SNP Profiles matching GU 221 /H

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 Key

 1234567891011121314
_Input profile
CCAGCCCCTTAATTGTTTCCATGGCCAA
1._GC-01-074-4-10
CCAGCCCCTTAATTGTTTCCATGGCCAA
2._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
3._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
4._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
5._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
6._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
7._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
8._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
9._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
10._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
11._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
12._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
13._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
14._GC-03-026-2-15
CCAGCCCCTT__TTGTTTCCATGGCCAA
15._GC-03-026-2-15
CCAGCCCCTTAATTGTTTCCATGGCCAA
16._RUQ_1495
__AGCCCC______GT________CCAA
 1516171819202122232425262728
_Input profile
CCTTCGCTTTCCGGAATTCCGGGGCCAC
1._GC-01-074-4-10
CCTTCGCTTTCCGGAATTCCGGGGCCAC
2._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
3._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
4._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
5._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
6._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
7._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
8._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
9._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
10._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
11._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
12._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
13._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
14._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
15._GC-03-026-2-15
CCTTCGCTTTCCGGAATTCCGGGGCCAC
16._RUQ_1495
________TTCCGG__TTCCGGGGCCAA
 293031323334353637383940  
_Input profile
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
1._GC-01-074-4-10
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
2._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
3._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
4._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
5._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
6._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
7._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
8._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
9._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
10._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
11._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
12._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
13._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
14._GC-03-026-2-15
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
15._GC-03-026-2-15
GGGG__TTGGCGCCTTGGACAAGGX_XX_X
16._RUQ_1495
GG__AACTGGCGCCTTGGAA____X_XX_X

Input profile: GU_221_/H

 
Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 4 > FP
 Dapeng Zhang, 2016

1._GU_221_/H GC-01-074-4-10

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

2._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

3._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

5._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

7._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

8._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

9._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

10._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

11._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

12._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

13._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

14._U_54_[PER] GC-03-026-2-15

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

15._U_54_[PER] GC-03-026-2-15

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

16._U_45_[PER] RUQ_1495

93.8 %
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25