SNP Profiles matching EQX 0

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
1._EQX_/O_[CHA]	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
2._EQX_/O_[CHA]	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
3._EQX_/O_[CHA]	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
4._GC-07-077-4-21	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
5._GC-07-077-4-21	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
6._GC-07-087-5-22	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
7._GC-07-087-5-22	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
8._MARPER_45	TT	AA	GG	CT	__	AA	CC	__	CT	__	AA	AA	__	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
1._EQX_/O_[CHA]	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
2._EQX_/O_[CHA]	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
3._EQX_/O_[CHA]	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
4._GC-07-077-4-21	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
5._GC-07-077-4-21	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
6._GC-07-087-5-22	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
7._GC-07-087-5-22	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
8._MARPER_45	TT	AA	GG	__	CC	__	GT	GG	TT	__	CC	__	TT	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
1._EQX_/O_[CHA]	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
2._EQX_/O_[CHA]	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
3._EQX_/O_[CHA]	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
4._GC-07-077-4-21	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
5._GC-07-077-4-21	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
6._GC-07-087-5-22	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
7._GC-07-087-5-22	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
8._MARPER_45	AG	GG	__	CT	AG	__	__	__	GT	__	AT	__	X_X	X_X

Input profile: EQX_/O_[CHA]

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7522 2 > FP

Dapeng Zhang, 2016

1._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7522 4 > FP

Dapeng Zhang, 2016

2._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7421 3

Dapeng Zhang, 2016

3._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7421 1

Dapeng Zhang, 2016

4._EQX_/O_[CHA] GC-07-077-4-21

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

5._EQX_/O_[CHA] GC-07-077-4-21

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

6._EQX_/O_[CHA] GC-07-087-5-22

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

7._EQX_/O_[CHA] GC-07-087-5-22

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

8._MARPER_45

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 251A

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25