SNP Profiles matching PA 53 [PER]

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 Key

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_Input profile
GGATCCGGCCACAACCAAGGAAAACCGT
1._PA_52_[PER]
GGATACGGCCACAACCAAGGAAAACCGT
2._PA_128_[PER]
GGATACGGCCACAGCCAAGGAAAACCGT
3._PA_289_[PER]
GGATCCGGCTACAACCAAGGAAAACCGT
 1516171819202122232425262728
_Input profile
CGACTTAATTGGCCCCCTCGAACCAACC
1._PA_52_[PER]
CGCCTTAATTGGCCCCCC-AA-AACC
2._PA_128_[PER]
CGCCTTAATTGGCCCCCCCGAACCAGCC
3._PA_289_[PER]
GGCCTTAATTGGCCCCTTCGAATTAACC
 293031323334353637383940  
_Input profile
GGAACCCCTTCCCCTTCTGGGGCCX_XX_X
1._PA_52_[PER]
GGAA-CCTTCT-TTCTGGGGCCX_XX_X
2._PA_128_[PER]
AGAACCCCTTCTCCTTCTGGGGCCX_XX_X
3._PA_289_[PER]
GGAACCCCTTTTCCTTCTGGGGCCX_XX_X

Input profile: PA_53_[PER]

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 243
 Dapeng Zhang, 2014

1._PA_52_[PER]

94.4 %
36 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D310 T8
 Dapeng Zhang, 2014

2._PA_128_[PER]

91.3 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D272 T2
 Dapeng Zhang, 2014

3._PA_289_[PER]

90 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER C 803
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP591 17TcSNP619 18TcSNP645 19TcSNP836 20TcSNP872
21TcSNP878 22TcSNP891 23TcSNP917 24TcSNP929 25TcSNP953
26TcSNP994 27TcSNP998 28TcSNP1060 29TcSNP1062 30TcSNP1075
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1484 40TcSNP1520