SNP Profiles matching MO 9

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 Key

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_Input profile
CTAACGTTCTACCCGTCTCTAAAGCTAG
1._DOM_5
CTAACGTTCTACCCGTCTCTAAAGCTAG
2._DOM_5
CTAACGTTCTACCCGTCTCTAAAGCTAG
3._DOM_5
CTAACGTTCTACCCGTCTCTAAAGCTAG
4._DOM_5
CTAACGTTCTACCCGTCTCTAAAGCTAG
5._DOM_5
CTAACGTTCTACCCGTCTCTAAAGCTAG
6._GC-08-053-1-64
CTAACGTTCTACCCGTCTCTAAAGCTAG
7._GC-08-053-1-64
CTAACGTTCTACCCGTCTCTAAAGCTAG
8._GC-08-053-1-64
CTAACGTTCTACCCGTCTCTAAAGCTAG
9._GC-08-053-1-64
CTAACGTTCTACCCGTCTCTAAAGCTAG
10._GC-08-053-1-64
CTAACGTTCTACCCGTCTCTAAAGCTAG
11._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
12._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
13._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
14._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
15._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
16._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
17._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
18._IMC_47
CTAACGTTCTACCCGTCTCTAAAGCTAG
19._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
20._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
21._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
22._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
23._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
24._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
25._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
26._GC-08-103-3-02
CTAACGTTCTACCCGTCTCTAAAGCTAG
27._MO_9
CTAACGTTCTACCCGTCTCTAAAGCTAG
28._MO_9
CTAACGTTCTACCCGTCTCTAAAGCTAG
29._MO_9
CTAACGTTCTACCCGTCTCTAAAGCTAG
30._GC-05-071-2-22
CTAACGTTCTACCCGTCTCTAAAGCTAG
31._GC-05-071-2-22
CTAACGTTCTACCCGTCTCTAAAGCTAG
32._GC-05-071-2-22
CTAACGTTCTACCCGTCTCTAAAGCTAG
33._GC-05-119-3-21
CTAACGTTCTACCCGTCTCTAAAGCTAG
34._IMC_47
_AACGTTCTACCCGTCTCTAAAGCTAG
35._GC-08-103-3-02
_AACGTTCTACCCGTCTCTAAAGCTAG
36._MO_9
CTAACGTTCTACCCGTCTCT_AGCTAG
37._GC-05-071-2-22
CTAACGTTCTACCCGTCTCT_AGCTAG
 1516171819202122232425262728
_Input profile
CTATCGCTCTCCGTAATTACCGGTCTAC
1._DOM_5
CTATCGCTCTCCGTAATTACCGGTCTAC
2._DOM_5
CTATCGCTCTCCGTAATTACCGGTCTAC
3._DOM_5
CTATCGCTCTCCGTAATTACCGGTCTAC
4._DOM_5
CTATCGCTCTCCGTAATTACCGGTCTAC
5._DOM_5
CTATCGCTCTCCGTAATTACCGGTCTAC
6._GC-08-053-1-64
CTATCGCTCTCCGTAATTACCGGTCTAC
7._GC-08-053-1-64
CTATCGCTCTCCGTAATTACCGGTCTAC
8._GC-08-053-1-64
CTATCGCTCTCCGTAATTACCGGTCTAC
9._GC-08-053-1-64
CTATCGCTCTCCGTAATTACCGGTCTAC
10._GC-08-053-1-64
CTATCGCTCTCCGTAATTACCGGTCTAC
11._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
12._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
13._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
14._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
15._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
16._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
17._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
18._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
19._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
20._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
21._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
22._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
23._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
24._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
25._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
26._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
27._MO_9
CTATCGCTCTCCGTAATTACCGGTCTAC
28._MO_9
CTATCGCTCTCCGTAATTACCGGTCTAC
29._MO_9
CTATCGCTCTCCGTAATTACCGGTCTAC
30._GC-05-071-2-22
CTATCGCTCTCCGTAATTACCGGTCTAC
31._GC-05-071-2-22
CTATCGCTCTCCGTAATTACCGGTCTAC
32._GC-05-071-2-22
CTATCGCTCTCCGTAATTACCGGTCTAC
33._GC-05-119-3-21
CTATCGCTCTCCGTAATTACCGGTCTAC
34._IMC_47
CTATCGCTCTCCGTAATTACCGGTCTAC
35._GC-08-103-3-02
CTATCGCTCTCCGTAATTACCGGTCTAC
36._MO_9
CTATCGCTCTCCGTAATTACCGGTCTAC
37._GC-05-071-2-22
CTATCGCTCTCCGTAATTACCGGTCTAC
 293031323334353637383940  
_Input profile
AGAGATCTAGCGACCTGGAAATCGX_XX_X
1._DOM_5
AGAGATCTAGCGACCTGGAAATCGX_XX_X
2._DOM_5
AGAGATCTAGCGACCTGGAAATCGX_XX_X
3._DOM_5
AGAGATCTAGCGACCTGGAAATCGX_XX_X
4._DOM_5
AGAGATCTAGCGACCTGGAAATCGX_XX_X
5._DOM_5
AGAGATCTAGCGACCTGGAAATCGX_XX_X
6._GC-08-053-1-64
AGAGATCTAGCGACCTGGAAATCGX_XX_X
7._GC-08-053-1-64
AGAGATCTAGCGACCTGGAAATCGX_XX_X
8._GC-08-053-1-64
AGAGATCTAGCGACCTGGAAATCGX_XX_X
9._GC-08-053-1-64
AGAGATCTAGCGACCTGGAAATCGX_XX_X
10._GC-08-053-1-64
AGAGATCTAGCGACCTGGAAATCGX_XX_X
11._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
12._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
13._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
14._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
15._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
16._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
17._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
18._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
19._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
20._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
21._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
22._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
23._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
24._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
25._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
26._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
27._MO_9
AGAGATCTAGCGACCTGGAAATCGX_XX_X
28._MO_9
AGAGATCTAGCGACCTGGAAATCGX_XX_X
29._MO_9
AGAGATCTAGCGACCTGGAAATCGX_XX_X
30._GC-05-071-2-22
AGAGATCTAGCGACCTGGAAATCGX_XX_X
31._GC-05-071-2-22
AGAGATCTAGCGACCTGGAAATCGX_XX_X
32._GC-05-071-2-22
AGAGATCTAGCGACCTGGAAATCGX_XX_X
33._GC-05-119-3-21
AGAGATCTAGCGACCTGGAAATCGX_XX_X
34._IMC_47
AGAGATCTAGCGACCTGGAAATCGX_XX_X
35._GC-08-103-3-02
AGAGATCTAGCGACCTGGAAATCGX_XX_X
36._MO_9
AGAGATCTAGCGACCTGGAAATCGX_XX_X
37._GC-05-071-2-22
AGAGATCTAGCGACCTGGAAATCGX_XX_X

Input profile: MO_9

 
Mars Center for Cocoa Science, Brazil
Location: 5222 2 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

1._DOM_5

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8164 6
 Dapeng Zhang, 2016

2._DOM_5

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8164 4
 Dapeng Zhang, 2016

3._DOM_5

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8164 3
 Dapeng Zhang, 2016

4._DOM_5

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8164 2
 Dapeng Zhang, 2016

5._DOM_5

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8164 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

6._DOM_5 GC-08-053-1-64

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._DOM_5 GC-08-053-1-64

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._DOM_5 GC-08-053-1-64

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._DOM_5 GC-08-053-1-64

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._DOM_5 GC-08-053-1-64

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: Dead
 Mars, 2018

11._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 6 > FP
 Dapeng Zhang, 2016

12._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 5 > FP
 Dapeng Zhang, 2016

13._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 3 > FP
 Dapeng Zhang, 2016

14._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 1 > FP
 Dapeng Zhang, 2016

15._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 12
 Dapeng Zhang, 2016

16._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 11
 Dapeng Zhang, 2016

17._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 10
 Dapeng Zhang, 2016

18._IMC_47

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 4
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

19._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

20._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

21._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

22._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP3
 Mars, 2018

23._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP4
 Mars, 2018

24._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

25._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

26._IMC_47 GC-08-103-3-02

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

27._MO_9

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5321 5
 Dapeng Zhang, 2016

28._MO_9

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 4 > FP
 Dapeng Zhang, 2016

29._MO_9

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 3 > FP
 Dapeng Zhang, 2016

30._MO_9 GC-05-071-2-22

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

31._MO_9 GC-05-071-2-22

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

32._MO_9 GC-05-071-2-22

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP4
 Mars, 2018

33._MO_9 GC-05-119-3-21

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

34._IMC_47

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8302 7
 Dapeng Zhang, 2016

35._IMC_47 GC-08-103-3-02

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

36._MO_9

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5222 2 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

37._MO_9 GC-05-071-2-22

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25