TTAAGGCTTTAACCTTCTTTAAAATTAG
13._GC-05-039-1-39
TTAAGGCTTTAACCTTCTTTAAAATTAG
14._GC-05-040-1-40
TTAAGGCTTTAACCTTCTTTAAAATTAG
15._GC-05-040-1-40
TTAAGGCTTTAACCTTCTTTAAAATTAG
16._GC-05-040-1-40
TTAAGGCTTTAACCTTCTTTAAAATTAG
17._GC-05-040-1-40
TTAAGGCTTTAACCTTCTTTAAAATTAG
18._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
19._MARPER_45
TTAAGGCT__AACC__CT__AAAA__AG
20._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
21._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
22._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
23._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
24._ICS_1
TTAAGGCTTTAACCTTCTTTAAAATTAG
25._NA
TTAAGGCTTTAACCTTCTTTAAAATTAG
26._NA
TTAAGGCTTTAACCTTCTTTAAAATTAG
27._NA
TTAAGGCTTTAACCTTCTTTAAAATTAG
28._NA
TTAAGGCTTTAACCTTCTTTAAAATTAG
29._NA
TTAAGGCTTTAACCTTCTTTAAAATTAG
30._PA_70_[PER]
TTAAGGCTTTAACCTTCTTTAAAATTAG
31._GC-04-053-3-17
TTAAGGCTTTAACCTTCTTTAAAATTAG
 1516171819202122232425262728
_Input profile
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
1._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
2._GC-05-039-1-39
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
3._GC-05-039-1-39
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
4._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
5._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
6._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
7._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
8._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
9._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
10._OC_61_[VEN]
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
11._GC-05-039-1-39
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
12._GC-05-039-1-39
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
13._GC-05-039-1-39
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
14._GC-05-040-1-40
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
15._GC-05-040-1-40
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
16._GC-05-040-1-40
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
17._GC-05-040-1-40
TTAAGGTTCCCGGGGGTTCCCCTTTTCC
18._ICS_1
TTAAGGTTCC__GTGGTTACCCTTTTCC
19._MARPER_45
TTAAGG__CC__GTGGTT__CC__TTCC
20._ICS_1
TTAAGGTTCCCGGTGGTTACCCTTTTCC
21._ICS_1
TTAAGGTTCCCGGTGGTTACCCTTTTCC
22._ICS_1
TTAAGGTTCCCGGTGGTTACCCTTTTCC
23._ICS_1
TTAAGGTTCCCGGTGGTTACCCTTTTCC
24._ICS_1
TTAAGGTTCCCGGTGGTTACCCTTTTCC
25._NA
TTAAGGTTCCCGGTGGTTACCCTTTTCC
26._NA
TTAAGGTTCCCGGTGGTTACCCTTTTCC
27._NA
TTAAGGTTCCCGGTGGTTACCCTTTTCC
28._NA
TTAAGGTTCCCGGTGGTTACCCTTTTCC
29._NA
TTAAGGTTCCCGGTGGTTACCCTTTTCC
30._PA_70_[PER]
TTAAGGTTCCCGGTGGTTACCCTTTTCC
31._GC-04-053-3-17
TTAAGGTTCCCGGTGGTTACCCTTTTCC
 293031323334353637383940  
_Input profile
AAGGAACCAGCGAACCTTACTTGGX_XX_X
1._OC_61_[VEN]
AAGGAACCAGCGAACCTTACTTGGX_XX_X
2._GC-05-039-1-39
AAGGAACCAGCGAACCTTACTTGGX_XX_X
3._GC-05-039-1-39
AAGGAACCAGCGAACCTTACTTGGX_XX_X
4._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
5._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
6._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
7._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
8._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
9._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
10._OC_61_[VEN]
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
11._GC-05-039-1-39
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
12._GC-05-039-1-39
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
13._GC-05-039-1-39
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
14._GC-05-040-1-40
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
15._GC-05-040-1-40
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
16._GC-05-040-1-40
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
17._GC-05-040-1-40
AAGGAACCAGCGAACCTTCCTTGGX_XX_X
18._ICS_1
__GGATCTAGCGAACCGTAAATGGX_XX_X
19._MARPER_45
AGGG__CTAG______GT__AT__X_XX_X
20._ICS_1
AGGGATCTAGCGAACCGTAAATGGX_XX_X
21._ICS_1
AGGGATCTAGCGAACCGTAAATGGX_XX_X
22._ICS_1
AGGGATCTAGCGAACCGTAAATGGX_XX_X
23._ICS_1
AGGGATCTAGCGAACCGTAAATGGX_XX_X
24._ICS_1
AGGGATCTAGCGAACCGTAAATGGX_XX_X
25._NA
AGGGATCTAGCGAACCGTAAATGGX_XX_X
26._NA
AGGGATCTAGCGAACCGTAAATGGX_XX_X
27._NA
AGGGATCTAGCGAACCGTAAATGGX_XX_X
28._NA
AGGGATCTAGCGAACCGTAAATGGX_XX_X
29._NA
AGGGATCTAGCGAACCGTAAATGGX_XX_X
30._PA_70_[PER]
AGGGATCTAGCGAACCGTAAATGGX_XX_X
31._GC-04-053-3-17
AGGGATCTAGCGAACCGTAAATGGX_XX_X

Input profile: OC_61_[VEN]

 
Mars Center for Cocoa Science, Brazil
Location: 5139 1 > FP
 Dapeng Zhang, 2016

1._OC_61_[VEN]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5139 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

2._OC_61_[VEN] GC-05-039-1-39

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

3._OC_61_[VEN] GC-05-039-1-39

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5139 5 > FP
 Dapeng Zhang, 2016

5._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5139 4 > FP
 Dapeng Zhang, 2016

6._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5139 3 > FP
 Dapeng Zhang, 2016

7._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5140 5 > FP
 Dapeng Zhang, 2016

8._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5140 4 > FP
 Dapeng Zhang, 2016

9._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5140 3 > FP
 Dapeng Zhang, 2016

10._OC_61_[VEN]

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5140 1 > FP
 Dapeng Zhang, 2016

11._OC_61_[VEN] GC-05-039-1-39

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

12._OC_61_[VEN] GC-05-039-1-39

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

13._OC_61_[VEN] GC-05-039-1-39

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP3
 Mars, 2018

14._OC_61_[VEN] GC-05-040-1-40

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

15._OC_61_[VEN] GC-05-040-1-40

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

16._OC_61_[VEN] GC-05-040-1-40

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

17._OC_61_[VEN] GC-05-040-1-40

98.8 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

18._ICS_1

90.8 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block4
 Dapeng Zhang, 2016

19._MARPER_45

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 251A
 Dapeng Zhang, 2014

20._ICS_1

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8903 8
 Dapeng Zhang, 2016

21._ICS_1

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8903 6
 Dapeng Zhang, 2016

22._ICS_1

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8903 5
 Dapeng Zhang, 2016

23._ICS_1

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8903 3
 Dapeng Zhang, 2016

24._ICS_1

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8903 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

25._ICS_1 NA

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

26._ICS_1 NA

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

27._ICS_1 NA

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

28._ICS_1 NA

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

29._ICS_1 NA

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

30._PA_70_[PER]

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 4317 2 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

31._PA_70_[PER] GC-04-053-3-17

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1 (roxo)
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25